Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00162 Erythranthe guttata HOM05D007676 ORTHO05D009456 2.5e-68 261.9 127 100.0
SalBow7G3232 Salvia bowleyana HOM05D007676 ORTHO05D009456 3.8e-32 141.7 121 57.0
SalBow7G3503 Salvia bowleyana HOM05D007676 ORTHO05D009456 3.8e-32 141.7 121 57.0
FvH4_4g18380 Fragaria vesca HOM05D007676 ORTHO05D009456 1.1e-15 87.0 93 46.2
RcHm_v2.0_Chr2g0127591 Rosa chinensis HOM05D007676 ORTHO05D009456 1.4e-15 86.7 125 39.2
Peaxi162Scf00008g00063 Petunia axillaris HOM05D007676 ORTHO05D009456 3.2e-15 85.5 117 41.0
FAN12G2565 Fragaria x ananassa HOM05D007676 ORTHO05D009456 9.4e-15 84.0 91 46.2
SGA_v2.0_scaffold70G23506 Striga asiatica HOM05D000223 ORTHO05D000736 2.1e-14 82.8 79 48.1
Ciclev10018195m.g Citrus clementina HOM05D007676 ORTHO05D009456 2.7e-14 82.4 102 39.2
Solyc10g008205.2 Solanum lycopersicum HOM05D007676 ORTHO05D009456 2.7e-14 82.4 95 40.0
Potri.007G138400 Populus trichocarpa HOM05D007676 ORTHO05D009456 3.6e-14 82.0 117 41.0
Atru.chr6.2889 Acer truncatum HOM05D007676 ORTHO05D009456 4.6e-14 81.6 91 42.9
Atru.chr6.2952 Acer truncatum HOM05D007676 ORTHO05D009456 4.6e-14 81.6 91 42.9
Ciclev10017923m.g Citrus clementina HOM05D007676 ORTHO05D009456 7.9e-14 80.9 121 38.0
CAN.G209.28 Capsicum annuum HOM05D007676 ORTHO05D009456 1.4e-13 80.1 117 37.6
Peaxi162Scf00059g00109 Petunia axillaris HOM05D007676 ORTHO05D009456 1.4e-13 80.1 123 36.6
FvH4_6g26560 Fragaria vesca HOM05D007676 ORTHO05D009456 1.8e-13 79.7 93 44.1
Sp2g09080 Schrenkiella parvula HOM05D007676 ORTHO05D009456 2.3e-13 79.3 92 43.5
RcHm_v2.0_Chr2g0127571 Rosa chinensis HOM05D007676 ORTHO05D009456 3.0e-13 79.0 93 41.9
Eucgr.A01837 Eucalyptus grandis HOM05D007676 ORTHO05D009456 3.9e-13 78.6 94 42.6
MD06G1108000 Malus domestica HOM05D007676 ORTHO05D009456 5.1e-13 78.2 90 45.6
Prupe.2G079300 Prunus persica HOM05D007676 ORTHO05D009456 5.1e-13 78.2 92 44.6
Sabra07G0111500 Salix brachista HOM05D007676 ORTHO05D009456 5.1e-13 78.2 114 39.5
Sp7g26360 Schrenkiella parvula HOM05D007676 ORTHO05D009456 5.1e-13 78.2 130 38.5
Carub.0007s1233 Capsella rubella HOM05D007676 ORTHO05D009456 8.8e-13 77.4 128 39.8
FAN05G5516 Fragaria x ananassa HOM05D007676 ORTHO05D009456 8.8e-13 77.4 93 43.0
TWI23G0504 Tripterygium wilfordii HOM05D007676 ORTHO05D009456 8.8e-13 77.4 116 42.2
AT4G28395 Arabidopsis thaliana HOM05D007676 ORTHO05D009456 1.5e-12 76.6 128 39.8
Thhalv10003292m.g Eutrema salsugineum HOM05D007676 ORTHO05D009456 1.5e-12 76.6 93 40.9
BolC7t46093H Brassica oleracea HOM05D007676 ORTHO05D009456 2.5e-12 75.9 127 36.2
Manes.13G144000 Manihot esculenta HOM05D007676 ORTHO05D009456 2.5e-12 75.9 98 37.8
Phvul.005G103800 Phaseolus vulgaris HOM05D007676 ORTHO05D009456 4.3e-12 75.1 94 42.6
Thhalv10026526m.g Eutrema salsugineum HOM05D007676 ORTHO05D009456 5.7e-12 74.7 127 37.8
Prupe.3G134200 Prunus persica HOM05D007676 ORTHO05D009456 5.7e-12 74.7 95 38.9
Aa31LG5G2990 Aethionema arabicum HOM05D007676 ORTHO05D009456 7.4e-12 74.3 94 40.4
AL7G24190 Arabidopsis lyrata HOM05D007676 ORTHO05D009456 7.4e-12 74.3 113 39.8
C07p56160 Brassica napus HOM05D000223 ORTHO05D000736 1.3e-11 73.6 127 35.4
A03p58040 Brassica napus HOM05D000223 ORTHO05D000736 2.2e-11 72.8 127 35.4
BraA03t14868Z Brassica rapa HOM05D007676 ORTHO05D009456 2.2e-11 72.8 127 35.4
Carub.0008s0425 Capsella rubella HOM05D007676 ORTHO05D009456 2.2e-11 72.8 91 39.6
BcaC03g16646 Brassica carinata HOM05D007676 ORTHO05D009456 2.8e-11 72.4 92 40.2
A02p28290 Brassica napus HOM05D007676 ORTHO05D009456 2.8e-11 72.4 92 40.2
C02p44830 Brassica napus HOM05D007676 ORTHO05D009456 2.8e-11 72.4 92 40.2
BolC2t10523H Brassica oleracea HOM05D007676 ORTHO05D009456 2.8e-11 72.4 92 40.2
BraA02t07864Z Brassica rapa HOM05D007676 ORTHO05D009456 2.8e-11 72.4 92 40.2
CARHR178940 Cardamine hirsuta HOM05D007676 ORTHO05D009456 2.8e-11 72.4 93 38.7
PGSC0003DMG400032819 Solanum tuberosum HOM05D007676 ORTHO05D009456 2.8e-11 72.4 93 38.7
Peaxi162Scf01415g00031 Petunia axillaris HOM05D016571 ORTHO05D020909 3.7e-11 72.0 94 39.4
AL8G15740 Arabidopsis lyrata HOM05D007676 ORTHO05D009456 4.8e-11 71.6 93 37.6
AT5G44265 Arabidopsis thaliana HOM05D007676 ORTHO05D009456 4.8e-11 71.6 93 37.6
CARHR236150 Cardamine hirsuta HOM05D007676 ORTHO05D009456 4.8e-11 71.6 101 42.6
Potri.017G013200 Populus trichocarpa HOM05D007676 ORTHO05D009456 4.8e-11 71.6 94 43.6
Carub.0007s1234 Capsella rubella HOM05D007676 ORTHO05D009456 6.3e-11 71.2 132 35.6
Manes.12G089100 Manihot esculenta HOM05D007676 ORTHO05D009456 6.3e-11 71.2 124 33.9
Potri.002G012300 Populus trichocarpa HOM05D007676 ORTHO05D009456 8.2e-11 70.9 114 36.0
Potri.007G138500 Populus trichocarpa HOM05D007676 ORTHO05D009456 8.2e-11 70.9 95 44.2
CARHR236140 Cardamine hirsuta HOM05D007676 ORTHO05D009456 1.1e-10 70.5 99 41.4
Aa31LG7G7230 Aethionema arabicum HOM05D007676 ORTHO05D009456 1.4e-10 70.1 127 35.4
Glyma.12G204200 Glycine max HOM05D007676 ORTHO05D009456 1.4e-10 70.1 94 38.3
THA.LOC104804054 Tarenaya hassleriana HOM05D007676 ORTHO05D009456 1.4e-10 70.1 96 39.6
Peaxi162Scf00050g00313 Petunia axillaris HOM05D007676 ORTHO05D009456 1.8e-10 69.7 86 41.9
Thecc.02G183500 Theobroma cacao HOM05D007676 ORTHO05D009456 1.8e-10 69.7 96 39.6
Sabra07G0111600 Salix brachista HOM05D007676 ORTHO05D009456 2.4e-10 69.3 91 46.2
Sabra02G0009600 Salix brachista HOM05D007676 ORTHO05D009456 3.1e-10 68.9 115 35.7
Aa31LG7G7240 Aethionema arabicum HOM05D007676 ORTHO05D009456 4.1e-10 68.6 126 34.1
MD17G1235700 Malus domestica HOM05D007676 ORTHO05D009456 4.1e-10 68.6 92 39.1
VMungo1080G1717 Vigna mungo HOM05D007676 ORTHO05D009456 4.1e-10 68.6 92 40.2
TPR.G6389 Trifolium pratense HOM05D007676 ORTHO05D009456 6.9e-10 67.8 97 40.2
THA.LOC104801166 Tarenaya hassleriana HOM05D007676 ORTHO05D009456 1.5e-09 66.6 93 34.4
Lalb_Chr14g0366911 Lupinus albus HOM05D007676 ORTHO05D009456 5.9e-09 64.7 124 36.3
MD06G1108100 Malus domestica HOM05D007676 ORTHO05D009456 5.9e-09 64.7 90 35.6
Lalb_Chr14g0367061 Lupinus albus HOM05D007676 ORTHO05D009456 7.7e-09 64.3 122 34.4
FAN23G2239 Fragaria x ananassa HOM05D007676 ORTHO05D009456 1.0e-08 63.9 74 40.5
PGR042G0101 Punica granatum HOM05D007676 ORTHO05D009456 1.3e-08 63.5 119 35.3
Eucgr.A01836 Eucalyptus grandis HOM05D007676 ORTHO05D009456 3.8e-08 62.0 124 34.7
arahy.Tifrunner.gnm1.ann1.SH5L4P Arachis hypogaea HOM05D029628 ORTHO05D009456 5.0e-08 61.6 120 31.7
Lj3g0021089 Lotus japonicus HOM05D007676 ORTHO05D009456 5.0e-08 61.6 125 32.0
MD14G1128300 Malus domestica HOM05D007676 ORTHO05D009456 6.5e-08 61.2 91 39.6
FvH4_4g18390 Fragaria vesca HOM05D007676 ORTHO05D009456 8.5e-08 60.8 121 35.5
FAN07G1701 Fragaria x ananassa HOM05D007676 ORTHO05D009456 8.5e-08 60.8 121 35.5
FAN12G3844 Fragaria x ananassa HOM05D007676 ORTHO05D009456 8.5e-08 60.8 121 35.5
Lalb_Chr14g0366961 Lupinus albus HOM05D007676 ORTHO05D009456 8.5e-08 60.8 95 34.7
FAN12G3363 Fragaria x ananassa HOM05D007676 ORTHO05D009456 1.4e-07 60.1 121 35.5
Lalb_Chr00c25g0407471 Lupinus albus HOM05D007676 ORTHO05D009456 1.9e-07 59.7 92 34.8
arahy.Tifrunner.gnm1.ann1.0QPA7A Arachis hypogaea HOM05D029628 ORTHO05D009456 3.2e-07 58.9 120 30.8
arahy.Tifrunner.gnm1.ann1.W0QD2B Arachis hypogaea HOM05D029628 ORTHO05D009456 3.2e-07 58.9 120 30.8
Lalb_Chr00c08g0404761 Lupinus albus HOM05D007676 ORTHO05D009456 5.5e-07 58.2 95 32.6
Aa31LG2G22250 Aethionema arabicum HOM05D007676 ORTHO05D009456 2.7e-06 55.8 95 37.9
QL04p080567 Quercus lobata HOM05D007676 ORTHO05D009456 2.7e-06 55.8 127 30.7
Psat0s13238g0040 Pisum sativum HOM05D000275 ORTHO05D003378 7.9e-06 54.3 121 29.8


User provided reference genes

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