Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00197 Erythranthe guttata HOM05D003263 ORTHO05D004801 4.2e-74 281.2 134 100.0
Migut.K00926 Erythranthe guttata HOM05D003263 ORTHO05D004801 4.5e-44 181.4 116 80.2
Migut.H02232 Erythranthe guttata HOM05D003263 ORTHO05D004801 3.3e-42 175.3 124 73.4
MSTRG.3699 Avicennia marina HOM05D003263 ORTHO05D004801 2.8e-41 172.2 116 74.1
MSTRG.15657 Avicennia marina HOM05D003263 ORTHO05D004801 3.6e-41 171.8 125 71.2
Oeu062704.1 Olea europaea HOM05D003263 ORTHO05D004801 6.1e-41 171.0 114 77.2
SGA_v2.0_scaffold108G30966 Striga asiatica HOM05D003263 ORTHO05D004801 1.0e-40 170.2 124 71.0
SGA_v2.0_scaffold2G00947 Striga asiatica HOM05D003263 ORTHO05D004801 2.3e-40 169.1 124 70.2
Oeu030292.1 Olea europaea HOM05D003263 ORTHO05D004801 3.0e-40 168.7 105 81.0
HanXRQChr07g0191741 Helianthus annuus HOM05D003263 ORTHO05D004801 2.6e-39 165.6 119 69.7
SalBow5G3125 Salvia bowleyana HOM05D003263 ORTHO05D004801 2.6e-39 165.6 116 74.1
HanXRQChr14g0444641 Helianthus annuus HOM05D003263 ORTHO05D004801 3.7e-38 161.8 113 72.6
Lsat_1_v5_gn_3_63961 Lactuca sativa HOM05D003263 ORTHO05D004801 1.4e-37 159.8 119 69.7
ECA238G3173 Erigeron canadensis HOM05D003263 ORTHO05D004801 1.8e-37 159.5 125 68.0
Actinidia28797 Actinidia chinensis HOM05D003263 ORTHO05D004801 4.1e-37 158.3 124 66.9
HanXRQChr17g0559491 Helianthus annuus HOM05D003263 ORTHO05D004801 4.1e-37 158.3 105 74.3
Manes.02G078500 Manihot esculenta HOM05D003263 ORTHO05D004801 4.1e-37 158.3 137 63.5
Dinv28178 Davidia involucrata HOM05D003263 ORTHO05D004801 4.6e-36 154.8 125 67.2
CiPaw.03G074100 Carya illinoinensis HOM05D003263 ORTHO05D004801 1.7e-35 152.9 132 64.4
arahy.Tifrunner.gnm1.ann1.AUXW6G Arachis hypogaea HOM05D003263 ORTHO05D004801 2.3e-35 152.5 119 68.1
Actinidia35722 Actinidia chinensis HOM05D003263 ORTHO05D004801 2.9e-35 152.1 118 71.2
unitig_748.g8633 Utricularia gibba HOM05D003263 ORTHO05D004801 2.9e-35 152.1 112 69.6
Atru.chr1.2038 Acer truncatum HOM05D003263 ORTHO05D004801 3.9e-35 151.8 117 69.2
Sed0005557 Sechium edule HOM05D003263 ORTHO05D004801 3.9e-35 151.8 136 63.2
PGR042G3530 Punica granatum HOM05D003263 ORTHO05D004801 5.0e-35 151.4 126 63.5
arahy.Tifrunner.gnm1.ann1.ZZ0CH2 Arachis hypogaea HOM05D003263 ORTHO05D004801 6.6e-35 151.0 111 71.2
Manes.01G120700 Manihot esculenta HOM05D003263 ORTHO05D004801 6.6e-35 151.0 115 69.6
THA.LOC104822242 Tarenaya hassleriana HOM05D003263 ORTHO05D004801 8.6e-35 150.6 137 61.3
Glyma.11G214800 Glycine max HOM05D003263 ORTHO05D004801 1.5e-34 149.8 132 62.1
Lalb_Chr15g0085021 Lupinus albus HOM05D003263 ORTHO05D004801 1.5e-34 149.8 119 65.5
Potri.004G082800 Populus trichocarpa HOM05D003263 ORTHO05D004801 1.5e-34 149.8 116 67.2
Dinv19049 Davidia involucrata HOM05D003263 ORTHO05D004801 2.5e-34 149.1 117 69.2
MD09G1268900 Malus domestica HOM05D003263 ORTHO05D004801 2.5e-34 149.1 115 65.2
CSS0018871 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 4.3e-34 148.3 113 68.1
MD17G1267300 Malus domestica HOM05D003263 ORTHO05D004801 5.6e-34 147.9 115 64.3
Nn4g24447 Nelumbo nucifera HOM05D003263 ORTHO05D004801 7.3e-34 147.5 115 67.0
THA.LOC104805635 Tarenaya hassleriana HOM05D003263 ORTHO05D004801 9.5e-34 147.1 114 68.4
CAN.G222.62 Capsicum annuum HOM05D003263 ORTHO05D004801 1.2e-33 146.7 113 66.4
Lj6g0025109 Lotus japonicus HOM05D003263 ORTHO05D004801 1.2e-33 146.7 120 65.8
TAR629G0765 Trochodendron aralioides HOM05D003263 ORTHO05D004801 1.2e-33 146.7 113 67.3
Cpa.g.sc116.77 Carica papaya HOM05D003263 ORTHO05D004801 1.6e-33 146.4 118 64.4
Eucgr.J01621 Eucalyptus grandis HOM05D003263 ORTHO05D004801 1.6e-33 146.4 117 65.8
Glyma.18G041700 Glycine max HOM05D003263 ORTHO05D004801 1.6e-33 146.4 132 61.4
Peaxi162Scf00464g00325 Petunia axillaris HOM05D003263 ORTHO05D004801 1.6e-33 146.4 113 66.4
Prupe.3G165400 Prunus persica HOM05D003263 ORTHO05D004801 1.6e-33 146.4 107 68.2
CANSAT56G4352 Cannabis sativa HOM05D003263 ORTHO05D004801 2.1e-33 146.0 138 58.7
Potri.017G136133 Populus trichocarpa HOM05D003263 ORTHO05D004801 2.1e-33 146.0 117 65.8
Ciclev10019002m.g Citrus clementina HOM05D003263 ORTHO05D004801 2.8e-33 145.6 115 67.0
Sopen11g006260 Solanum pennellii HOM05D003263 ORTHO05D004801 3.6e-33 145.2 115 67.8
vmacro18524 Vaccinium macrocarpon HOM05D003263 ORTHO05D004801 4.7e-33 144.8 126 62.7
Rhsim08G0019700 Rhododendron simsii HOM05D003263 ORTHO05D004801 8.0e-33 144.1 125 63.2
TWI77G0544 Tripterygium wilfordii HOM05D003263 ORTHO05D004801 8.0e-33 144.1 135 60.0
Nitab4.5_0006562g0010 Nicotiana tabacum HOM05D003263 ORTHO05D004801 1.0e-32 143.7 113 68.1
Nitab4.5_0011135g0010 Nicotiana tabacum HOM05D003263 ORTHO05D004801 1.0e-32 143.7 113 68.1
Phvul.001G229000 Phaseolus vulgaris HOM05D003263 ORTHO05D004801 1.0e-32 143.7 132 62.9
Psat5g119880 Pisum sativum HOM05D003263 ORTHO05D004801 1.0e-32 143.7 122 63.9
Solyc11g011470.2 Solanum lycopersicum HOM05D003263 ORTHO05D004801 1.0e-32 143.7 116 67.2
PGSC0003DMG400013309 Solanum tuberosum HOM05D003263 ORTHO05D004801 1.0e-32 143.7 115 67.0
BraA04t16733Z Brassica rapa HOM05D003263 ORTHO05D004801 1.4e-32 143.3 124 64.5
Ca_17086_v3 Cicer arietinum L. HOM05D003263 ORTHO05D004801 1.4e-32 143.3 121 65.3
VMungo1383G2082 Vigna mungo HOM05D003263 ORTHO05D004801 1.8e-32 142.9 132 62.1
Medtr3g065130 Medicago truncatula HOM05D003263 ORTHO05D004801 3.1e-32 142.1 127 63.0
TPR.G23206 Trifolium pratense HOM05D003263 ORTHO05D004801 3.1e-32 142.1 120 64.2
TWI74G0116 Tripterygium wilfordii HOM05D003263 ORTHO05D004801 3.1e-32 142.1 137 58.4
BcaB06g27086 Brassica carinata HOM05D003263 ORTHO05D004801 4.0e-32 141.7 124 63.7
A04p10660 Brassica napus HOM05D003263 ORTHO05D004801 4.0e-32 141.7 124 63.7
Aqoxy3G04075 Aquilegia oxysepala HOM05D003263 ORTHO05D004801 5.2e-32 141.4 119 65.5
CDE05G1041 Ceratophyllum demersum HOM05D003263 ORTHO05D004801 5.2e-32 141.4 113 63.7
Lalb_Chr18g0053541 Lupinus albus HOM05D003263 ORTHO05D004801 5.2e-32 141.4 130 59.2
AL1G43210 Arabidopsis lyrata HOM05D003263 ORTHO05D004801 1.2e-31 140.2 115 67.0
Thhalv10027640m.g Eutrema salsugineum HOM05D003263 ORTHO05D004801 1.5e-31 139.8 120 64.2
CDE05G1320 Ceratophyllum demersum HOM05D003263 ORTHO05D004801 2.0e-31 139.4 113 63.7
Aa31LG9G17530 Aethionema arabicum HOM05D003263 ORTHO05D004801 2.6e-31 139.0 137 58.4
RcHm_v2.0_Chr3g0491991 Rosa chinensis HOM05D003263 ORTHO05D004801 2.6e-31 139.0 124 62.9
BcaC02g09578 Brassica carinata HOM05D003263 ORTHO05D004801 3.4e-31 138.7 124 62.9
C04p44380 Brassica napus HOM05D003263 ORTHO05D004801 3.4e-31 138.7 124 62.9
BolC4t26009H Brassica oleracea HOM05D003263 ORTHO05D004801 3.4e-31 138.7 124 62.9
FAN23G0774 Fragaria x ananassa HOM05D003263 ORTHO05D004801 3.4e-31 138.7 118 63.6
FAN26G0816 Fragaria x ananassa HOM05D003263 ORTHO05D004801 3.4e-31 138.7 118 63.6
PSO478G1645 Papaver somniferum HOM05D003263 ORTHO05D004801 4.4e-31 138.3 140 56.4
AL7G46270 Arabidopsis lyrata HOM05D003263 ORTHO05D004801 9.8e-31 137.1 116 64.7
AT5G37510 Arabidopsis thaliana HOM05D003263 ORTHO05D004801 9.8e-31 137.1 116 64.7
CARHR215400 Cardamine hirsuta HOM05D003263 ORTHO05D004801 1.3e-30 136.7 116 63.8
PSO017G4553 Papaver somniferum HOM05D003263 ORTHO05D004801 1.7e-30 136.3 138 56.5
Aa31LG9G17520 Aethionema arabicum HOM05D003263 ORTHO05D004801 2.2e-30 136.0 129 58.9
ClCG05G010610 Citrullus lanatus HOM05D003263 ORTHO05D004801 3.7e-30 135.2 137 57.7
Gorai.001G197100 Gossypium raimondii HOM05D003263 ORTHO05D004801 3.7e-30 135.2 118 65.3
Sed0016313 Sechium edule HOM05D003263 ORTHO05D004801 3.7e-30 135.2 135 57.8
Carub.0007s3268 Capsella rubella HOM05D003263 ORTHO05D004801 8.3e-30 134.0 116 62.1
Gohir.D07G183900 Gossypium hirsutum HOM05D003263 ORTHO05D004801 8.3e-30 134.0 117 65.0
HPP92_020298 Vanilla planifolia HOM05D003263 ORTHO05D004801 1.1e-29 133.7 112 62.5
FvH4_1g30070 Fragaria vesca HOM05D003263 ORTHO05D004801 1.4e-29 133.3 120 62.5
CsaV3_3G017880 Cucumis sativus L. HOM05D003263 ORTHO05D004801 2.4e-29 132.5 139 56.1
TAR371G0371 Trochodendron aralioides HOM05D003263 ORTHO05D004801 2.4e-29 132.5 105 64.8
MELO3C020331.2 Cucumis melo HOM05D003263 ORTHO05D004801 3.2e-29 132.1 139 56.1
AUR62037782 Chenopodium quinoa HOM05D003263 ORTHO05D004801 4.1e-29 131.7 118 62.7
FAN19G0316 Fragaria x ananassa HOM05D003263 ORTHO05D004801 4.1e-29 131.7 103 68.0
Cfa007786 Carpinus fangiana HOM05D003263 ORTHO05D004801 5.4e-29 131.3 113 64.6
Haze_14285 Corylus avellana HOM05D003263 ORTHO05D004801 7.0e-29 131.0 113 64.6
DCAR_014159 Daucus carota HOM05D003263 ORTHO05D004801 7.0e-29 131.0 129 58.1
Ah.10g032470 Amaranthus hybridus HOM05D003263 ORTHO05D004801 1.6e-28 129.8 116 59.5
Ah.10g032480 Amaranthus hybridus HOM05D003263 ORTHO05D004801 1.6e-28 129.8 116 59.5
Duzib133G1400 Durio zibethinus HOM05D003263 ORTHO05D004801 7.8e-28 127.5 116 62.1
AUR62042225 Chenopodium quinoa HOM05D003263 ORTHO05D004801 1.3e-27 126.7 94 71.3
MBI19_g09384_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D004801 1.3e-27 126.7 121 57.9
EL10Ac2g03207 Beta vulgaris HOM05D003263 ORTHO05D004801 1.7e-27 126.3 123 56.9
Gorai.001G204300 Gossypium raimondii HOM05D003263 ORTHO05D004801 3.0e-27 125.6 116 60.3
Thecc.04G063600 Theobroma cacao HOM05D003263 ORTHO05D004801 3.0e-27 125.6 117 61.5
Thecc.K0008100 Theobroma cacao HOM05D003263 ORTHO05D004801 3.0e-27 125.6 117 61.5
Gohir.A07G176600 Gossypium hirsutum HOM05D003263 ORTHO05D004801 5.0e-27 124.8 116 59.5
COL.COLO4_13315 Corchorus olitorius HOM05D003263 ORTHO05D004801 6.6e-27 124.4 86 73.3
Duzib138G0925 Durio zibethinus HOM05D003263 ORTHO05D004801 1.5e-26 123.2 116 59.5
QL02p059434 Quercus lobata HOM05D003263 ORTHO05D004801 4.3e-26 121.7 115 59.1
Os03g0713400 Oryza sativa ssp. japonica HOM05D003263 ORTHO05D004801 5.6e-26 121.3 136 51.5
SHI30113 Sapria himalayana HOM05D003263 ORTHO05D004801 9.5e-26 120.6 118 54.2
Hund13092 Selenicereus undatus HOM05D003263 ORTHO05D004801 1.2e-25 120.2 93 64.5
Zm00001eb216210 Zea mays HOM05D003263 ORTHO05D004801 2.8e-25 119.0 115 56.5
Sc14g0006900 Simmondsia chinensis HOM05D003263 ORTHO05D004801 3.6e-25 118.6 114 57.9
Zm00001eb055050 Zea mays HOM05D003263 ORTHO05D004801 4.0e-24 115.2 115 55.7
ATR0118G003 Amborella trichopoda HOM05D003263 ORTHO05D004801 8.9e-24 114.0 113 58.4
QL04p097132 Quercus lobata HOM05D003263 ORTHO05D000041 1.7e-22 109.8 71 74.6
Eucgr.J01637 Eucalyptus grandis HOM05D003263 ORTHO05D004801 1.9e-21 106.3 76 71.1
SEGI_21193 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 6.6e-19 97.8 102 55.9
AagrBONN_evm.TU.Sc2ySwM_228.2430 Anthoceros agrestis HOM05D003263 ORTHO05D004801 2.5e-18 95.9 64 67.2
CBR_g6354 Chara braunii HOM05D003263 ORTHO05D004801 1.8e-16 89.7 63 63.5
Mapoly0153s0030 Marchantia polymorpha HOM05D003263 ORTHO05D004801 1.8e-16 89.7 56 73.2
Cc04_g05630 Coffea canephora HOM05D003263 ORTHO05D004801 4.0e-16 88.6 54 77.8
SMO331G0029 Selaginella moellendorffii HOM05D003263 ORTHO05D004801 5.2e-16 88.2 73 56.2
Pp3c1_34100 Physcomitrium patens HOM05D003263 ORTHO05D004801 2.0e-15 86.3 71 57.7
Pp3c1_34110 Physcomitrium patens HOM05D003263 ORTHO05D004801 2.0e-15 86.3 71 57.7
Pp3c1_34140 Physcomitrium patens HOM05D003263 ORTHO05D004801 2.0e-15 86.3 71 57.7
Pp3c19_19270 Physcomitrium patens HOM05D003263 ORTHO05D004801 3.4e-15 85.5 74 56.8
Cre12.g535950 Chlamydomonas reinhardtii HOM05D003263 ORTHO05D004801 7.6e-15 84.3 47 76.6
MCO08G340 Micromonas commoda HOM05D003263 ORTHO05D004801 4.9e-14 81.6 63 58.7
PRCOL_00000346 Prasinoderma coloniale HOM05D003263 ORTHO05D004801 4.6e-12 75.1 47 68.1
Cc07_g13220 Coffea canephora HOM05D003263 ORTHO05D004801 6.6e-11 71.2 54 64.8
Gohir.A07G170100 Gossypium hirsutum HOM05D003263 ORTHO05D004801 6.6e-11 71.2 54 64.8
Gohir.D07G176300 Gossypium hirsutum HOM05D003263 ORTHO05D004801 6.6e-11 71.2 54 64.8
CSS0022568 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 8.6e-11 70.9 116 40.5
GSVIVG01030914001 Vitis vinifera HOM05D003263 ORTHO05D004801 8.6e-11 70.9 54 63.0
Haze_26802 Corylus avellana HOM05D003263 ORTHO05D004801 1.5e-10 70.1 69 46.4
arahy.Tifrunner.gnm1.ann1.5H82NF Arachis hypogaea HOM05D003263 ORTHO05D004801 4.3e-10 68.6 54 61.1
arahy.Tifrunner.gnm1.ann1.RIP12T Arachis hypogaea HOM05D003263 ORTHO05D004801 4.3e-10 68.6 54 61.1
arahy.Tifrunner.gnm1.ann1.SN393R Arachis hypogaea HOM05D003263 ORTHO05D004801 4.3e-10 68.6 54 61.1
arahy.Tifrunner.gnm1.ann1.VKQW11 Arachis hypogaea HOM05D003263 ORTHO05D004801 4.3e-10 68.6 54 61.1
MD16G1264400 Malus domestica HOM05D003263 ORTHO05D004801 1.2e-07 60.5 41 68.3
Cfa025667 Carpinus fangiana HOM05D003263 ORTHO05D004801 9.9e-07 57.4 36 63.9
QL08p053439 Quercus lobata HOM05D003263 ORTHO05D004801 9.9e-07 57.4 30 80.0
CBR_g26339 Chara braunii HOM05D004987 ORTHO05D005960 3.8e-06 55.5 47 46.8


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