Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00516 Erythranthe guttata HOM05D003750 ORTHO05D004337 1.1e-107 394.0 318 100.0
Migut.H02092 Erythranthe guttata HOM05D003750 ORTHO05D004337 1.5e-45 187.6 121 70.2
Peaxi162Scf00807g00024 Petunia axillaris HOM05D003750 ORTHO05D004337 2.6e-45 186.8 119 73.1
PGSC0003DMG400007796 Solanum tuberosum HOM05D003750 ORTHO05D004337 7.5e-45 185.3 119 72.3
SGA_v2.0_scaffold70G23672 Striga asiatica HOM05D003750 ORTHO05D004337 7.5e-45 185.3 323 48.3
Cc05_g09310 Coffea canephora HOM05D003750 ORTHO05D004337 2.2e-44 183.7 325 52.6
Nitab4.5_0006934g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 4.8e-44 182.6 119 72.3
CANSAT64G2056 Cannabis sativa HOM05D003750 ORTHO05D004337 8.3e-44 181.8 124 69.4
Solyc12g011010.2 Solanum lycopersicum HOM05D003750 ORTHO05D004337 8.3e-44 181.8 119 72.3
Nitab4.5_0000446g0080 Nicotiana tabacum HOM05D003750 ORTHO05D004337 2.4e-43 180.3 119 70.6
PGR142G2515 Punica granatum HOM05D003750 ORTHO05D004337 3.1e-43 179.9 123 71.5
MSTRG.15053 Avicennia marina HOM05D003750 ORTHO05D004337 1.6e-42 177.6 324 57.4
Sopen12g006370 Solanum pennellii HOM05D003750 ORTHO05D004337 2.7e-42 176.8 120 72.5
Peaxi162Scf00688g00432 Petunia axillaris HOM05D003750 ORTHO05D004337 4.5e-42 176.0 319 53.3
Nitab4.5_0001675g0060 Nicotiana tabacum HOM05D003750 ORTHO05D004337 7.7e-42 175.3 320 46.9
Potri.002G060800 Populus trichocarpa HOM05D003750 ORTHO05D004337 7.7e-42 175.3 317 44.2
CSS0030446 Camellia sinensis var. sinensis HOM05D003750 ORTHO05D004337 2.2e-41 173.7 122 68.0
Haze_13489 Corylus avellana HOM05D003750 ORTHO05D004337 2.9e-41 173.3 119 70.6
Oeu020066.1 Olea europaea HOM05D003750 ORTHO05D004337 2.9e-41 173.3 119 72.3
vmacro12451 Vaccinium macrocarpon HOM05D003750 ORTHO05D004337 3.8e-41 172.9 122 68.0
Cfa022914 Carpinus fangiana HOM05D003750 ORTHO05D004337 5.0e-41 172.6 122 68.9
Nitab4.5_0013539g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.1e-40 171.4 318 48.4
Sopen10g003700 Solanum pennellii HOM05D003750 ORTHO05D004337 1.5e-40 171.0 117 69.2
Solyc10g007800.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 2.5e-40 170.2 117 69.2
HanXRQChr06g0171371 Helianthus annuus HOM05D003750 ORTHO05D004337 3.2e-40 169.9 120 66.7
Lsat_1_v5_gn_3_35901 Lactuca sativa HOM05D003750 ORTHO05D004337 3.2e-40 169.9 123 66.7
PGSC0003DMG400021281 Solanum tuberosum HOM05D003750 ORTHO05D004337 3.2e-40 169.9 116 70.7
FAN05G3098 Fragaria x ananassa HOM05D003750 ORTHO05D004337 5.5e-40 169.1 117 70.1
Prupe.3G171000 Prunus persica HOM05D003750 ORTHO05D004337 5.5e-40 169.1 310 51.3
Actinidia11198 Actinidia chinensis HOM05D003750 ORTHO05D004337 7.2e-40 168.7 122 64.8
Nitab4.5_0002027g0180 Nicotiana tabacum HOM05D003750 ORTHO05D004337 9.4e-40 168.3 117 68.4
Rhsim06G0118400 Rhododendron simsii HOM05D003750 ORTHO05D004337 9.4e-40 168.3 116 68.1
Sabra02G0049300 Salix brachista HOM05D003750 ORTHO05D004337 9.4e-40 168.3 116 69.8
unitig_899.g15337 Utricularia gibba HOM05D003750 ORTHO05D004337 1.2e-39 167.9 122 66.4
FAN02G2641 Fragaria x ananassa HOM05D003750 ORTHO05D004337 2.7e-39 166.8 115 70.4
TWI14G1010 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 3.6e-39 166.4 122 67.2
MSTRG.6755 Avicennia marina HOM05D003750 ORTHO05D004337 6.1e-39 165.6 121 70.2
unitig_46.g18277 Utricularia gibba HOM05D003750 ORTHO05D004337 6.1e-39 165.6 117 67.5
Nitab4.5_0001402g0030 Nicotiana tabacum HOM05D003750 ORTHO05D004337 8.0e-39 165.2 117 67.5
Manes.01G128300 Manihot esculenta HOM05D003750 ORTHO05D004337 1.0e-38 164.9 116 68.1
RcHm_v2.0_Chr2g0151161 Rosa chinensis HOM05D003750 ORTHO05D004337 1.4e-38 164.5 117 67.5
FvH4_6g38100 Fragaria vesca HOM05D003750 ORTHO05D004337 1.8e-38 164.1 115 69.6
FAN14G5523 Fragaria x ananassa HOM05D003750 ORTHO05D004337 1.8e-38 164.1 115 69.6
MD09G1154000 Malus domestica HOM05D003750 ORTHO05D004337 1.8e-38 164.1 117 69.2
TWI59G1023 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 1.8e-38 164.1 122 67.2
Eucgr.K01198 Eucalyptus grandis HOM05D003750 ORTHO05D004337 2.3e-38 163.7 117 67.5
Gohir.D04G037100 Gossypium hirsutum HOM05D003750 ORTHO05D004337 2.3e-38 163.7 123 65.9
SalBow7G1469 Salvia bowleyana HOM05D003750 ORTHO05D004337 2.3e-38 163.7 124 66.1
CAN.G164.22 Capsicum annuum HOM05D003750 ORTHO05D004337 3.0e-38 163.3 288 48.3
Sabra05G0152900 Salix brachista HOM05D003750 ORTHO05D004337 3.0e-38 163.3 122 66.4
unitig_37.g12854 Utricularia gibba HOM05D003750 ORTHO05D004337 3.0e-38 163.3 111 69.4
CiPaw.03G189300 Carya illinoinensis HOM05D003750 ORTHO05D004337 4.0e-38 162.9 117 66.7
Gohir.A05G378400 Gossypium hirsutum HOM05D003750 ORTHO05D004337 4.0e-38 162.9 123 65.9
Gorai.012G041900 Gossypium raimondii HOM05D003750 ORTHO05D004337 6.8e-38 162.2 123 65.0
Cpa.g.sc50.77 Carica papaya HOM05D003750 ORTHO05D004337 8.8e-38 161.8 120 65.0
COL.COLO4_33737 Corchorus olitorius HOM05D003750 ORTHO05D004337 8.8e-38 161.8 325 54.2
Solyc07g055950.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 8.8e-38 161.8 113 68.1
Duzib264G0293 Durio zibethinus HOM05D003750 ORTHO05D004337 1.5e-37 161.0 108 71.3
arahy.Tifrunner.gnm1.ann1.Y7JGW6 Arachis hypogaea HOM05D003750 ORTHO05D004337 2.0e-37 160.6 124 62.9
arahy.Tifrunner.gnm1.ann1.UWZ29M Arachis hypogaea HOM05D003750 ORTHO05D004337 2.6e-37 160.2 124 62.9
Phvul.006G033900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 2.6e-37 160.2 117 65.8
Lalb_Chr04g0248731 Lupinus albus HOM05D003750 ORTHO05D004337 3.4e-37 159.8 119 64.7
MD17G1140600 Malus domestica HOM05D003750 ORTHO05D004337 3.4e-37 159.8 327 47.1
Sopen07g029310 Solanum pennellii HOM05D003750 ORTHO05D004337 3.4e-37 159.8 113 67.3
CAN.G585.54 Capsicum annuum HOM05D003750 ORTHO05D004337 4.4e-37 159.5 318 48.1
ClCG09G022350 Citrullus lanatus HOM05D003750 ORTHO05D004337 4.4e-37 159.5 123 61.0
SalBow7G0202 Salvia bowleyana HOM05D003750 ORTHO05D004337 4.4e-37 159.5 123 64.2
Ca_27365_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 5.7e-37 159.1 123 60.2
Potri.005G200900 Populus trichocarpa HOM05D003750 ORTHO05D004337 5.7e-37 159.1 327 51.4
Glyma.08G309700 Glycine max HOM05D003750 ORTHO05D004337 9.8e-37 158.3 118 63.6
QL08p043924 Quercus lobata HOM05D003750 ORTHO05D004337 9.8e-37 158.3 117 65.8
Duzib187G0136 Durio zibethinus HOM05D003750 ORTHO05D004337 1.3e-36 157.9 123 64.2
THA.LOC104803179 Tarenaya hassleriana HOM05D003750 ORTHO05D004337 1.3e-36 157.9 124 62.1
Ciclev10032169m.g Citrus clementina HOM05D003750 ORTHO05D004337 1.7e-36 157.5 121 66.1
Lalb_Chr10g0106741 Lupinus albus HOM05D003750 ORTHO05D004337 2.2e-36 157.1 119 63.0
Atru.chr6.1510 Acer truncatum HOM05D003750 ORTHO05D004337 2.8e-36 156.8 114 65.8
CARHR137920 Cardamine hirsuta HOM05D003750 ORTHO05D004337 2.8e-36 156.8 121 64.5
CAN.G1191.4 Capsicum annuum HOM05D003750 ORTHO05D004337 3.7e-36 156.4 110 69.1
Glyma.18G106400 Glycine max HOM05D003750 ORTHO05D004337 3.7e-36 156.4 110 65.5
Lalb_Chr17g0348311 Lupinus albus HOM05D003750 ORTHO05D004337 3.7e-36 156.4 120 62.5
Oeu040027.1 Olea europaea HOM05D003750 ORTHO05D004337 3.7e-36 156.4 109 71.6
AT2G42840 Arabidopsis thaliana HOM05D003750 ORTHO05D004337 6.3e-36 155.6 124 63.7
Glyma.14G027551 Glycine max HOM05D003750 ORTHO05D004337 6.3e-36 155.6 117 64.1
MELO3C019689.2 Cucumis melo HOM05D003750 ORTHO05D004337 8.3e-36 155.2 110 65.5
Glyma.02G287400 Glycine max HOM05D003750 ORTHO05D004337 8.3e-36 155.2 120 62.5
BcaNung06740 Brassica carinata HOM05D003750 ORTHO05D004337 1.1e-35 154.8 121 62.0
A05p03190 Brassica napus HOM05D003750 ORTHO05D004337 1.1e-35 154.8 121 62.0
C04p03840 Brassica napus HOM05D003750 ORTHO05D004337 1.1e-35 154.8 121 62.0
BolC4t22020H Brassica oleracea HOM05D003750 ORTHO05D004337 1.1e-35 154.8 121 62.0
BraA05t19309Z Brassica rapa HOM05D003750 ORTHO05D004337 1.1e-35 154.8 121 62.0
Psat2g014640 Pisum sativum HOM05D003750 ORTHO05D004337 1.1e-35 154.8 120 60.8
PGSC0003DMG400017342 Solanum tuberosum HOM05D003750 ORTHO05D004337 1.1e-35 154.8 317 49.5
ECA246G0286 Erigeron canadensis HOM05D003750 ORTHO05D004337 1.8e-35 154.1 108 67.6
Sed0013297 Sechium edule HOM05D003750 ORTHO05D004337 1.8e-35 154.1 109 65.1
Duzib147G0801 Durio zibethinus HOM05D003750 ORTHO05D004337 2.4e-35 153.7 107 68.2
DCAR_021309 Daucus carota HOM05D003750 ORTHO05D004337 3.1e-35 153.3 122 64.8
Thecc.01G160900 Theobroma cacao HOM05D003750 ORTHO05D004337 3.1e-35 153.3 108 66.7
unitig_62.g23108 Utricularia gibba HOM05D003750 ORTHO05D004337 3.1e-35 153.3 118 60.2
AL4G41450 Arabidopsis lyrata HOM05D003750 ORTHO05D004337 4.1e-35 152.9 121 62.8
CsaV3_6G015810 Cucumis sativus L. HOM05D003750 ORTHO05D004337 4.1e-35 152.9 110 64.5
unitig_747.g21612 Utricularia gibba HOM05D003750 ORTHO05D004337 5.4e-35 152.5 310 42.9
Carub.0004s2528 Capsella rubella HOM05D003750 ORTHO05D004337 7.0e-35 152.1 121 64.5
BcaB06g29267 Brassica carinata HOM05D003750 ORTHO05D004337 1.2e-34 151.4 128 62.5
Thhalv10016927m.g Eutrema salsugineum HOM05D003750 ORTHO05D004337 1.6e-34 151.0 121 62.0
Lj6g0002200 Lotus japonicus HOM05D003750 ORTHO05D004337 1.6e-34 151.0 109 63.3
Lalb_Chr20g0108881 Lupinus albus HOM05D003750 ORTHO05D004337 1.6e-34 151.0 117 61.5
Dinv12695 Davidia involucrata HOM05D003750 ORTHO05D004337 2.0e-34 150.6 112 67.0
CsaV3_6G038000 Cucumis sativus L. HOM05D003750 ORTHO05D004337 2.7e-34 150.2 109 60.6
DCAR_016898 Daucus carota HOM05D003750 ORTHO05D004337 3.5e-34 149.8 122 60.7
Sc15g0002430 Simmondsia chinensis HOM05D003750 ORTHO05D004337 3.5e-34 149.8 120 59.2
Phvul.008G190900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 4.5e-34 149.4 120 59.2
TPR.G12519 Trifolium pratense HOM05D003750 ORTHO05D004337 5.9e-34 149.1 117 59.0
BcaC02g07218 Brassica carinata HOM05D003750 ORTHO05D004337 7.7e-34 148.7 121 63.6
A04p32410 Brassica napus HOM05D003750 ORTHO05D004337 7.7e-34 148.7 121 63.6
C04p69930 Brassica napus HOM05D003750 ORTHO05D004337 7.7e-34 148.7 121 63.6
BolC4t28493H Brassica oleracea HOM05D003750 ORTHO05D004337 7.7e-34 148.7 121 63.6
BraA04t18694Z Brassica rapa HOM05D003750 ORTHO05D004337 7.7e-34 148.7 121 63.6
LjContig00310g0001182 Lotus japonicus HOM05D003750 ORTHO05D004337 7.7e-34 148.7 120 59.2
Sed0024619 Sechium edule HOM05D003750 ORTHO05D004337 1.0e-33 148.3 123 57.7
VMungo0647G1422 Vigna mungo HOM05D003750 ORTHO05D004337 1.0e-33 148.3 119 59.7
DCAR_009794 Daucus carota HOM05D003750 ORTHO05D004337 1.7e-33 147.5 124 58.9
Sed0014259 Sechium edule HOM05D003750 ORTHO05D004337 2.3e-33 147.1 111 62.2
TAR626G1101 Trochodendron aralioides HOM05D003750 ORTHO05D004337 2.9e-33 146.7 322 48.8
Aa31LG1G24600 Aethionema arabicum HOM05D003750 ORTHO05D004337 6.6e-33 145.6 321 53.3
MELO3C014462.2 Cucumis melo HOM05D003750 ORTHO05D004337 6.6e-33 145.6 120 56.7
Medtr3g089570 Medicago truncatula HOM05D003750 ORTHO05D004337 6.6e-33 145.6 111 60.4
Sp4g24960 Schrenkiella parvula HOM05D003750 ORTHO05D004337 1.1e-32 144.8 121 62.0
arahy.Tifrunner.gnm1.ann1.ZP8MLZ Arachis hypogaea HOM05D003750 ORTHO05D004337 1.5e-32 144.4 120 62.5
VMungo0540G2251 Vigna mungo HOM05D003750 ORTHO05D004337 1.9e-32 144.1 327 42.8
ClCG02G018380 Citrullus lanatus HOM05D003750 ORTHO05D004337 7.2e-32 142.1 329 37.4
Nn6g34390 Nelumbo nucifera HOM05D003750 ORTHO05D004337 9.5e-32 141.7 121 57.0
arahy.Tifrunner.gnm1.ann1.N94NTJ Arachis hypogaea HOM05D003750 ORTHO05D004337 1.2e-31 141.4 107 63.6
Peaxi162Scf00035g00302 Petunia axillaris HOM05D003750 ORTHO05D004337 1.2e-31 141.4 107 65.4
Psat0s4925g0080 Pisum sativum HOM05D003750 ORTHO05D004337 1.2e-31 141.4 318 43.4
TAR624G1252 Trochodendron aralioides HOM05D002606 ORTHO05D003016 3.6e-31 139.8 125 56.8
Hund08216 Selenicereus undatus HOM05D003750 ORTHO05D004337 8.0e-31 138.7 119 58.0
Lsat_1_v5_gn_4_26620 Lactuca sativa HOM05D003750 ORTHO05D004337 1.0e-30 138.3 123 60.2
Nn3g20965 Nelumbo nucifera HOM05D003750 ORTHO05D004337 3.0e-30 136.7 124 55.6
Lalb_Chr19g0137861 Lupinus albus HOM05D003750 ORTHO05D004337 6.8e-30 135.6 318 41.8
unitig_85.g27387 Utricularia gibba HOM05D003750 ORTHO05D004337 1.2e-29 134.8 117 59.8
Os01g0726700 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 1.5e-29 134.4 119 55.5
TPR.G16759 Trifolium pratense HOM05D003750 ORTHO05D004337 1.5e-29 134.4 106 61.3
Aqoxy4G00176 Aquilegia oxysepala HOM05D003750 ORTHO05D004337 2.0e-29 134.0 113 59.3
MBI07_g30204_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 9.8e-29 131.7 116 59.5
Ah.01g013400 Amaranthus hybridus HOM05D003750 ORTHO05D004337 4.9e-28 129.4 106 59.4
Ah.01g001950 Amaranthus hybridus HOM05D003750 ORTHO05D004337 1.4e-27 127.9 113 54.9
AUR62015148 Chenopodium quinoa HOM05D003750 ORTHO05D004337 3.1e-27 126.7 106 58.5
Eucgr.A01963 Eucalyptus grandis HOM05D003750 ORTHO05D004337 7.0e-27 125.6 123 57.7
MBI06_g20684_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 7.0e-27 125.6 119 53.8
PSO675G0845 Papaver somniferum HOM05D003750 ORTHO05D004337 1.3e-25 121.3 126 51.6
HPP92_009096 Vanilla planifolia HOM05D003750 ORTHO05D004337 1.3e-25 121.3 109 54.1
PSO541G0678 Papaver somniferum HOM05D003750 ORTHO05D004337 2.3e-25 120.6 126 51.6
EL10Ac9g22858 Beta vulgaris HOM05D003750 ORTHO05D004337 2.9e-25 120.2 104 57.7
CDE09G1130 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 5.0e-25 119.4 117 49.6
Ca_06287_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 5.0e-25 119.4 92 65.2
Glyma.02G280550 Glycine max HOM05D003750 ORTHO05D004337 1.5e-24 117.9 106 55.7
HanXRQChr17g0565481 Helianthus annuus HOM05D003750 ORTHO05D004337 7.3e-24 115.5 109 56.0
HanXRQChr17g0565411 Helianthus annuus HOM05D003750 ORTHO05D004337 1.2e-23 114.8 111 55.0
ATR0737G120 Amborella trichopoda HOM05D003750 ORTHO05D004337 2.1e-23 114.0 108 51.9
HanXRQChr17g0565191 Helianthus annuus HOM05D003750 ORTHO05D004337 3.6e-23 113.2 111 54.1
HanXRQChr17g0565441 Helianthus annuus HOM05D003750 ORTHO05D004337 3.6e-23 113.2 111 54.1
HanXRQChr17g0565471 Helianthus annuus HOM05D003750 ORTHO05D004337 3.6e-23 113.2 111 54.1
Zm00001eb154370 Zea mays HOM05D003750 ORTHO05D004337 6.1e-23 112.5 116 50.9
CDE02G2915 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 1.2e-21 108.2 106 50.0
HanXRQChr01g0028591 Helianthus annuus HOM05D003750 ORTHO05D004337 1.5e-21 107.8 125 48.8
AUR62017604 Chenopodium quinoa HOM05D003750 ORTHO05D004337 3.4e-21 106.7 92 56.5
ECA234G0795 Erigeron canadensis HOM05D001021 ORTHO05D000894 7.5e-21 105.5 110 51.8
Zm00001eb239390 Zea mays HOM05D003750 ORTHO05D004337 6.0e-18 95.9 107 47.7
Zm00001eb278420 Zea mays HOM05D003750 ORTHO05D004337 1.5e-16 91.3 134 44.0
Zm00001eb120700 Zea mays HOM05D003750 ORTHO05D004337 1.6e-15 87.8 125 42.4
SEGI_25228 Sequoiadendron giganteum HOM05D003750 ORTHO05D004337 1.1e-14 85.1 110 40.0
Zm00001eb277660 Zea mays HOM05D003750 ORTHO05D004337 5.2e-14 82.8 112 41.1
Zm00001eb384740 Zea mays HOM05D003750 ORTHO05D004337 5.8e-13 79.3 107 43.0
Os06g0553200 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 1.1e-11 75.1 113 40.7
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 1.0e-09 68.6 121 38.8
AagrBONN_evm.TU.Sc2ySwM_228.4867 Anthoceros agrestis HOM05D003750 ORTHO05D004337 3.9e-09 66.6 109 38.5
Os02g0230300 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 5.1e-09 66.2 68 51.5
TPR.G40574 Trifolium pratense HOM05D003750 ORTHO05D004337 5.1e-09 66.2 41 58.5
SEGI_24140 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 1.5e-08 64.7 117 33.3
Hma1.2p1_0073F.1_g038610 Hydrangea macrophylla HOM05D003750 ORTHO05D004337 3.3e-08 63.5 29 72.4
Pp3c11_23110 Physcomitrium patens HOM05D003750 ORTHO05D004337 4.7e-07 59.7 115 33.0
Sed0008485 Sechium edule HOM05D007363 ORTHO05D009018 3.1e-06 57.0 74 43.2
MELO3C015729.2 Cucumis melo HOM05D007363 ORTHO05D009018 8.9e-06 55.5 119 31.1
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 8.9e-06 55.5 89 41.6


User provided reference genes

Program Settings