Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00422 Erythranthe guttata HOM05D003996 ORTHO05D004665 0.0e+00 1229.9 621 100.0
MSTRG.14132 Avicennia marina HOM05D003996 ORTHO05D004665 5.8e-219 764.6 681 60.5
SalBow7G2067 Salvia bowleyana HOM05D003996 ORTHO05D004665 1.9e-217 759.6 653 62.8
Migut.H01245 Erythranthe guttata HOM05D003996 ORTHO05D004665 4.0e-212 741.9 684 58.9
SGA_v2.0_scaffold70G23382 Striga asiatica HOM05D003996 ORTHO05D004665 5.8e-211 738.0 609 63.1
SGA_v2.0_scaffold159G37554 Striga asiatica HOM05D003996 ORTHO05D004665 5.8e-203 711.4 655 58.8
Dinv39747 Davidia involucrata HOM05D003996 ORTHO05D004665 7.2e-193 677.9 679 55.5
Ciclev10014490m.g Citrus clementina HOM05D003996 ORTHO05D004665 7.4e-190 667.9 677 54.1
Potri.014G158200 Populus trichocarpa HOM05D003996 ORTHO05D004665 3.7e-189 665.6 650 55.4
Hma1.2p1_0177F.1_g078040 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 5.3e-188 661.8 642 55.6
Sabra14G0120200 Salix brachista HOM05D003996 ORTHO05D004665 9.1e-188 661.0 650 55.1
Thecc.01G181600 Theobroma cacao HOM05D003996 ORTHO05D004665 1.5e-187 660.2 679 52.9
Gorai.001G095400 Gossypium raimondii HOM05D003996 ORTHO05D004665 5.9e-187 658.3 662 54.8
Gohir.D07G089000 Gossypium hirsutum HOM05D003996 ORTHO05D004665 1.0e-186 657.5 662 54.8
Potri.002G224900 Populus trichocarpa HOM05D003996 ORTHO05D004665 1.0e-186 657.5 647 55.6
Duzib211G0403 Durio zibethinus HOM05D003996 ORTHO05D004665 1.3e-186 657.1 675 54.8
Oeu046908.1 Olea europaea HOM05D003996 ORTHO05D004665 1.1e-185 654.1 635 55.3
Duzib138G0037 Durio zibethinus HOM05D003996 ORTHO05D004665 4.2e-185 652.1 636 55.2
Gorai.001G196200 Gossypium raimondii HOM05D003996 ORTHO05D004665 7.2e-185 651.4 674 52.8
Rhsim04G0050600 Rhododendron simsii HOM05D003996 ORTHO05D004665 7.2e-185 651.4 659 54.2
Dinv08722 Davidia involucrata HOM05D003996 ORTHO05D004665 3.0e-183 646.0 616 56.0
vmacro09358 Vaccinium macrocarpon HOM05D003996 ORTHO05D004665 3.0e-183 646.0 672 53.3
Atru.chr6.3252 Acer truncatum HOM05D003996 ORTHO05D004665 3.9e-183 645.6 664 52.1
TWI36G0149 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 2.6e-182 642.9 674 54.0
CANSAT64G2545 Cannabis sativa HOM05D003996 ORTHO05D004665 2.8e-181 639.4 673 53.0
QL08p030755 Quercus lobata HOM05D003996 ORTHO05D004665 3.7e-181 639.0 648 54.2
Lj6g0017826 Lotus japonicus HOM05D003996 ORTHO05D004665 1.8e-180 636.7 675 52.0
TWI75G1163 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 2.4e-180 636.3 666 53.8
Lsat_1_v5_gn_7_95060 Lactuca sativa HOM05D003996 ORTHO05D004665 1.5e-179 633.6 628 53.3
HanXRQChr16g0506421 Helianthus annuus HOM05D003996 ORTHO05D004665 4.5e-179 632.1 672 50.6
ClCG02G018060 Citrullus lanatus HOM05D003996 ORTHO05D004665 3.8e-178 629.0 657 52.5
GSVIVG01030501001 Vitis vinifera HOM05D003996 ORTHO05D004665 2.5e-177 626.3 655 52.7
Gohir.A07G082500 Gossypium hirsutum HOM05D003996 ORTHO05D004665 5.5e-177 625.2 662 53.5
Hma1.2p1_2319F.1_g319820 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 5.5e-177 625.2 654 53.4
Cc05_g02970 Coffea canephora HOM05D003996 ORTHO05D004665 9.4e-177 624.4 694 52.3
Eucgr.K00757 Eucalyptus grandis HOM05D003996 ORTHO05D004665 2.7e-176 622.9 645 51.5
Solyc07g049350.3 Solanum lycopersicum HOM05D003996 ORTHO05D004665 2.7e-176 622.9 657 50.7
PGSC0003DMG400000690 Solanum tuberosum HOM05D003996 ORTHO05D004665 2.7e-176 622.9 657 50.8
Sopen07g024690 Solanum pennellii HOM05D003996 ORTHO05D004665 4.7e-176 622.1 657 50.5
Gohir.A07G168800 Gossypium hirsutum HOM05D003996 ORTHO05D004665 6.1e-176 621.7 676 51.5
Sed0004670 Sechium edule HOM05D003996 ORTHO05D004665 1.1e-174 617.5 662 51.7
Gohir.D07G175200 Gossypium hirsutum HOM05D003996 ORTHO05D004665 2.0e-174 616.7 674 51.5
DCAR_012922 Daucus carota HOM05D003996 ORTHO05D004665 3.3e-174 615.9 649 51.9
ECA234G3864 Erigeron canadensis HOM05D003996 ORTHO05D004665 3.3e-174 615.9 627 52.2
Nn1g07292 Nelumbo nucifera HOM05D003996 ORTHO05D004665 9.7e-174 614.4 635 51.8
arahy.Tifrunner.gnm1.ann1.LM4IV6 Arachis hypogaea HOM05D003996 ORTHO05D004665 2.8e-173 612.8 619 53.5
Phvul.006G012800 Phaseolus vulgaris HOM05D003996 ORTHO05D004665 2.8e-173 612.8 684 51.3
Lsat_1_v5_gn_5_124380 Lactuca sativa HOM05D003996 ORTHO05D004665 4.8e-173 612.1 622 53.7
Hund15359 Selenicereus undatus HOM05D003996 ORTHO05D004665 6.3e-173 611.7 636 52.4
Nitab4.5_0008863g0010 Nicotiana tabacum HOM05D003996 ORTHO05D004665 3.1e-172 609.4 649 52.5
Thhalv10016338m.g Eutrema salsugineum HOM05D003996 ORTHO05D004665 5.3e-172 608.6 658 49.7
HanXRQChr10g0310161 Helianthus annuus HOM05D003996 ORTHO05D004665 9.1e-172 607.8 631 52.3
MBI16_g26185_MAGBIO Magnolia biondii HOM05D003996 ORTHO05D004665 9.1e-172 607.8 691 50.9
CsaV3_6G015350 Cucumis sativus L. HOM05D003996 ORTHO05D004665 3.5e-171 605.9 658 50.5
Lalb_Chr18g0049761 Lupinus albus HOM05D003996 ORTHO05D004665 3.5e-171 605.9 648 52.0
Medtr3g080400 Medicago truncatula HOM05D003996 ORTHO05D004665 5.9e-171 605.1 646 50.5
THA.LOC104801005 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 5.9e-171 605.1 657 50.4
MD09G1113700 Malus domestica HOM05D003996 ORTHO05D004665 3.8e-170 602.4 754 47.2
TPR.G29036 Trifolium pratense HOM05D003996 ORTHO05D004665 5.0e-170 602.1 647 51.9
DCAR_021140 Daucus carota HOM05D003996 ORTHO05D004665 6.5e-170 601.7 685 49.9
THA.LOC104826134 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 5.5e-169 598.6 655 49.8
Manes.12G069800 Manihot esculenta HOM05D003996 ORTHO05D004665 1.2e-168 597.4 652 51.5
Peaxi162Scf00921g00252 Petunia axillaris HOM05D003996 ORTHO05D004665 1.2e-168 597.4 651 51.0
A03p18420 Brassica napus HOM05D003996 ORTHO05D004665 1.6e-168 597.0 679 49.2
PSO541G1393 Papaver somniferum HOM05D003996 ORTHO05D004665 3.6e-168 595.9 700 47.7
Actinidia10801 Actinidia chinensis HOM05D003996 ORTHO05D004665 6.1e-168 595.1 617 52.7
PGR142G3363 Punica granatum HOM05D003996 ORTHO05D004665 6.1e-168 595.1 651 49.3
BcaC01g05877 Brassica carinata HOM05D003996 ORTHO05D004665 8.0e-168 594.7 647 49.9
HanXRQChr10g0306531 Helianthus annuus HOM05D003996 ORTHO05D004665 8.0e-168 594.7 595 52.3
Lalb_Chr15g0080851 Lupinus albus HOM05D003996 ORTHO05D004665 8.0e-168 594.7 648 50.9
RcHm_v2.0_Chr2g0158131 Rosa chinensis HOM05D003996 ORTHO05D004665 8.0e-168 594.7 722 47.9
BolC3t14538H Brassica oleracea HOM05D003996 ORTHO05D004665 1.8e-167 593.6 678 48.5
C03p21510 Brassica napus HOM05D003996 ORTHO05D004665 2.3e-167 593.2 679 48.5
Ca_16283_v3 Cicer arietinum L. HOM05D003996 ORTHO05D004665 4.0e-167 592.4 616 52.8
Aqoxy1G02929 Aquilegia oxysepala HOM05D003996 ORTHO05D004665 5.2e-167 592.0 654 49.4
Sp4g15330 Schrenkiella parvula HOM05D003996 ORTHO05D004665 5.2e-167 592.0 650 49.2
Prupe.3G210900 Prunus persica HOM05D003996 ORTHO05D004665 8.8e-167 591.3 779 45.4
FAN09G4790 Fragaria x ananassa HOM05D003996 ORTHO05D004665 1.5e-166 590.5 714 49.3
MELO3C019738.2 Cucumis melo HOM05D003996 ORTHO05D004665 2.0e-166 590.1 646 50.3
Oeu010926.4 Olea europaea HOM05D003996 ORTHO05D004665 2.0e-166 590.1 606 53.8
Lj1C780G17 Lonicera japonica HOM05D003996 ORTHO05D004665 3.3e-166 589.3 566 56.4
ECA236G3366 Erigeron canadensis HOM05D003996 ORTHO05D004665 4.4e-166 589.0 643 51.2
FAN02G1294 Fragaria x ananassa HOM05D003996 ORTHO05D004665 5.7e-166 588.6 715 48.8
PSO675G0796 Papaver somniferum HOM05D003996 ORTHO05D004665 7.5e-166 588.2 700 47.4
PSO210G1396 Papaver somniferum HOM05D003996 ORTHO05D004665 1.3e-165 587.4 672 48.8
CAN.G1493.1 Capsicum annuum HOM05D003996 ORTHO05D004665 3.7e-165 585.9 668 48.7
FAN05G2256 Fragaria x ananassa HOM05D003996 ORTHO05D004665 3.7e-165 585.9 722 49.0
FAN14G1081 Fragaria x ananassa HOM05D003996 ORTHO05D004665 6.3e-165 585.1 707 49.1
ECA240G4712 Erigeron canadensis HOM05D003996 ORTHO05D004665 8.3e-165 584.7 691 48.9
FvH4_6g42290 Fragaria vesca HOM05D003996 ORTHO05D004665 1.1e-164 584.3 707 48.9
CARHR126920 Cardamine hirsuta HOM05D003996 ORTHO05D004665 1.4e-164 583.9 659 48.4
PSO832G2142 Papaver somniferum HOM05D003996 ORTHO05D004665 5.3e-164 582.0 658 48.5
AL4G28490 Arabidopsis lyrata HOM05D003996 ORTHO05D004665 1.2e-163 580.9 661 48.1
Nn1g03381 Nelumbo nucifera HOM05D003996 ORTHO05D004665 1.0e-162 577.8 653 49.9
Nitab4.5_0000482g0250 Nicotiana tabacum HOM05D003996 ORTHO05D004665 2.2e-162 576.6 683 48.2
AT2G32970 Arabidopsis thaliana HOM05D003996 ORTHO05D004665 2.9e-162 576.2 655 47.9
AUR62032475 Chenopodium quinoa HOM05D003996 ORTHO05D004665 2.9e-162 576.2 635 49.6
Psat5g111680 Pisum sativum HOM05D003996 ORTHO05D004665 4.7e-160 568.9 664 49.1
VMungo0540G1114 Vigna mungo HOM05D003996 ORTHO05D004665 6.8e-159 565.1 638 50.8
EL10Ac6g13970 Beta vulgaris HOM05D003996 ORTHO05D004665 5.7e-158 562.0 611 50.6
BcaB01g03955 Brassica carinata HOM05D003996 ORTHO05D004665 2.2e-157 560.1 685 46.7
Glyma.20G056800 Glycine max HOM05D003996 ORTHO05D004665 4.8e-157 558.9 697 47.9
Aa31LG5G4630 Aethionema arabicum HOM05D003996 ORTHO05D004665 1.8e-156 557.0 650 46.5
TAR626G1560 Trochodendron aralioides HOM05D003996 ORTHO05D004665 3.1e-156 556.2 641 50.7
Sabra02G0172000 Salix brachista HOM05D003996 ORTHO05D004665 5.4e-156 555.4 688 46.9
Ah.03g136730 Amaranthus hybridus HOM05D003996 ORTHO05D004665 1.5e-153 547.4 630 47.8
Carub.0004s1441 Capsella rubella HOM05D003996 ORTHO05D004665 1.2e-152 544.3 662 45.8
Lsat_1_v5_gn_9_105800 Lactuca sativa HOM05D003996 ORTHO05D004665 1.6e-152 543.9 655 48.2
Manes.13G066300 Manihot esculenta HOM05D003996 ORTHO05D004665 2.3e-151 540.0 596 49.8
MD17G1103800 Malus domestica HOM05D003996 ORTHO05D004665 5.2e-151 538.9 731 45.0
CDE07G0144 Ceratophyllum demersum HOM05D003996 ORTHO05D004665 2.0e-150 537.0 629 49.4
AUR62040130 Chenopodium quinoa HOM05D003996 ORTHO05D004665 3.7e-149 532.7 630 47.6
BraA05t20204Z Brassica rapa HOM05D003996 ORTHO05D004665 4.1e-148 529.3 663 45.4
A05p12660 Brassica napus HOM05D003996 ORTHO05D004665 7.0e-148 528.5 662 45.6
arahy.Tifrunner.gnm1.ann1.ZWYX82 Arachis hypogaea HOM05D003996 ORTHO05D004665 1.2e-147 527.7 613 49.4
C04p16550 Brassica napus HOM05D003996 ORTHO05D004665 1.6e-147 527.3 672 45.4
BcaC02g11363 Brassica carinata HOM05D003996 ORTHO05D004665 3.5e-147 526.2 672 45.2
SHI10040 Sapria himalayana HOM05D003996 ORTHO05D000023 1.1e-145 521.2 650 45.2
Haze_12770 Corylus avellana HOM05D003996 ORTHO05D004665 1.2e-144 517.7 562 50.7
BolC4t23207H Brassica oleracea HOM05D003996 ORTHO05D004665 6.1e-144 515.4 679 44.9
Os02g0771800 Oryza sativa ssp. japonica HOM05D003996 ORTHO05D004665 6.1e-144 515.4 654 45.7
Zm00001eb256350 Zea mays HOM05D003996 ORTHO05D004665 5.2e-143 512.3 654 45.1
HPP92_010852 Vanilla planifolia HOM05D003996 ORTHO05D004665 9.8e-142 508.1 618 47.2
Lj8A129T88 Lonicera japonica HOM05D003996 ORTHO05D004665 6.4e-141 505.4 699 44.2
CSS0033567 Camellia sinensis var. sinensis HOM05D003996 ORTHO05D004665 7.0e-140 501.9 587 49.4
Sed0016081 Sechium edule HOM05D003996 ORTHO05D004665 6.0e-139 498.8 595 48.6
BraA03t11105Z Brassica rapa HOM05D003996 ORTHO05D004665 3.9e-138 496.1 664 43.5
unitig_26.g9924 Utricularia gibba HOM05D003996 ORTHO05D004665 8.6e-130 468.4 511 51.3
Glyma.13G026700 Glycine max HOM05D003996 ORTHO05D004665 4.0e-127 459.5 453 55.0
DCAR_023146 Daucus carota HOM05D003996 ORTHO05D004665 6.4e-125 452.2 675 41.9
BcaNung06410 Brassica carinata HOM05D003996 ORTHO05D004665 6.8e-119 432.2 628 42.7
CiPaw.04G110600 Carya illinoinensis HOM05D003996 ORTHO05D004665 2.0e-118 430.6 514 46.9
Sc06g0009640 Simmondsia chinensis HOM05D003996 ORTHO05D004665 1.6e-115 421.0 458 49.1
SEGI_14118 Sequoiadendron giganteum HOM05D003996 ORTHO05D004665 1.3e-109 401.4 736 37.2
Sc05g0002040 Simmondsia chinensis HOM05D003996 ORTHO05D004665 1.4e-108 397.9 589 41.1
CANSAT01G0074 Cannabis sativa HOM05D003996 ORTHO05D004665 2.1e-104 384.0 599 41.1
Duzib133G0500 Durio zibethinus HOM05D003996 ORTHO05D004665 4.8e-104 382.9 626 38.7
AUR62001107 Chenopodium quinoa HOM05D003996 ORTHO05D004665 2.4e-103 380.6 628 38.5
EL10Ac7g17863 Beta vulgaris HOM05D003996 ORTHO05D004665 2.0e-102 377.5 611 38.6
BcaB02g10511 Brassica carinata HOM05D003996 ORTHO05D004665 6.4e-101 372.5 454 45.4
AUR62008931 Chenopodium quinoa HOM05D003996 ORTHO05D004665 1.1e-100 371.7 647 37.9
COL.COLO4_21871 Corchorus olitorius HOM05D003996 ORTHO05D004665 5.1e-98 362.8 378 51.6
GSVIVG01003286001 Vitis vinifera HOM05D003996 ORTHO05D004665 3.1e-95 353.6 564 40.8
Hund18404 Selenicereus undatus HOM05D003996 ORTHO05D004665 6.9e-95 352.4 603 39.1
CiPaw.03G155400 Carya illinoinensis HOM05D003996 ORTHO05D004665 4.2e-92 343.2 350 52.9
Pp3c17_9940 Physcomitrium patens HOM05D003996 ORTHO05D004665 1.6e-91 341.3 730 33.6
SMO361G0133 Selaginella moellendorffii HOM05D003996 ORTHO05D004665 6.7e-90 335.9 641 35.7
Pp3c9_1750 Physcomitrium patens HOM05D003996 ORTHO05D004665 2.6e-86 323.9 752 32.8
Manes.13G046600 Manihot esculenta HOM05D003996 ORTHO05D004665 4.2e-84 316.6 480 41.5
CANSAT01G3237 Cannabis sativa HOM05D003996 ORTHO05D004665 2.7e-83 313.9 441 42.9
Zm00001eb297890 Zea mays HOM05D003996 ORTHO05D004665 8.2e-80 302.4 503 38.2
Mapoly0071s0059 Marchantia polymorpha HOM05D003996 ORTHO05D004665 2.4e-79 300.8 793 30.5
Ah.08g214450 Amaranthus hybridus HOM05D003996 ORTHO05D004665 4.8e-72 276.6 484 38.0
CiPaw.03G155500 Carya illinoinensis HOM05D003996 ORTHO05D004665 4.8e-72 276.6 210 66.7
HPP92_011782 Vanilla planifolia HOM05D003996 ORTHO05D004665 6.9e-71 272.7 431 39.7
COL.COLO4_21870 Corchorus olitorius HOM05D003996 ORTHO05D004665 4.5e-70 270.0 208 65.9
AagrBONN_evm.TU.Sc2ySwM_368.1061 Anthoceros agrestis HOM05D003996 ORTHO05D004665 1.4e-66 258.5 744 28.4
Cpa.g.sc132.19 Carica papaya HOM05D003996 ORTHO05D004665 8.2e-64 249.2 208 61.5
Hund05567 Selenicereus undatus HOM05D003996 ORTHO05D004665 2.0e-62 244.6 466 34.3
CBR_g29855 Chara braunii HOM05D003996 ORTHO05D004665 2.5e-60 237.7 334 41.0
Actinidia03596 Actinidia chinensis HOM05D003996 ORTHO05D004665 7.5e-33 146.4 239 38.1
Thecc.01G223400 Theobroma cacao HOM05D003996 ORTHO05D004665 4.0e-26 124.0 191 39.8
Actinidia03595 Actinidia chinensis HOM05D003996 ORTHO05D004665 2.6e-25 121.3 99 65.7
Actinidia03594 Actinidia chinensis HOM05D003996 ORTHO05D004665 6.4e-24 116.7 115 53.0
C09p40870 Brassica napus HOM05D003996 ORTHO05D004665 2.3e-18 98.2 87 59.8
CiPaw.04G110700 Carya illinoinensis HOM05D003996 ORTHO05D004665 2.3e-18 98.2 60 80.0
Hund15378 Selenicereus undatus HOM05D003996 ORTHO05D004665 5.2e-18 97.1 110 50.0
unitig_26.g9925 Utricularia gibba HOM05D003996 ORTHO05D004665 6.0e-14 83.6 52 76.9
MCO15G069 Micromonas commoda HOM05D003996 ORTHO05D004665 2.8e-11 74.7 159 32.1
Cre12.g513852 Chlamydomonas reinhardtii HOM05D003996 ORTHO05D004665 2.3e-10 71.6 170 30.6
Ah.08g214440 Amaranthus hybridus HOM05D003996 ORTHO05D004665 2.9e-08 64.7 54 61.1
Os05g0597400 Oryza sativa ssp. japonica HOM05D003996 ORTHO05D004665 4.9e-08 63.9 54 53.7
DCAR_019433 Daucus carota HOM05D003996 ORTHO05D004665 1.4e-07 62.4 53 60.4
BcaC09g50171 Brassica carinata HOM05D003996 ORTHO05D092235 2.7e-06 58.2 49 55.1


User provided reference genes

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