Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00169 Erythranthe guttata HOM05D000265 ORTHO05D000161 5.8e-112 407.5 201 100.0
Migut.A00698 Erythranthe guttata HOM05D000265 ORTHO05D000161 3.8e-71 271.9 178 82.0
Dinv37571 Davidia involucrata HOM05D000265 ORTHO05D000161 1.1e-41 174.1 198 54.0
Hma1.2p1_0216F.1_g091260 Hydrangea macrophylla HOM05D000265 ORTHO05D000161 2.3e-39 166.4 195 55.9
vmacro11417 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 1.2e-37 160.6 198 53.0
SalBow1G1830 Salvia bowleyana HOM05D000265 ORTHO05D000161 6.2e-37 158.3 185 53.0
SalBow1G5392 Salvia bowleyana HOM05D000265 ORTHO05D000161 6.2e-37 158.3 185 53.0
TWI15G0850 Tripterygium wilfordii HOM05D000265 ORTHO05D000161 6.8e-36 154.8 200 50.5
Ciclev10019573m.g Citrus clementina HOM05D000265 ORTHO05D000161 8.9e-36 154.5 199 49.2
COL.COLO4_08335 Corchorus olitorius HOM05D000265 ORTHO05D000161 2.0e-35 153.3 189 50.8
Oeu063041.1 Olea europaea HOM05D000265 ORTHO05D000161 2.6e-35 152.9 192 52.1
TAR374G1185 Trochodendron aralioides HOM05D000265 ORTHO05D000161 4.4e-35 152.1 194 50.5
Duzib205G2037 Durio zibethinus HOM05D000265 ORTHO05D000161 9.9e-35 151.0 201 48.8
Lj8A215T38 Lonicera japonica HOM05D000265 ORTHO05D000161 9.9e-35 151.0 197 50.3
CSS0039766 Camellia sinensis var. sinensis HOM05D000265 ORTHO05D000161 1.3e-34 150.6 192 50.5
Thecc.03G289100 Theobroma cacao HOM05D000265 ORTHO05D000161 1.3e-34 150.6 198 52.0
Duzib084G1058 Durio zibethinus HOM05D000265 ORTHO05D000161 4.9e-34 148.7 196 49.0
Haze_08719 Corylus avellana HOM05D000265 ORTHO05D000161 1.1e-33 147.5 187 49.2
CiPaw.11G127000 Carya illinoinensis HOM05D000265 ORTHO05D000161 1.9e-33 146.7 198 48.5
Sabra01G0072600 Salix brachista HOM05D000265 ORTHO05D000161 1.9e-33 146.7 195 48.2
Potri.001G097300 Populus trichocarpa HOM05D000265 ORTHO05D000161 4.1e-33 145.6 198 47.5
Potri.003G134100 Populus trichocarpa HOM05D000265 ORTHO05D000161 9.2e-33 144.4 200 48.0
Cpa.g.sc321.1 Carica papaya HOM05D000265 ORTHO05D000161 2.7e-32 142.9 199 46.2
Dinv38886 Davidia involucrata HOM05D000265 ORTHO05D000161 2.7e-32 142.9 205 46.8
Sabra03G0096500 Salix brachista HOM05D000265 ORTHO05D000161 2.7e-32 142.9 180 49.4
PSO170G4828 Papaver somniferum HOM05D000265 ORTHO05D000161 6.0e-32 141.7 204 46.1
CiPaw.12G087200 Carya illinoinensis HOM05D000265 ORTHO05D000161 1.0e-31 141.0 191 49.2
GSVIVG01019447001 Vitis vinifera HOM05D000265 ORTHO05D000161 1.0e-31 141.0 179 49.2
TAR636G2745 Trochodendron aralioides HOM05D000265 ORTHO05D000161 1.3e-31 140.6 188 50.0
QL02p032553 Quercus lobata HOM05D000265 ORTHO05D000161 2.3e-31 139.8 199 48.7
Eucgr.D01793 Eucalyptus grandis HOM05D000265 ORTHO05D000161 3.0e-31 139.4 178 50.6
MBI07_g06318_MAGBIO Magnolia biondii HOM05D000265 ORTHO05D000161 3.0e-31 139.4 192 48.4
RcHm_v2.0_Chr7g0196101 Rosa chinensis HOM05D000265 ORTHO05D000161 3.0e-31 139.4 192 47.4
FAN18G1792 Fragaria x ananassa HOM05D000265 ORTHO05D000161 5.1e-31 138.7 194 49.0
Aqoxy7G00184 Aquilegia oxysepala HOM05D000265 ORTHO05D000161 8.6e-31 137.9 193 48.2
Prupe.5G110600 Prunus persica HOM05D000265 ORTHO05D000161 8.6e-31 137.9 207 45.4
FvH4_5g03620 Fragaria vesca HOM05D000265 ORTHO05D000161 1.1e-30 137.5 192 47.9
Manes.01G050800 Manihot esculenta HOM05D000265 ORTHO05D000161 1.1e-30 137.5 201 47.8
Cc08_g15510 Coffea canephora HOM05D000265 ORTHO05D000161 2.5e-30 136.3 175 48.6
TAR375G0891 Trochodendron aralioides HOM05D000265 ORTHO05D000161 2.5e-30 136.3 198 47.5
Nn7g37332 Nelumbo nucifera HOM05D000265 ORTHO05D000161 5.6e-30 135.2 195 46.7
Actinidia04224 Actinidia chinensis HOM05D000265 ORTHO05D000161 9.5e-30 134.4 166 51.2
FAN04G1075 Fragaria x ananassa HOM05D000265 ORTHO05D000161 9.5e-30 134.4 192 46.4
Nn1g01752 Nelumbo nucifera HOM05D000265 ORTHO05D000161 9.5e-30 134.4 206 45.6
DCAR_027749 Daucus carota HOM05D000265 ORTHO05D000161 2.1e-29 133.3 198 44.4
PSO063G2180 Papaver somniferum HOM05D000265 ORTHO05D000161 2.8e-29 132.9 204 44.6
Rhsim02G0237100 Rhododendron simsii HOM05D000265 ORTHO05D000161 4.7e-29 132.1 197 47.7
CANSAT21G1046 Cannabis sativa HOM05D000265 ORTHO05D000161 1.1e-28 131.0 205 45.4
MD14G1116200 Malus domestica HOM05D000265 ORTHO05D000161 1.4e-28 130.6 199 45.7
DCAR_008525 Daucus carota HOM05D000265 ORTHO05D000161 1.8e-28 130.2 199 44.2
PGR031G2909 Punica granatum HOM05D000265 ORTHO05D000161 1.8e-28 130.2 175 46.9
Gorai.004G136700 Gossypium raimondii HOM05D000265 ORTHO05D000161 3.4e-27 125.9 187 43.9
ATR0109G004 Amborella trichopoda HOM05D000265 ORTHO05D000161 1.3e-26 124.0 182 45.6
MD06G1096000 Malus domestica HOM05D000265 ORTHO05D000161 1.3e-26 124.0 198 44.9
Sed0010696 Sechium edule HOM05D000265 ORTHO05D000161 1.7e-26 123.6 185 42.2
Os01g0221600 Oryza sativa ssp. japonica HOM05D000265 ORTHO05D000161 1.1e-25 120.9 178 41.6
Oeu059582.1 Olea europaea HOM05D000265 ORTHO05D000161 1.4e-25 120.6 225 41.8
CsaV3_5G002280 Cucumis sativus L. HOM05D000265 ORTHO05D000161 4.6e-24 115.5 181 40.9
FAN08G2953 Fragaria x ananassa HOM05D000265 ORTHO05D000161 4.6e-24 115.5 181 44.2
Gohir.A08G103400 Gossypium hirsutum HOM05D000265 ORTHO05D000161 6.0e-24 115.2 191 42.4
FAN04G1335 Fragaria x ananassa HOM05D000265 ORTHO05D000161 7.8e-24 114.8 181 44.2
FAN13G0048 Fragaria x ananassa HOM05D000265 ORTHO05D000161 7.8e-24 114.8 181 44.2
FAN13G1676 Fragaria x ananassa HOM05D000265 ORTHO05D000161 1.7e-23 113.6 180 43.3
MBI06_g29322_MAGBIO Magnolia biondii HOM05D000265 ORTHO05D000161 6.6e-23 111.7 174 41.4
MELO3C005726.2 Cucumis melo HOM05D000265 ORTHO05D000161 1.5e-22 110.5 181 39.8
LjContig00312_ERROPOS870357g0025681 Lotus japonicus HOM05D000265 ORTHO05D000161 2.5e-22 109.8 182 39.6
Gohir.D08G133600 Gossypium hirsutum HOM05D000265 ORTHO05D000161 4.3e-22 109.0 157 43.3
Manes.02G015000 Manihot esculenta HOM05D000265 ORTHO05D000161 8.1e-21 104.8 199 40.2
Glyma.01G223300 Glycine max HOM05D000265 ORTHO05D000161 3.4e-19 99.4 172 37.2
ClCG01G002160 Citrullus lanatus HOM05D000265 ORTHO05D000161 3.2e-17 92.8 168 38.7
Gorai.003G083800 Gossypium raimondii HOM05D000265 ORTHO05D000161 3.9e-15 85.9 175 36.6
Gohir.D03G080150 Gossypium hirsutum HOM05D000265 ORTHO05D000161 1.1e-14 84.3 175 36.6
Phvul.002G161300 Phaseolus vulgaris HOM05D000265 ORTHO05D000161 1.1e-14 84.3 175 33.1
Ah.12g052120 Amaranthus hybridus HOM05D000265 ORTHO05D000161 1.6e-13 80.5 185 35.1
VMungo1215G1642 Vigna mungo HOM05D000265 ORTHO05D000161 2.8e-13 79.7 177 33.3
SEGI_27762 Sequoiadendron giganteum HOM05D000265 ORTHO05D000161 2.4e-12 76.6 177 35.6
Lsat_1_v5_gn_6_10001 Lactuca sativa HOM05D000265 ORTHO05D000161 5.3e-12 75.5 51 68.6
HanXRQChr02g0046351 Helianthus annuus HOM05D000265 ORTHO05D000161 6.9e-12 75.1 55 63.6
Oeu008842.1 Olea europaea HOM05D000265 ORTHO05D022744 2.0e-11 73.6 106 48.1
arahy.Tifrunner.gnm1.ann1.3LM9N0 Arachis hypogaea HOM05D000265 ORTHO05D000161 1.1e-09 67.8 57 57.9
arahy.Tifrunner.gnm1.ann1.5ZY4RD Arachis hypogaea HOM05D000265 ORTHO05D000161 1.4e-09 67.4 51 62.7
ECA233G2398 Erigeron canadensis HOM05D000265 ORTHO05D000161 3.2e-09 66.2 56 55.4
PSO339G4302 Papaver somniferum HOM05D000265 ORTHO05D000161 4.2e-09 65.9 63 50.8
FAN08G0335 Fragaria x ananassa HOM05D000265 ORTHO05D022744 9.3e-09 64.7 54 64.8
HPP92_005249 Vanilla planifolia HOM05D000050 ORTHO05D000771 2.3e-07 60.1 58 56.9
MBI07_g38648_MAGBIO Magnolia biondii HOM05D000265 ORTHO05D000161 2.5e-06 56.6 44 59.1
Phvul.002G082700 Phaseolus vulgaris HOM05D000265 ORTHO05D000161 3.3e-06 56.2 193 28.0
ECA232G2601 Erigeron canadensis HOM05D000265 ORTHO05D000161 4.3e-06 55.8 222 26.6
Phvul.002G082600 Phaseolus vulgaris HOM05D000265 ORTHO05D000161 5.6e-06 55.5 193 27.5
Cc04_g07240 Coffea canephora HOM05D000265 ORTHO05D000161 7.4e-06 55.1 48 54.2
Gohir.D12G171800 Gossypium hirsutum HOM05D000265 ORTHO05D000161 7.4e-06 55.1 181 29.8
Gorai.008G184300 Gossypium raimondii HOM05D000265 ORTHO05D000161 7.4e-06 55.1 181 29.8
Lalb_Chr22g0353001 Lupinus albus HOM05D000265 ORTHO05D000161 7.4e-06 55.1 195 27.7
TPR.G35236 Trifolium pratense HOM05D000265 ORTHO05D000161 9.6e-06 54.7 48 50.0


User provided reference genes

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