Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00271 Erythranthe guttata HOM05D002063 ORTHO05D002075 3.8e-263 911.0 472 100.0
MSTRG.14309 Avicennia marina HOM05D002063 ORTHO05D002075 1.0e-42 178.7 672 30.4
Migut.H02149 Erythranthe guttata HOM05D002063 ORTHO05D002075 2.4e-39 167.5 666 28.4
Dinv07711 Davidia involucrata HOM05D002063 ORTHO05D002075 5.3e-31 139.8 690 27.1
Oeu053234.3 Olea europaea HOM05D002063 ORTHO05D002075 2.9e-29 134.0 672 28.0
SalBow7G0816 Salvia bowleyana HOM05D002063 ORTHO05D002075 3.8e-29 133.7 633 27.5
Oeu024445.3 Olea europaea HOM05D002063 ORTHO05D002075 6.5e-29 132.9 654 28.4
Dinv05584 Davidia involucrata HOM05D002063 ORTHO05D002075 2.1e-27 127.9 382 31.9
CSS0017486 Camellia sinensis var. sinensis HOM05D002063 ORTHO05D002075 6.8e-26 122.9 660 25.6
Cc05_g08420 Coffea canephora HOM05D002063 ORTHO05D002075 4.4e-25 120.2 684 26.3
Hma1.2p1_0178F.1_g078740 Hydrangea macrophylla HOM05D002063 ORTHO05D002075 4.4e-25 120.2 660 27.0
GSVIVG01020715001 Vitis vinifera HOM05D002063 ORTHO05D002075 8.3e-24 115.9 647 26.1
Nitab4.5_0006875g0040 Nicotiana tabacum HOM05D002063 ORTHO05D002075 3.1e-23 114.0 647 27.0
Oeu020920.1 Olea europaea HOM05D002063 ORTHO05D002075 3.5e-22 110.5 534 26.0
Lsat_1_v5_gn_8_141101 Lactuca sativa HOM05D002063 ORTHO05D002075 1.7e-21 108.2 483 27.3
Cfa023598 Carpinus fangiana HOM05D002063 ORTHO05D002075 2.2e-21 107.8 771 23.5
Manes.01G132600 Manihot esculenta HOM05D002063 ORTHO05D002075 5.0e-21 106.7 716 23.6
Duzib147G0122 Durio zibethinus HOM05D002063 ORTHO05D002075 6.5e-21 106.3 731 24.1
Haze_13399 Corylus avellana HOM05D002063 ORTHO05D002075 1.1e-20 105.5 763 24.1
Cpa.g.sc52.165 Carica papaya HOM05D002063 ORTHO05D002075 4.2e-20 103.6 686 23.3
Rhsim06G0130600 Rhododendron simsii HOM05D002063 ORTHO05D002075 1.2e-19 102.1 580 26.4
HanXRQChr17g0559231 Helianthus annuus HOM05D002063 ORTHO05D002075 1.6e-19 101.7 497 26.2
CAN.G1081.10 Capsicum annuum HOM05D002063 ORTHO05D002075 2.7e-19 100.9 642 24.1
Eucgr.K01136 Eucalyptus grandis HOM05D002063 ORTHO05D002075 2.7e-19 100.9 687 25.0
TAR624G0717 Trochodendron aralioides HOM05D002063 ORTHO05D002075 2.7e-19 100.9 662 23.7
Nitab4.5_0000249g0250 Nicotiana tabacum HOM05D002063 ORTHO05D002075 6.1e-19 99.8 591 25.7
ECA233G1685 Erigeron canadensis HOM05D002063 ORTHO05D002075 1.0e-18 99.0 533 25.5
Lj8A100T109 Lonicera japonica HOM05D002063 ORTHO05D002075 1.4e-18 98.6 599 26.2
TWI14G1322 Tripterygium wilfordii HOM05D002063 ORTHO05D002075 1.8e-18 98.2 699 24.9
Aa31LG5G5900 Aethionema arabicum HOM05D002063 ORTHO05D002075 6.8e-18 96.3 602 23.4
Gohir.D12G091600 Gossypium hirsutum HOM05D002063 ORTHO05D002075 6.8e-18 96.3 716 23.3
TWI59G1423 Tripterygium wilfordii HOM05D002063 ORTHO05D002075 6.8e-18 96.3 697 24.1
COL.COLO4_33589 Corchorus olitorius HOM05D002063 ORTHO05D002075 8.8e-18 95.9 726 23.3
Thhalv10016438m.g Eutrema salsugineum HOM05D002063 ORTHO05D002075 8.8e-18 95.9 596 24.5
Gohir.A12G091500 Gossypium hirsutum HOM05D002063 ORTHO05D002075 1.2e-17 95.5 713 23.4
Gorai.008G099200 Gossypium raimondii HOM05D002063 ORTHO05D002075 1.2e-17 95.5 714 23.4
AT2G30990 Arabidopsis thaliana HOM05D002063 ORTHO05D002075 1.5e-17 95.1 612 24.5
Peaxi162Scf00229g01212 Petunia axillaris HOM05D002063 ORTHO05D002075 1.5e-17 95.1 645 25.3
AL4G26030 Arabidopsis lyrata HOM05D002063 ORTHO05D002075 2.0e-17 94.7 606 24.4
vmacro12381 Vaccinium macrocarpon HOM05D002063 ORTHO05D002075 4.4e-17 93.6 598 25.1
Peaxi162Scf00469g00410 Petunia axillaris HOM05D002063 ORTHO05D002075 9.8e-17 92.4 692 23.7
Nitab4.5_0006142g0010 Nicotiana tabacum HOM05D002063 ORTHO05D002075 1.3e-16 92.0 632 24.8
PGSC0003DMG400020440 Solanum tuberosum HOM05D002063 ORTHO05D002075 1.7e-16 91.7 630 24.8
A05p14640 Brassica napus HOM05D002063 ORTHO05D002075 2.8e-16 90.9 509 25.3
Thecc.01G151300 Theobroma cacao HOM05D002063 ORTHO05D002075 2.8e-16 90.9 735 23.5
Atru.chr6.2786 Acer truncatum HOM05D002063 ORTHO05D002075 3.7e-16 90.5 730 23.3
Ciclev10014575m.g Citrus clementina HOM05D002063 ORTHO05D002075 4.8e-16 90.1 689 24.5
CAN.G1716.2 Capsicum annuum HOM05D002063 ORTHO05D002075 1.1e-15 89.0 631 25.7
BcaB02g10357 Brassica carinata HOM05D002063 ORTHO05D002075 1.8e-15 88.2 516 24.8
Sp4g13480 Schrenkiella parvula HOM05D002063 ORTHO05D002075 3.1e-15 87.4 622 23.5
Sabra14G0107900 Salix brachista HOM05D002063 ORTHO05D002075 4.1e-15 87.0 707 24.3
CARHR124530 Cardamine hirsuta HOM05D002063 ORTHO05D002075 9.1e-15 85.9 591 23.4
PGSC0003DMG400015369 Solanum tuberosum HOM05D002063 ORTHO05D002075 1.2e-14 85.5 345 29.3
Actinidia11158 Actinidia chinensis HOM05D002063 ORTHO05D002075 1.6e-14 85.1 553 24.4
Sopen07g027090 Solanum pennellii HOM05D002063 ORTHO05D002075 2.0e-14 84.7 641 25.1
CiPaw.03G194900 Carya illinoinensis HOM05D002063 ORTHO05D002075 2.7e-14 84.3 762 23.0
Potri.014G142800 Populus trichocarpa HOM05D002063 ORTHO05D002075 2.7e-14 84.3 701 23.0
Nitab4.5_0005828g0030 Nicotiana tabacum HOM05D002063 ORTHO05D002075 1.0e-13 82.4 600 24.8
BraA05t20394Z Brassica rapa HOM05D002063 ORTHO05D002075 1.3e-13 82.0 458 26.2
Nn1g04435 Nelumbo nucifera HOM05D002063 ORTHO05D002075 1.7e-13 81.6 681 22.9
Sopen12g005710 Solanum pennellii HOM05D002063 ORTHO05D002075 2.3e-13 81.3 634 25.6
BcaC02g11186 Brassica carinata HOM05D002063 ORTHO05D002075 2.9e-13 80.9 526 25.5
C04p19490 Brassica napus HOM05D002063 ORTHO05D002075 2.9e-13 80.9 526 25.5
BolC4t23481H Brassica oleracea HOM05D002063 ORTHO05D002075 2.9e-13 80.9 526 25.5
unitig_62.g23138 Utricularia gibba HOM05D002063 ORTHO05D002075 2.9e-13 80.9 591 24.4
unitig_85.g27375 Utricularia gibba HOM05D002063 ORTHO05D002075 6.6e-13 79.7 564 23.8
BcaB06g28471 Brassica carinata HOM05D002063 ORTHO05D002075 1.5e-12 78.6 581 22.5
BolC4t27518H Brassica oleracea HOM05D002063 ORTHO05D002075 1.5e-12 78.6 581 22.5
CiPaw.04G133300 Carya illinoinensis HOM05D002063 ORTHO05D002075 1.5e-12 78.6 762 22.6
Manes.17G056500 Manihot esculenta HOM05D002063 ORTHO05D002075 1.9e-12 78.2 682 22.9
PSO229G0031 Papaver somniferum HOM05D002063 ORTHO05D002075 2.5e-12 77.8 683 24.7
PSO675G5163 Papaver somniferum HOM05D002063 ORTHO05D002075 2.5e-12 77.8 688 24.1
Atru.chr6.2783 Acer truncatum HOM05D002063 ORTHO05D002075 3.3e-12 77.4 709 22.6
Carub.0004s1221 Capsella rubella HOM05D002063 ORTHO05D002075 4.2e-12 77.0 623 23.0
Lj3g0021644 Lotus japonicus HOM05D002063 ORTHO05D002075 4.2e-12 77.0 655 24.9
Solyc12g013960.3 Solanum lycopersicum HOM05D002063 ORTHO05D002075 4.2e-12 77.0 598 25.9
QL08p041891 Quercus lobata HOM05D002063 ORTHO05D002075 7.2e-12 76.3 752 21.8
Aqoxy1G02039 Aquilegia oxysepala HOM05D002063 ORTHO05D002075 1.2e-11 75.5 662 23.3
Nn1g09178 Nelumbo nucifera HOM05D002063 ORTHO05D002075 1.2e-11 75.5 695 23.9
Lj1A680T13 Lonicera japonica HOM05D002063 ORTHO05D002075 1.6e-11 75.1 499 24.6
CiPaw.10G059700 Carya illinoinensis HOM05D002063 ORTHO05D002075 2.8e-11 74.3 414 25.6
BraA04t17897Z Brassica rapa HOM05D002063 ORTHO05D002075 3.6e-11 73.9 588 22.4
A04p23710 Brassica napus HOM05D002063 ORTHO05D002075 4.7e-11 73.6 588 22.4
Lju1655A0T37 Lonicera japonica HOM05D002063 ORTHO05D002075 4.7e-11 73.6 77 51.9
AUR62037396 Chenopodium quinoa HOM05D002063 ORTHO05D002075 6.1e-11 73.2 634 23.2
FAN14G2532 Fragaria x ananassa HOM05D002063 ORTHO05D002075 6.1e-11 73.2 504 24.4
Hund00879 Selenicereus undatus HOM05D002063 ORTHO05D002075 6.1e-11 73.2 109 42.2
SGA_v2.0_scaffold313G48292 Striga asiatica HOM05D002063 ORTHO05D002075 8.0e-11 72.8 544 25.6
Glyma.06G276800 Glycine max HOM05D002063 ORTHO05D002075 1.4e-10 72.0 72 54.2
MD09G1236600 Malus domestica HOM05D002063 ORTHO05D002075 1.8e-10 71.6 77 50.6
Psat0s3463g0040 Pisum sativum HOM05D002063 ORTHO05D002075 1.8e-10 71.6 78 50.0
Glyma.12G128800 Glycine max HOM05D002063 ORTHO05D002075 2.3e-10 71.2 75 54.7
Medtr4g080050 Medicago truncatula HOM05D002063 ORTHO05D002075 2.3e-10 71.2 76 51.3
THA.LOC104815844 Tarenaya hassleriana HOM05D002063 ORTHO05D002075 2.3e-10 71.2 638 22.9
Phvul.011G129400 Phaseolus vulgaris HOM05D002063 ORTHO05D002075 3.0e-10 70.9 76 48.7
TPR.G4349 Trifolium pratense HOM05D002063 ORTHO05D002075 3.0e-10 70.9 73 56.2
Ca_18870_v3 Cicer arietinum L. HOM05D002063 ORTHO05D002075 4.0e-10 70.5 74 52.7
Rhsim04G0074600 Rhododendron simsii HOM05D002063 ORTHO05D002075 4.0e-10 70.5 79 46.8
COL.COLO4_31282 Corchorus olitorius HOM05D002063 ORTHO05D002075 8.9e-10 69.3 427 23.9
Prupe.3G117500 Prunus persica HOM05D002063 ORTHO05D002075 8.9e-10 69.3 77 48.1
Lj3g0021532 Lotus japonicus HOM05D002063 ORTHO05D002075 1.2e-09 68.9 74 48.6
VMungo1127G1441 Vigna mungo HOM05D002063 ORTHO05D002075 1.2e-09 68.9 74 51.4
arahy.Tifrunner.gnm1.ann1.UD7KHE Arachis hypogaea HOM05D002063 ORTHO05D002075 1.5e-09 68.6 77 45.5
Dinv16781 Davidia involucrata HOM05D002063 ORTHO05D002075 1.5e-09 68.6 396 22.5
HanXRQChr17g0564361 Helianthus annuus HOM05D002063 ORTHO05D002075 1.5e-09 68.6 621 24.0
RcHm_v2.0_Chr2g0129801 Rosa chinensis HOM05D002063 ORTHO05D002075 1.5e-09 68.6 75 50.7
arahy.Tifrunner.gnm1.ann1.8LST2U Arachis hypogaea HOM05D002063 ORTHO05D002075 2.0e-09 68.2 77 45.5
FAN05G4781 Fragaria x ananassa HOM05D002063 ORTHO05D002075 3.4e-09 67.4 489 24.3
MD17G1266400 Malus domestica HOM05D002063 ORTHO05D002075 3.4e-09 67.4 79 49.4
unitig_46.g18266 Utricularia gibba HOM05D002063 ORTHO05D002075 4.4e-09 67.0 451 25.5
AUR62041743 Chenopodium quinoa HOM05D002063 ORTHO05D002075 5.7e-09 66.6 630 23.0
CsaV3_7G005700 Cucumis sativus L. HOM05D002063 ORTHO05D002075 5.7e-09 66.6 715 22.5
ClCG07G002750 Citrullus lanatus HOM05D002063 ORTHO05D002075 7.5e-09 66.2 722 22.3
MELO3C018721.2 Cucumis melo HOM05D002063 ORTHO05D002075 7.5e-09 66.2 730 22.6
FvH4_6g27510 Fragaria vesca HOM05D002063 ORTHO05D002075 7.5e-09 66.2 75 49.3
FAN09G1545 Fragaria x ananassa HOM05D002063 ORTHO05D002075 7.5e-09 66.2 75 49.3
Manes.01G132900 Manihot esculenta HOM05D002063 ORTHO05D002075 9.8e-09 65.9 98 38.8
SalBow7G4346 Salvia bowleyana HOM05D002063 ORTHO05D002075 9.8e-09 65.9 262 30.9
Ah.01g015800 Amaranthus hybridus HOM05D002063 ORTHO05D002075 1.3e-08 65.5 73 49.3
C04p60150 Brassica napus HOM05D002063 ORTHO05D002075 1.3e-08 65.5 75 42.7
Hund21171 Selenicereus undatus HOM05D002063 ORTHO05D002075 2.2e-08 64.7 387 22.2
VMungo1080G0812 Vigna mungo HOM05D002063 ORTHO05D002075 2.2e-08 64.7 537 23.8
Eucgr.A01920 Eucalyptus grandis HOM05D002063 ORTHO05D002075 2.8e-08 64.3 649 22.0
Sc12g0003530 Simmondsia chinensis HOM05D002063 ORTHO05D002075 2.8e-08 64.3 610 23.8
Potri.004G057800 Populus trichocarpa HOM05D002063 ORTHO05D002075 3.7e-08 63.9 407 23.6
PGR142G0459 Punica granatum HOM05D002063 ORTHO05D002075 3.7e-08 63.9 77 45.5
BcaB06g28402 Brassica carinata HOM05D002063 ORTHO05D002075 4.9e-08 63.5 590 22.4
MBI07_g09571_MAGBIO Magnolia biondii HOM05D002063 ORTHO05D002075 4.9e-08 63.5 702 21.7
arahy.Tifrunner.gnm1.ann1.5IK05W Arachis hypogaea HOM05D002063 ORTHO05D002075 6.3e-08 63.2 572 24.0
Psat5g276520 Pisum sativum HOM05D002063 ORTHO05D002075 6.3e-08 63.2 128 41.4
Solyc07g055140.3 Solanum lycopersicum HOM05D002063 ORTHO05D002075 6.3e-08 63.2 348 27.9
Ah.01g003610 Amaranthus hybridus HOM05D002063 ORTHO05D002075 8.3e-08 62.8 73 46.6
arahy.Tifrunner.gnm1.ann1.HJ4PFL Arachis hypogaea HOM05D002063 ORTHO05D002075 1.1e-07 62.4 74 45.9
CANSAT64G2021 Cannabis sativa HOM05D002063 ORTHO05D002075 1.1e-07 62.4 78 44.9
Lalb_Chr14g0367531 Lupinus albus HOM05D002063 ORTHO05D002075 1.8e-07 61.6 78 46.2
RcHm_v2.0_Chr2g0129871 Rosa chinensis HOM05D002063 ORTHO05D002075 1.8e-07 61.6 87 41.4
MELO3C002658.2 Cucumis melo HOM05D002063 ORTHO05D002075 2.4e-07 61.2 417 23.7
SEGI_16088 Sequoiadendron giganteum HOM05D002063 ORTHO05D002075 2.4e-07 61.2 72 47.2
Sed0003403 Sechium edule HOM05D002063 ORTHO05D002075 3.2e-07 60.8 502 23.9
Sed0008738 Sechium edule HOM05D002063 ORTHO05D002075 3.2e-07 60.8 109 37.6
arahy.Tifrunner.gnm1.ann1.F9SG0G Arachis hypogaea HOM05D002063 ORTHO05D002075 4.1e-07 60.5 575 24.2
MELO3C013577.2 Cucumis melo HOM05D002063 ORTHO05D002075 4.1e-07 60.5 92 38.0
Medtr2g093020 Medicago truncatula HOM05D002063 ORTHO05D002075 4.1e-07 60.5 137 37.2
Lj6g0027755 Lotus japonicus HOM05D002063 ORTHO05D002075 5.4e-07 60.1 398 22.1
Phvul.006G175400 Phaseolus vulgaris HOM05D002063 ORTHO05D002075 5.4e-07 60.1 406 22.7
GSVIVG01021224001 Vitis vinifera HOM05D002063 ORTHO05D002075 7.0e-07 59.7 410 20.7
Sed0012556 Sechium edule HOM05D002063 ORTHO05D002075 9.2e-07 59.3 398 24.9
RcHm_v2.0_Chr7g0242601 Rosa chinensis HOM05D002063 ORTHO05D002075 1.2e-06 58.9 87 40.2
ATR0602G233 Amborella trichopoda HOM05D002063 ORTHO05D002075 1.6e-06 58.5 72 41.7
MSTRG.16154 Avicennia marina HOM05D002063 ORTHO05D002075 1.6e-06 58.5 381 24.7
CSS0039343 Camellia sinensis var. sinensis HOM05D002063 ORTHO05D002075 1.6e-06 58.5 479 25.7
Ciclev10014532m.g Citrus clementina HOM05D002063 ORTHO05D002075 1.6e-06 58.5 381 24.4
Nitab4.5_0000605g0110 Nicotiana tabacum HOM05D002063 ORTHO05D002075 1.6e-06 58.5 285 25.6
unitig_49.g30741 Utricularia gibba HOM05D002063 ORTHO05D002075 1.6e-06 58.5 74 39.2
unitig_50.g33285 Utricularia gibba HOM05D002063 ORTHO05D002075 1.6e-06 58.5 74 39.2
HPP92_006254 Vanilla planifolia HOM05D002063 ORTHO05D002075 1.6e-06 58.5 75 44.0
CDE02G4132 Ceratophyllum demersum HOM05D002063 ORTHO05D002075 2.0e-06 58.2 566 22.6
Dinv40689 Davidia involucrata HOM05D002063 ORTHO05D002075 2.0e-06 58.2 334 23.4
FAN02G3018 Fragaria x ananassa HOM05D002063 ORTHO05D002075 2.0e-06 58.2 493 23.5
Nitab4.5_0006324g0010 Nicotiana tabacum HOM05D002063 ORTHO05D002075 2.0e-06 58.2 274 25.5
Peaxi162Scf00940g00038 Petunia axillaris HOM05D002063 ORTHO05D002075 2.0e-06 58.2 87 41.4
Phvul.005G094800 Phaseolus vulgaris HOM05D002063 ORTHO05D002075 2.0e-06 58.2 571 22.1
VMungo0540G2378 Vigna mungo HOM05D002063 ORTHO05D002075 2.0e-06 58.2 422 21.6
DCAR_013273 Daucus carota HOM05D002063 ORTHO05D002075 2.7e-06 57.8 85 42.4
MD17G1266300 Malus domestica HOM05D002063 ORTHO05D002075 2.7e-06 57.8 81 42.0
ClCG03G007640 Citrullus lanatus HOM05D002063 ORTHO05D002075 3.5e-06 57.4 411 23.6
CsaV3_1G033290 Cucumis sativus L. HOM05D002063 ORTHO05D001117 4.5e-06 57.0 389 23.7
Glyma.13G229000 Glycine max HOM05D002063 ORTHO05D002075 4.5e-06 57.0 432 24.3
Hund07788 Selenicereus undatus HOM05D002063 ORTHO05D002075 4.5e-06 57.0 74 39.2
AUR62027692 Chenopodium quinoa HOM05D002063 ORTHO05D002075 7.8e-06 56.2 385 23.4


User provided reference genes

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