Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00062 Erythranthe guttata HOM05D007471 ORTHO05D009481 2.1e-132 475.7 242 100.0
MSTRG.6626 Avicennia marina HOM05D007471 ORTHO05D009481 7.8e-95 350.9 242 76.0
SalBow7G1274 Salvia bowleyana HOM05D007471 ORTHO05D009481 8.6e-94 347.4 242 72.3
Dinv05327 Davidia involucrata HOM05D007471 ORTHO05D009481 1.4e-64 250.4 243 53.9
Actinidia12353 Actinidia chinensis HOM05D007471 ORTHO05D009481 4.2e-64 248.8 242 50.4
Cpa.g.sc136.59 Carica papaya HOM05D007471 ORTHO05D009481 1.6e-63 246.9 242 53.7
Oeu000672.1 Olea europaea HOM05D007471 ORTHO05D009481 7.9e-63 244.6 200 62.0
Nitab4.5_0003086g0070 Nicotiana tabacum HOM05D007471 ORTHO05D009481 3.0e-62 242.7 242 53.3
CSS0003771 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 8.7e-62 241.1 243 50.2
QL04p066931 Quercus lobata HOM05D007471 ORTHO05D009481 1.5e-61 240.4 242 50.0
Lj8A138T38 Lonicera japonica HOM05D007471 ORTHO05D009481 2.5e-61 239.6 243 52.3
TAR626G0037 Trochodendron aralioides HOM05D007471 ORTHO05D009481 5.7e-61 238.4 243 50.6
Rhsim06G0179200 Rhododendron simsii HOM05D000358 ORTHO05D001562 3.7e-60 235.7 242 50.0
Solyc07g045150.3 Solanum lycopersicum HOM05D007471 ORTHO05D009481 1.1e-59 234.2 242 51.7
Sopen07g023700 Solanum pennellii HOM05D007471 ORTHO05D009481 3.1e-59 232.6 242 52.1
PGSC0003DMG402017414 Solanum tuberosum HOM05D007471 ORTHO05D009481 9.0e-59 231.1 242 51.2
Hma1.2p1_0599F.1_g186930 Hydrangea macrophylla HOM05D007471 ORTHO05D009481 3.4e-58 229.2 243 48.1
RcHm_v2.0_Chr2g0155251 Rosa chinensis HOM05D007471 ORTHO05D009481 3.4e-58 229.2 243 49.8
Psat1g019920 Pisum sativum HOM05D007471 ORTHO05D009481 7.6e-58 228.0 244 47.5
MD17G1121200 Malus domestica HOM05D007471 ORTHO05D009481 1.0e-57 227.6 243 48.6
Ciclev10016450m.g Citrus clementina HOM05D007471 ORTHO05D009481 1.3e-57 227.3 244 48.8
FvH4_6g40230 Fragaria vesca HOM05D007471 ORTHO05D009481 3.8e-57 225.7 243 48.6
Peaxi162Scf00359g00320 Petunia axillaris HOM05D007471 ORTHO05D009481 5.0e-57 225.3 242 50.0
FAN14G4986 Fragaria x ananassa HOM05D007471 ORTHO05D009481 8.4e-57 224.6 243 48.6
MD17G1122600 Malus domestica HOM05D007471 ORTHO05D009481 1.1e-56 224.2 243 47.7
Manes.12G067200 Manihot esculenta HOM05D007471 ORTHO05D009481 1.1e-56 224.2 243 46.5
HanXRQChr09g0257421 Helianthus annuus HOM05D007471 ORTHO05D009481 1.9e-56 223.4 244 49.6
Lj6g0025127 Lotus japonicus HOM05D007471 ORTHO05D009481 1.9e-56 223.4 244 47.5
SGA_v2.0_scaffold73G24486 Striga asiatica HOM05D007471 ORTHO05D009481 1.9e-56 223.4 278 49.3
MELO3C024177.2 Cucumis melo HOM05D007471 ORTHO05D009481 5.5e-56 221.9 247 46.6
Sed0023252 Sechium edule HOM05D007471 ORTHO05D009481 5.5e-56 221.9 244 47.5
FAN09G1454 Fragaria x ananassa HOM05D007471 ORTHO05D009481 9.3e-56 221.1 243 49.0
CARHR082340 Cardamine hirsuta HOM05D007471 ORTHO05D009481 1.2e-55 220.7 243 46.9
Cc05_g01930 Coffea canephora HOM05D007471 ORTHO05D009481 1.6e-55 220.3 245 48.6
CAN.G826.3 Capsicum annuum HOM05D007471 ORTHO05D009481 1.3e-54 217.2 243 50.2
FAN05G3962 Fragaria x ananassa HOM05D007471 ORTHO05D009481 2.3e-54 216.5 243 47.3
Lalb_Chr10g0094201 Lupinus albus HOM05D007471 ORTHO05D009481 2.3e-54 216.5 243 47.3
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 6.7e-54 214.9 219 49.8
Eucgr.K01386 Eucalyptus grandis HOM05D007471 ORTHO05D009481 6.7e-54 214.9 244 45.9
CsaV3_7G002330 Cucumis sativus L. HOM05D007471 ORTHO05D009481 8.7e-54 214.5 247 44.5
AL3G19000 Arabidopsis lyrata HOM05D007471 ORTHO05D009481 2.5e-53 213.0 243 43.2
BcaB03g14688 Brassica carinata HOM05D007471 ORTHO05D009481 2.5e-53 213.0 243 44.9
Lsat_1_v5_gn_9_102921 Lactuca sativa HOM05D007471 ORTHO05D009481 3.3e-53 212.6 244 50.0
GSVIVG01030129001 Vitis vinifera HOM05D007471 ORTHO05D009481 3.3e-53 212.6 243 47.3
PGR044G0015 Punica granatum HOM05D007471 ORTHO05D009481 9.7e-53 211.1 242 45.0
Glyma.09G086000 Glycine max HOM05D007471 ORTHO05D009481 3.7e-52 209.1 243 44.0
Nn1g07565 Nelumbo nucifera HOM05D007471 ORTHO05D009481 4.8e-52 208.8 243 45.7
Sp3g06580 Schrenkiella parvula HOM05D007471 ORTHO05D009481 4.8e-52 208.8 243 44.4
THA.LOC104819026 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 1.1e-51 207.6 245 44.9
Haze_12583 Corylus avellana HOM05D007471 ORTHO05D009481 9.0e-51 204.5 242 45.9
BolC3t16568H Brassica oleracea HOM05D007471 ORTHO05D009481 1.2e-50 204.1 243 44.4
Thhalv10021420m.g Eutrema salsugineum HOM05D007471 ORTHO05D009481 1.2e-50 204.1 243 44.4
Medtr2g049140 Medicago truncatula HOM05D007471 ORTHO05D009481 1.2e-50 204.1 243 43.6
Glyma.15G195100 Glycine max HOM05D007471 ORTHO05D009481 1.5e-50 203.8 243 43.6
A03p35390 Brassica napus HOM05D007471 ORTHO05D009481 2.0e-50 203.4 243 42.8
BraA03t12717Z Brassica rapa HOM05D007471 ORTHO05D009481 2.0e-50 203.4 243 42.8
BcaC01g04271 Brassica carinata HOM05D007471 ORTHO05D009481 2.6e-50 203.0 243 44.4
C03p43000 Brassica napus HOM05D007471 ORTHO05D009481 2.6e-50 203.0 243 44.4
Sc21g0000400 Simmondsia chinensis HOM05D007471 ORTHO05D009481 3.4e-50 202.6 245 45.7
TWI36G0936 Tripterygium wilfordii HOM05D007471 ORTHO05D009481 4.5e-50 202.2 242 42.6
AT3G07640 Arabidopsis thaliana HOM05D007471 ORTHO05D009481 7.7e-50 201.4 243 43.2
ECA240G3131 Erigeron canadensis HOM05D001349 ORTHO05D001980 5.0e-49 198.7 243 49.4
Carub.0003s0722 Capsella rubella HOM05D007471 ORTHO05D009481 1.1e-48 197.6 245 42.9
vmacro12060 Vaccinium macrocarpon HOM05D007471 ORTHO05D009481 1.4e-48 197.2 201 49.8
VMungo1309G3041 Vigna mungo HOM05D007471 ORTHO05D009481 1.9e-48 196.8 243 44.4
Phvul.009G214800 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 2.5e-48 196.4 243 44.0
PSO210G0038 Papaver somniferum HOM05D007471 ORTHO05D009481 1.2e-47 194.1 243 42.8
MBI14_g27042_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 1.0e-46 191.0 229 45.0
PSO210G4841 Papaver somniferum HOM05D007471 ORTHO05D009481 3.0e-46 189.5 245 42.0
ClCG02G003070 Citrullus lanatus HOM05D007471 ORTHO05D009481 3.9e-46 189.1 292 38.0
DCAR_019662 Daucus carota HOM05D007471 ORTHO05D009481 1.5e-45 187.2 205 48.8
ATR0751G158 Amborella trichopoda HOM05D007471 ORTHO05D009481 2.0e-45 186.8 243 43.2
Aa31LG5G18220 Aethionema arabicum HOM05D007471 ORTHO05D009481 2.5e-45 186.4 266 40.6
Atru.BG.43.p Acer truncatum HOM05D007471 ORTHO05D009481 3.1e-43 179.5 184 48.4
AUR62018237 Chenopodium quinoa HOM05D007471 ORTHO05D009481 6.9e-43 178.3 243 42.0
AUR62037766 Chenopodium quinoa HOM05D007471 ORTHO05D009481 9.1e-43 177.9 244 42.2
Prupe.3G192700 Prunus persica HOM05D007471 ORTHO05D009481 1.1e-40 171.0 174 51.1
THA.LOC104822442 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 1.1e-40 171.0 246 39.4
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 9.4e-40 167.9 238 41.2
Phvul.009G215100 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 2.7e-39 166.4 243 39.9
CSS0004770 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 1.5e-37 160.6 168 48.2
TPR.G20279 Trifolium pratense HOM05D007471 ORTHO05D009481 4.4e-37 159.1 175 46.9
Os02g0582400 Oryza sativa ssp. japonica HOM05D007471 ORTHO05D009481 9.1e-35 151.4 243 35.4
BcaB03g14686 Brassica carinata HOM05D007471 ORTHO05D009481 2.2e-33 146.7 184 43.5
Zm00001eb245410 Zea mays HOM05D007471 ORTHO05D009481 2.2e-33 146.7 242 35.5
FAN02G2672 Fragaria x ananassa HOM05D007471 ORTHO05D009481 1.5e-32 144.1 243 35.4
TPR.G28406 Trifolium pratense HOM05D007471 ORTHO05D009481 1.5e-32 144.1 205 40.0
Duzib133G1025 Durio zibethinus HOM05D007471 ORTHO05D009481 5.5e-32 142.1 250 36.8
CDE11G0370 Ceratophyllum demersum HOM05D007471 ORTHO05D009481 1.6e-31 140.6 251 35.9
SHI10184 Sapria himalayana HOM05D007471 ORTHO05D009481 1.8e-30 137.1 156 42.9
Gohir.D07G199700 Gossypium hirsutum HOM05D007471 ORTHO05D009481 8.8e-30 134.8 250 34.8
Gohir.A07G193500 Gossypium hirsutum HOM05D007471 ORTHO05D009481 1.5e-29 134.0 250 33.6
Thecc.01G199800 Theobroma cacao HOM05D007471 ORTHO05D009481 3.3e-29 132.9 251 35.1
Gorai.001G223900 Gossypium raimondii HOM05D007471 ORTHO05D009481 1.3e-28 131.0 250 34.4
COL.COLO4_19658 Corchorus olitorius HOM05D007471 ORTHO05D009481 2.2e-28 130.2 175 41.1
SEGI_00651 Sequoiadendron giganteum HOM05D007471 ORTHO05D009481 8.2e-28 128.3 247 32.4
MBI14_g39587_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 4.0e-22 109.4 237 32.5
Peaxi162Scf00289g00310 Petunia axillaris HOM05D007471 ORTHO05D009481 6.1e-15 85.5 95 49.5
Lsat_1_v5_gn_3_93600 Lactuca sativa HOM05D007471 ORTHO05D233800 3.5e-10 69.7 98 45.9
ClCG02G003080 Citrullus lanatus HOM05D007471 ORTHO05D009481 1.0e-09 68.2 72 45.8
FAN05G5088 Fragaria x ananassa HOM05D000100 ORTHO05D000052 1.8e-06 57.4 71 40.8


User provided reference genes

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