Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00413 Erythranthe guttata HOM05D006996 ORTHO05D008961 2.2e-47 191.8 88 100.0
MSTRG.6557 Avicennia marina HOM05D006996 ORTHO05D008961 2.9e-39 164.9 86 87.2
unitig_21.g20728 Utricularia gibba HOM05D006996 ORTHO05D008961 6.4e-39 163.7 83 84.3
C08p51920 Brassica napus HOM05D006996 ORTHO05D008961 3.2e-38 161.4 88 87.5
BolC8t52723H Brassica oleracea HOM05D006996 ORTHO05D008961 3.2e-38 161.4 88 87.5
BraA09t42088Z Brassica rapa HOM05D006996 ORTHO05D008961 3.2e-38 161.4 88 87.5
AL1G14970 Arabidopsis lyrata HOM05D006996 ORTHO05D008961 7.1e-38 160.2 88 86.4
BcaC07g42146 Brassica carinata HOM05D006996 ORTHO05D008961 7.1e-38 160.2 88 86.4
Eucgr.A01713 Eucalyptus grandis HOM05D006996 ORTHO05D008961 1.2e-37 159.5 87 83.9
A10p03740 Brassica napus HOM05D006996 ORTHO05D008961 1.6e-37 159.1 87 86.2
C05p03440 Brassica napus HOM05D006996 ORTHO05D008961 1.6e-37 159.1 87 86.2
BolC5t29123H Brassica oleracea HOM05D006996 ORTHO05D008961 1.6e-37 159.1 87 86.2
BraA10t42647Z Brassica rapa HOM05D006996 ORTHO05D008961 1.6e-37 159.1 87 86.2
Thhalv10009219m.g Eutrema salsugineum HOM05D006996 ORTHO05D008961 2.1e-37 158.7 87 86.2
Sp1g04060 Schrenkiella parvula HOM05D006996 ORTHO05D008961 2.1e-37 158.7 87 86.2
SpUn0024_0080 Schrenkiella parvula HOM05D006996 ORTHO05D008961 2.1e-37 158.7 87 86.2
AT1G05205 Arabidopsis thaliana HOM05D006996 ORTHO05D008961 2.7e-37 158.3 88 86.4
THA.LOC104800987 Tarenaya hassleriana HOM05D006996 ORTHO05D008961 2.7e-37 158.3 86 82.6
Cc05_g04850 Coffea canephora HOM05D006996 ORTHO05D008961 3.5e-37 157.9 86 80.2
Dinv39702 Davidia involucrata HOM05D006996 ORTHO05D008961 4.6e-37 157.5 86 80.2
Carub.0001s0448 Capsella rubella HOM05D006996 ORTHO05D008961 1.0e-36 156.4 87 85.1
Aa31LG1G19540 Aethionema arabicum HOM05D006996 ORTHO05D008961 1.8e-36 155.6 87 83.9
Peaxi162Scf00007g00930 Petunia axillaris HOM05D006996 ORTHO05D008961 1.8e-36 155.6 86 80.2
CARHR004680 Cardamine hirsuta HOM05D006996 ORTHO05D008961 2.3e-36 155.2 84 84.5
Oeu027249.1 Olea europaea HOM05D006996 ORTHO05D008961 5.1e-36 154.1 86 79.1
Dinv05447 Davidia involucrata HOM05D006996 ORTHO05D008961 8.7e-36 153.3 86 79.1
GSVIVG01012649001 Vitis vinifera HOM05D006996 ORTHO05D008961 8.7e-36 153.3 86 77.9
Nitab4.5_0002137g0190 Nicotiana tabacum HOM05D006996 ORTHO05D008961 1.1e-35 152.9 86 79.1
CiPaw.03G161100 Carya illinoinensis HOM05D006996 ORTHO05D008961 2.5e-35 151.8 87 78.2
arahy.Tifrunner.gnm1.ann1.7T5QAW Arachis hypogaea HOM05D006996 ORTHO05D008961 3.3e-35 151.4 85 81.2
arahy.Tifrunner.gnm1.ann1.BHY6M8 Arachis hypogaea HOM05D006996 ORTHO05D008961 3.3e-35 151.4 85 81.2
arahy.Tifrunner.gnm1.ann1.MSE8LU Arachis hypogaea HOM05D006996 ORTHO05D008961 3.3e-35 151.4 85 81.2
arahy.Tifrunner.gnm1.ann1.QWF8TS Arachis hypogaea HOM05D006996 ORTHO05D008961 3.3e-35 151.4 85 81.2
Sopen07g026050 Solanum pennellii HOM05D006996 ORTHO05D008961 4.3e-35 151.0 82 80.5
PGR042G2836 Punica granatum HOM05D006996 ORTHO05D008961 5.6e-35 150.6 87 79.3
Solyc07g052420.3 Solanum lycopersicum HOM05D006996 ORTHO05D008961 5.6e-35 150.6 82 80.5
CANSAT64G1676 Cannabis sativa HOM05D006996 ORTHO05D008961 7.4e-35 150.2 87 78.2
MD09G1069700 Malus domestica HOM05D006996 ORTHO05D008961 7.4e-35 150.2 87 80.5
MD17G1095900 Malus domestica HOM05D006996 ORTHO05D008961 7.4e-35 150.2 87 80.5
RcHm_v2.0_Chr2g0159651 Rosa chinensis HOM05D006996 ORTHO05D008961 7.4e-35 150.2 87 79.3
Ciclev10017328m.g Citrus clementina HOM05D006996 ORTHO05D008961 9.6e-35 149.8 87 79.3
Hma1.2p1_0957F.1_g241430 Hydrangea macrophylla HOM05D006996 ORTHO05D008961 9.6e-35 149.8 86 76.7
PGSC0003DMG400025488 Solanum tuberosum HOM05D006996 ORTHO05D008961 9.6e-35 149.8 82 79.3
QL08p033312 Quercus lobata HOM05D006996 ORTHO05D008961 1.3e-34 149.4 87 79.3
CSS0007447 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.6e-34 149.1 85 76.5
FvH4_6g43320 Fragaria vesca HOM05D006996 ORTHO05D008961 1.6e-34 149.1 87 78.2
FAN14G3455 Fragaria x ananassa HOM05D006996 ORTHO05D008961 1.6e-34 149.1 87 78.2
Gohir.A02G139400 Gossypium hirsutum HOM05D006996 ORTHO05D008961 1.6e-34 149.1 83 78.3
Gohir.D03G050100 Gossypium hirsutum HOM05D006996 ORTHO05D008961 1.6e-34 149.1 83 78.3
Gorai.003G051600 Gossypium raimondii HOM05D006996 ORTHO05D008961 1.6e-34 149.1 83 78.3
Nitab4.5_0007092g0010 Nicotiana tabacum HOM05D006996 ORTHO05D008961 1.6e-34 149.1 86 79.1
Prupe.3G218000 Prunus persica HOM05D006996 ORTHO05D008961 1.6e-34 149.1 87 79.3
PSO541G2316 Papaver somniferum HOM05D006996 ORTHO05D008961 2.8e-34 148.3 85 80.0
PSO675G8615 Papaver somniferum HOM05D006996 ORTHO05D008961 2.8e-34 148.3 85 80.0
Duzib128G0982 Durio zibethinus HOM05D006996 ORTHO05D008961 3.7e-34 147.9 87 75.9
Lsat_1_v5_gn_5_163860 Lactuca sativa HOM05D006996 ORTHO05D008961 3.7e-34 147.9 86 77.9
Manes.13G070800 Manihot esculenta HOM05D006996 ORTHO05D008961 3.7e-34 147.9 87 75.9
HPP92_011134 Vanilla planifolia HOM05D006996 ORTHO05D008961 3.7e-34 147.9 87 78.2
FAN05G4357 Fragaria x ananassa HOM05D006996 ORTHO05D008961 4.8e-34 147.5 87 77.0
Thecc.05G208500 Theobroma cacao HOM05D006996 ORTHO05D008961 6.2e-34 147.1 82 81.7
Sed0014620 Sechium edule HOM05D006996 ORTHO05D008961 8.1e-34 146.7 87 78.2
CSS0016840 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.1e-33 146.4 85 75.3
Glyma.12G194300 Glycine max HOM05D006996 ORTHO05D008961 1.1e-33 146.4 83 79.5
Ah.11g047700 Amaranthus hybridus HOM05D006996 ORTHO05D008961 1.4e-33 146.0 82 78.0
CAN.G846.6 Capsicum annuum HOM05D006996 ORTHO05D008961 1.4e-33 146.0 82 75.6
CsaV3_7G003680 Cucumis sativus L. HOM05D006996 ORTHO05D008961 1.4e-33 146.0 87 77.0
Lj1A759T40 Lonicera japonica HOM05D006996 ORTHO05D008961 1.4e-33 146.0 84 77.4
Lj1A760T24 Lonicera japonica HOM05D006996 ORTHO05D008961 1.4e-33 146.0 84 77.4
TWI18G0629 Tripterygium wilfordii HOM05D006996 ORTHO05D008961 1.8e-33 145.6 87 74.7
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 2.4e-33 145.2 86 77.9
FAN02G2509 Fragaria x ananassa HOM05D006996 ORTHO05D008961 2.4e-33 145.2 87 77.0
AUR62021549 Chenopodium quinoa HOM05D006996 ORTHO05D008961 4.0e-33 144.4 85 77.6
ClCG02G001860 Citrullus lanatus HOM05D006996 ORTHO05D008961 5.3e-33 144.1 87 77.0
EL10Ac5g11141 Beta vulgaris HOM05D006996 ORTHO05D008961 6.9e-33 143.7 82 76.8
Cfa014416 Carpinus fangiana HOM05D006996 ORTHO05D008961 6.9e-33 143.7 87 75.9
MELO3C018811.2 Cucumis melo HOM05D006996 ORTHO05D008961 6.9e-33 143.7 85 77.6
HanXRQChr11g0350381 Helianthus annuus HOM05D006996 ORTHO05D008961 6.9e-33 143.7 86 74.4
TPR.G4182 Trifolium pratense HOM05D006996 ORTHO05D008961 6.9e-33 143.7 87 75.9
Zm00001eb100890 Zea mays HOM05D006996 ORTHO05D008961 6.9e-33 143.7 81 77.8
Zm00001eb209620 Zea mays HOM05D006996 ORTHO05D008961 6.9e-33 143.7 81 77.8
CDE05G0144 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 9.0e-33 143.3 82 76.8
CDE11G0800 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 9.0e-33 143.3 82 76.8
AUR62000730 Chenopodium quinoa HOM05D006996 ORTHO05D008961 9.0e-33 143.3 85 76.5
Hund01114 Selenicereus undatus HOM05D006996 ORTHO05D008961 9.0e-33 143.3 86 75.6
vmacro09127 Vaccinium macrocarpon HOM05D006996 ORTHO05D008961 9.0e-33 143.3 85 72.9
Medtr2g088460 Medicago truncatula HOM05D006996 ORTHO05D008961 1.2e-32 142.9 81 77.8
Potri.018G093501 Populus trichocarpa HOM05D006996 ORTHO05D008961 3.4e-32 141.4 81 75.3
SalBow7G3715 Salvia bowleyana HOM05D006996 ORTHO05D008961 4.5e-32 141.0 86 74.4
Sabra18G0080400 Salix brachista HOM05D006996 ORTHO05D008961 9.9e-32 139.8 81 74.1
Glyma.13G308300 Glycine max HOM05D006996 ORTHO05D008961 1.7e-31 139.0 81 77.8
Lj3g0015321 Lotus japonicus HOM05D006996 ORTHO05D008961 1.7e-31 139.0 85 77.6
Nn2g12174 Nelumbo nucifera HOM05D006996 ORTHO05D008961 3.8e-31 137.9 110 61.8
Actinidia30517 Actinidia chinensis HOM05D006996 ORTHO05D008961 4.9e-31 137.5 84 73.8
AUR62008544 Chenopodium quinoa HOM05D006996 ORTHO05D008961 1.1e-30 136.3 85 74.1
ECA248G0348 Erigeron canadensis HOM05D006996 ORTHO05D008961 2.5e-30 135.2 87 70.1
Phvul.005G114700 Phaseolus vulgaris HOM05D006996 ORTHO05D008961 4.2e-30 134.4 79 73.4
Lalb_Chr14g0375741 Lupinus albus HOM05D006996 ORTHO05D008961 6.0e-29 130.6 75 74.7
DCAR_014473 Daucus carota HOM05D006996 ORTHO05D008961 1.1e-27 126.3 64 87.5
TAR627G0363 Trochodendron aralioides HOM05D006996 ORTHO05D008961 3.1e-25 118.2 64 79.7
CSS0029979 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 5.3e-25 117.5 67 76.1
Sc12g0002320 Simmondsia chinensis HOM05D006996 ORTHO05D008961 5.3e-25 117.5 63 82.5
Lsat_1_v5_gn_4_184120 Lactuca sativa HOM05D006996 ORTHO05D008961 4.9e-23 110.9 64 75.0
Psat5g264240 Pisum sativum HOM05D006996 ORTHO05D008961 6.5e-23 110.5 63 81.0
TAR676G0001 Trochodendron aralioides HOM05D006996 ORTHO05D008961 3.4e-16 88.2 49 75.5
COL.COLO4_06384 Corchorus olitorius HOM05D006996 ORTHO05D008961 5.9e-16 87.4 49 77.6
Mapoly0024s0016 Marchantia polymorpha HOM05D006996 ORTHO05D008961 1.7e-15 85.9 89 49.4
MCO13G082 Micromonas commoda HOM05D006996 ORTHO05D008961 3.8e-15 84.7 58 63.8
SEGI_13346 Sequoiadendron giganteum HOM05D006996 ORTHO05D008961 1.1e-11 73.2 61 55.7
CSS0002917 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.7e-10 69.3 39 76.9
BcaB01g06120 Brassica carinata HOM05D006996 ORTHO05D008961 3.7e-10 68.2 42 78.6
FAN09G4817 Fragaria x ananassa HOM05D006996 ORTHO05D008961 3.7e-10 68.2 37 83.8
CSS0018135 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 3.1e-09 65.1 39 71.8
TPR.G35081 Trifolium pratense HOM05D006996 ORTHO05D048925 1.2e-08 63.2 41 73.2


User provided reference genes

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