Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00334 Erythranthe guttata HOM05D007281 ORTHO05D009241 6.0e-101 371.7 189 100.0
MSTRG.13304 Avicennia marina HOM05D007281 ORTHO05D009241 2.6e-48 196.8 206 55.8
SGA_v2.0_scaffold70G23463 Striga asiatica HOM05D007281 ORTHO05D009241 7.9e-45 185.3 180 55.6
SalBow7G4701 Salvia bowleyana HOM05D007281 ORTHO05D009241 1.8e-44 184.1 201 50.2
Cfa014545 Carpinus fangiana HOM05D007281 ORTHO05D009241 4.5e-32 142.9 190 41.6
Haze_13088 Corylus avellana HOM05D007281 ORTHO05D009241 4.5e-32 142.9 159 47.8
Nitab4.5_0001871g0100 Nicotiana tabacum HOM05D007281 ORTHO05D009241 1.9e-30 137.5 179 43.0
Peaxi162Scf00007g02726 Petunia axillaris HOM05D007281 ORTHO05D009241 7.2e-30 135.6 179 43.0
Sabra16G0168300 Salix brachista HOM05D007281 ORTHO05D009241 9.4e-30 135.2 174 44.8
DCAR_012978 Daucus carota HOM05D007281 ORTHO05D009241 1.2e-29 134.8 164 46.3
QL03p011182 Quercus lobata HOM05D007281 ORTHO05D009241 1.2e-29 134.8 158 45.6
Lj1P735T42 Lonicera japonica HOM05D007281 ORTHO05D009241 4.7e-29 132.9 175 45.7
Dinv15494 Davidia involucrata HOM05D007281 ORTHO05D009241 6.1e-29 132.5 160 46.2
Actinidia30489 Actinidia chinensis HOM05D007281 ORTHO05D009241 7.9e-29 132.1 159 45.9
CAN.G508.23 Capsicum annuum HOM05D007281 ORTHO05D009241 7.9e-29 132.1 170 44.1
Potri.009G067400 Populus trichocarpa HOM05D007281 ORTHO05D009241 1.0e-28 131.7 148 43.9
CiPaw.03G169800 Carya illinoinensis HOM05D007281 ORTHO05D009241 1.8e-28 131.0 157 44.6
Nitab4.5_0002370g0080 Nicotiana tabacum HOM05D007281 ORTHO05D009241 2.3e-28 130.6 175 41.7
CSS0001951 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 5.1e-28 129.4 160 43.8
CSS0030135 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 5.1e-28 129.4 160 43.8
Potri.001G273100 Populus trichocarpa HOM05D007281 ORTHO05D009241 1.1e-27 128.3 171 44.4
GSVIVG01020865001 Vitis vinifera HOM05D007281 ORTHO05D009241 1.1e-27 128.3 166 46.4
Rhsim04G0063100 Rhododendron simsii HOM05D007281 ORTHO05D009241 1.5e-27 127.9 161 46.0
Sabra09G0050300 Salix brachista HOM05D007281 ORTHO05D009241 2.0e-27 127.5 190 37.9
Cc05_g06270 Coffea canephora HOM05D007281 ORTHO05D009241 2.6e-27 127.1 156 45.5
Hma1.2p1_0565F.1_g179540 Hydrangea macrophylla HOM05D007281 ORTHO05D009241 3.3e-27 126.7 161 44.7
Solyc07g054680.3 Solanum lycopersicum HOM05D007281 ORTHO05D009241 7.4e-27 125.6 197 39.1
Thecc.02G171700 Theobroma cacao HOM05D007281 ORTHO05D009241 7.4e-27 125.6 160 44.4
AUR62041771 Chenopodium quinoa HOM05D007281 ORTHO05D009241 1.1e-25 121.7 175 40.6
TAR633G2446 Trochodendron aralioides HOM05D007281 ORTHO05D009241 1.4e-25 121.3 160 40.0
Atru.chr6.3074 Acer truncatum HOM05D007281 ORTHO05D009241 4.1e-25 119.8 174 43.1
Ah.12g062420 Amaranthus hybridus HOM05D007281 ORTHO05D009241 5.3e-25 119.4 199 38.2
Sc06g0009160 Simmondsia chinensis HOM05D007281 ORTHO05D009241 7.0e-25 119.0 159 44.0
ECA234G1359 Erigeron canadensis HOM05D007281 ORTHO05D009241 1.2e-24 118.2 164 38.4
Manes.01G177300 Manihot esculenta HOM05D007281 ORTHO05D009241 2.6e-24 117.1 193 37.3
Hund01235 Selenicereus undatus HOM05D007281 ORTHO05D009241 5.9e-24 115.9 160 43.1
Hund01238 Selenicereus undatus HOM05D007281 ORTHO05D009241 5.9e-24 115.9 160 43.1
Gohir.A04G105900 Gossypium hirsutum HOM05D007281 ORTHO05D009241 1.0e-23 115.2 157 42.0
Nn8g41289 Nelumbo nucifera HOM05D007281 ORTHO05D009241 1.0e-23 115.2 168 37.5
TWI36G0005 Tripterygium wilfordii HOM05D007281 ORTHO05D009241 1.0e-23 115.2 169 41.4
TAR636G0075 Trochodendron aralioides HOM05D007281 ORTHO05D009241 1.7e-23 114.4 161 36.6
PGSC0003DMG400018370 Solanum tuberosum HOM05D007281 ORTHO05D009241 2.2e-23 114.0 166 42.2
EL10As1g23104 Beta vulgaris HOM05D007281 ORTHO05D009241 2.9e-23 113.6 140 44.3
Cpa.g.sc116.70 Carica papaya HOM05D007281 ORTHO05D009241 3.8e-23 113.2 142 44.4
Gorai.012G131800 Gossypium raimondii HOM05D007281 ORTHO05D009241 3.8e-23 113.2 155 42.6
Gohir.D04G145700 Gossypium hirsutum HOM05D007281 ORTHO05D009241 5.0e-23 112.8 155 41.9
PSO384G2432 Papaver somniferum HOM05D007281 ORTHO05D009241 1.9e-22 110.9 189 37.6
Aqoxy1G00179 Aquilegia oxysepala HOM05D007281 ORTHO05D009241 3.2e-22 110.2 160 34.4
Ciclev10016159m.g Citrus clementina HOM05D007281 ORTHO05D009241 9.4e-22 108.6 138 43.5
ClCG01G013900 Citrullus lanatus HOM05D007281 ORTHO05D009241 8.0e-21 105.5 169 37.9
HanXRQChr15g0488101 Helianthus annuus HOM05D007281 ORTHO05D009241 1.4e-20 104.8 172 34.9
MBI03_g06061_MAGBIO Magnolia biondii HOM05D007281 ORTHO05D009241 1.4e-20 104.8 160 38.1
CANSAT64G1356 Cannabis sativa HOM05D007281 ORTHO05D009241 3.3e-19 100.1 187 33.7
Ca_01535_v3 Cicer arietinum L. HOM05D007281 ORTHO05D009241 5.7e-19 99.4 164 36.0
Lsat_1_v5_gn_4_69540 Lactuca sativa HOM05D007281 ORTHO05D009241 9.7e-19 98.6 157 30.6
Sed0007470 Sechium edule HOM05D007281 ORTHO05D009241 1.1e-17 95.1 158 38.0
Glyma.13G301000 Glycine max HOM05D007281 ORTHO05D009241 1.8e-17 94.4 157 35.0
Lj3g0021775 Lotus japonicus HOM05D007281 ORTHO05D009241 1.8e-17 94.4 168 35.1
CsaV3_1G014130 Cucumis sativus L. HOM05D007281 ORTHO05D009241 1.6e-16 91.3 168 36.9
arahy.Tifrunner.gnm1.ann1.HBB9ZN Arachis hypogaea HOM05D001233 ORTHO05D009241 5.9e-16 89.4 135 37.8
PGR042G3246 Punica granatum HOM05D007281 ORTHO05D009241 1.0e-15 88.6 164 34.8
arahy.Tifrunner.gnm1.ann1.JM9TK1 Arachis hypogaea HOM05D007281 ORTHO05D009241 1.1e-14 85.1 135 38.5
PSO339G5345 Papaver somniferum HOM05D007281 ORTHO05D009241 2.5e-14 84.0 132 39.4
arahy.Tifrunner.gnm1.ann1.F4A8JX Arachis hypogaea HOM05D007281 ORTHO05D009241 3.2e-14 83.6 131 37.4
vmacro09292 Vaccinium macrocarpon HOM05D007281 ORTHO05D009241 1.6e-13 81.3 99 47.5
Psat5g268080 Pisum sativum HOM05D007281 ORTHO05D009241 2.7e-13 80.5 164 32.9
VMungo1080G1478 Vigna mungo HOM05D007281 ORTHO05D009241 2.7e-13 80.5 152 33.6
Carub.0001s1156 Capsella rubella HOM05D007281 ORTHO05D009241 3.6e-13 80.1 196 30.1
Medtr2g090030 Medicago truncatula HOM05D007281 ORTHO05D009241 1.4e-12 78.2 180 30.0
Medtr2g007050 Medicago truncatula HOM05D007281 ORTHO05D009241 2.3e-12 77.4 180 30.0
TPR.G27076 Trifolium pratense HOM05D007281 ORTHO05D009241 2.3e-12 77.4 135 34.8
MD17G1084400 Malus domestica HOM05D007281 ORTHO05D009241 3.0e-12 77.0 161 31.1
Aa31LG1G2830 Aethionema arabicum HOM05D007281 ORTHO05D009241 5.2e-12 76.3 177 30.5
Lalb_Chr14g0366621 Lupinus albus HOM05D007281 ORTHO05D009241 5.2e-12 76.3 182 30.8
Thhalv10007999m.g Eutrema salsugineum HOM05D007281 ORTHO05D009241 1.2e-11 75.1 160 32.5
HPP92_019763 Vanilla planifolia HOM05D007281 ORTHO05D009241 1.2e-11 75.1 137 32.1
Eucgr.A01777 Eucalyptus grandis HOM05D007281 ORTHO05D009241 1.5e-11 74.7 97 39.2
Prupe.3G231200 Prunus persica HOM05D007281 ORTHO05D009241 3.4e-11 73.6 149 32.9
A06p09560 Brassica napus HOM05D007281 ORTHO05D009241 5.7e-11 72.8 129 34.9
BraA06t24146Z Brassica rapa HOM05D007281 ORTHO05D009241 9.8e-11 72.0 129 34.9
Sp1g10520 Schrenkiella parvula HOM05D007281 ORTHO05D009241 2.2e-10 70.9 129 33.3
Zm00001eb290940 Zea mays HOM05D007281 ORTHO05D009241 4.8e-10 69.7 117 35.0
RcHm_v2.0_Chr1g0342741 Rosa chinensis HOM05D007281 ORTHO05D009241 1.8e-09 67.8 149 28.9
Sopen07g028580 Solanum pennellii HOM05D007281 ORTHO05D009241 3.1e-09 67.0 94 43.6
FAN02G4278 Fragaria x ananassa HOM05D007281 ORTHO05D009241 1.6e-08 64.7 123 33.3


User provided reference genes

Program Settings