Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00034 Erythranthe guttata HOM05D003210 ORTHO05D000001 3.5e-122 443.0 557 100.0
MSTRG.6643 Avicennia marina HOM05D003210 ORTHO05D000001 3.2e-51 207.2 217 78.8
SalBow7G0399 Salvia bowleyana HOM05D003210 ORTHO05D000001 1.3e-44 185.3 227 71.4
SGA_v2.0_scaffold181G39678 Striga asiatica HOM05D003210 ORTHO05D000001 7.7e-37 159.5 210 68.1
Dinv24763 Davidia involucrata HOM05D003210 ORTHO05D000001 8.8e-33 146.0 214 65.9
CSS0039883 Camellia sinensis var. sinensis HOM05D003210 ORTHO05D000001 1.4e-30 138.7 212 57.5
CSS0019582 Camellia sinensis var. sinensis HOM05D003210 ORTHO05D000001 5.3e-30 136.7 212 58.5
QL04p021900 Quercus lobata HOM05D003210 ORTHO05D000001 5.3e-30 136.7 214 65.0
Prupe.3G201200 Prunus persica HOM05D003210 ORTHO05D000001 9.1e-30 136.0 194 39.7
CiPaw.12G072400 Carya illinoinensis HOM05D003210 ORTHO05D000001 7.7e-29 132.9 210 62.4
Sed0013166 Sechium edule HOM05D003210 ORTHO05D000001 1.3e-28 132.1 212 61.3
Ciclev10014182m.g Citrus clementina HOM05D003210 ORTHO05D000001 1.7e-28 131.7 205 59.5
ClCG02G002730 Citrullus lanatus HOM05D003210 ORTHO05D000001 6.5e-28 129.8 211 59.2
Rhsim06G0174500 Rhododendron simsii HOM05D003210 ORTHO05D000001 1.5e-27 128.6 216 62.0
MD09G1122300 Malus domestica HOM05D003210 ORTHO05D000001 3.2e-27 127.5 198 68.7
Atru.chr6.3361 Acer truncatum HOM05D003210 ORTHO05D000001 1.2e-26 125.6 208 58.7
Peaxi162Scf00776g00227 Petunia axillaris HOM05D003210 ORTHO05D000001 2.1e-26 124.8 195 69.7
Haze_07989 Corylus avellana HOM05D003210 ORTHO05D000001 3.6e-26 124.0 205 63.4
PGSC0003DMG400006128 Solanum tuberosum HOM05D003210 ORTHO05D000001 1.0e-25 122.5 192 71.4
CsaV3_7G023730 Cucumis sativus L. HOM05D003210 ORTHO05D000001 1.8e-25 121.7 214 58.9
Nitab4.5_0000441g0020 Nicotiana tabacum HOM05D003210 ORTHO05D000001 1.8e-25 121.7 192 70.3
MELO3C024111.2 Cucumis melo HOM05D003210 ORTHO05D000001 4.0e-25 120.6 194 65.5
CsaV3_7G021590 Cucumis sativus L. HOM05D003210 ORTHO05D000001 1.5e-24 118.6 216 55.1
Thecc.01G191200 Theobroma cacao HOM05D003210 ORTHO05D000001 2.6e-24 117.9 212 41.5
Sc06g0009870 Simmondsia chinensis HOM05D003210 ORTHO05D000001 3.3e-24 117.5 217 32.7
Cfa012658 Carpinus fangiana HOM05D003210 ORTHO05D000001 2.8e-23 114.4 205 62.4
MELO3C013188.2 Cucumis melo HOM05D003210 ORTHO05D000001 2.4e-22 111.3 216 54.6
PGR142G4479 Punica granatum HOM05D003210 ORTHO05D000001 2.4e-22 111.3 212 61.3
Sopen07g024250 Solanum pennellii HOM05D003210 ORTHO05D000001 2.4e-22 111.3 192 68.8
FvH4_6g41080 Fragaria vesca HOM05D003210 ORTHO05D000001 7.0e-22 109.8 202 33.7
FAN14G2019 Fragaria x ananassa HOM05D003210 ORTHO05D000001 7.0e-22 109.8 202 33.7
THA.LOC104819041 Tarenaya hassleriana HOM05D003210 ORTHO05D000001 1.2e-21 109.0 210 45.2
TAR629G0622 Trochodendron aralioides HOM05D003210 ORTHO05D000001 1.0e-20 105.9 205 60.0
Cc04_g11530 Coffea canephora HOM05D003210 ORTHO05D000001 2.2e-20 104.8 197 60.4
Solyc07g047820.3 Solanum lycopersicum HOM05D003210 ORTHO05D000001 2.2e-20 104.8 192 67.7
MBI19_g25583_MAGBIO Magnolia biondii HOM05D003210 ORTHO05D000001 2.9e-20 104.4 211 60.2
DCAR_012908 Daucus carota HOM05D003210 ORTHO05D000001 3.8e-20 104.0 203 59.6
DCAR_012925 Daucus carota HOM05D003210 ORTHO05D000001 3.8e-20 104.0 203 59.6
Oeu040467.2 Olea europaea HOM05D003210 ORTHO05D000001 1.5e-19 102.1 219 54.3
FAN02G2842 Fragaria x ananassa HOM05D003210 ORTHO05D000001 3.6e-18 97.4 201 61.7
Dinv24770 Davidia involucrata HOM05D003210 ORTHO05D000001 6.8e-17 93.2 202 42.1
vmacro12101 Vaccinium macrocarpon HOM05D003210 ORTHO05D000001 5.7e-16 90.1 212 54.2
Dinv33235 Davidia involucrata HOM05D003210 ORTHO05D000001 7.5e-16 89.7 205 57.6
Ah.15g091280 Amaranthus hybridus HOM05D003210 ORTHO05D000001 6.3e-15 86.7 216 50.0
SHI10143 Sapria himalayana HOM05D003210 ORTHO05D000001 6.3e-15 86.7 191 55.0
Manes.12G061200 Manihot esculenta HOM05D003210 ORTHO05D000001 7.0e-14 83.2 208 56.2
HanXRQChr13g0389381 Helianthus annuus HOM05D003210 ORTHO05D000001 1.7e-12 78.6 195 56.4
RcHm_v2.0_Chr2g0156641 Rosa chinensis HOM05D003210 ORTHO05D000001 3.8e-12 77.4 201 57.7
Nitab4.5_0011940g0010 Nicotiana tabacum HOM05D003210 ORTHO05D000001 1.5e-11 75.5 66 53.0
Nn1g03235 Nelumbo nucifera HOM05D003210 ORTHO05D000001 7.2e-11 73.2 194 56.7
CAN.G1397.6 Capsicum annuum HOM05D003210 ORTHO05D000001 1.2e-10 72.4 195 59.5
AUR62039467 Chenopodium quinoa HOM05D003210 ORTHO05D000001 1.6e-10 72.0 170 30.0
AUR62027713 Chenopodium quinoa HOM05D003210 ORTHO05D000001 4.7e-10 70.5 170 30.0
ECA240G1833 Erigeron canadensis HOM05D003210 ORTHO05D000001 8.0e-10 69.7 56 53.6
CAN.G674.2 Capsicum annuum HOM05D003210 ORTHO05D000001 1.4e-09 68.9 178 38.8
Nitab4.5_0002364g0030 Nicotiana tabacum HOM05D003210 ORTHO05D000001 1.4e-09 68.9 178 51.7
PSO675G6229 Papaver somniferum HOM05D003210 ORTHO05D000001 2.3e-09 68.2 213 54.0
SEGI_31076 Sequoiadendron giganteum HOM05D003210 ORTHO05D000001 2.3e-09 68.2 184 60.9
MD15G1441200 Malus domestica HOM05D003210 ORTHO05D000001 4.0e-09 67.4 170 26.5
Nitab4.5_0000574g0030 Nicotiana tabacum HOM05D003210 ORTHO05D000001 4.0e-09 67.4 178 52.2
PSO541G3269 Papaver somniferum HOM05D003210 ORTHO05D000001 4.0e-09 67.4 70 44.3
Sopen10g032390 Solanum pennellii HOM05D003210 ORTHO05D000001 6.8e-09 66.6 178 46.1
PGSC0003DMG401028232 Solanum tuberosum HOM05D003210 ORTHO05D000001 8.8e-09 66.2 178 47.2
Migut.H02282 Erythranthe guttata HOM05D003210 ORTHO05D000001 1.2e-08 65.9 170 51.2
PSO017G1665 Papaver somniferum HOM05D015807 ORTHO05D011376 1.2e-08 65.9 116 33.6
Solyc10g081880.3 Solanum lycopersicum HOM05D003210 ORTHO05D000001 1.5e-08 65.5 178 48.3
MD08G1245900 Malus domestica HOM05D003210 ORTHO05D000001 2.6e-08 64.7 174 25.3
FAN05G1838 Fragaria x ananassa HOM05D003210 ORTHO05D000001 4.4e-08 63.9 62 46.8
Manes.12G124600 Manihot esculenta HOM05D003210 ORTHO05D000001 5.7e-08 63.5 170 52.4
Phvul.008G101600 Phaseolus vulgaris HOM05D003210 ORTHO05D000001 7.5e-08 63.2 170 47.1
TWI18G1117 Tripterygium wilfordii HOM05D003210 ORTHO05D000001 7.5e-08 63.2 193 54.9
Cpa.g.sc10.84 Carica papaya HOM05D003210 ORTHO05D000001 9.8e-08 62.8 170 46.5
Hund21891 Selenicereus undatus HOM05D008994 ORTHO05D010954 3.7e-07 60.8 114 35.1
CDE02G3715 Ceratophyllum demersum HOM05D002444 ORTHO05D009235 4.9e-07 60.5 121 29.8
FAN09G1124 Fragaria x ananassa HOM05D003210 ORTHO05D000001 6.3e-07 60.1 201 55.2
Prupe.1G583300 Prunus persica HOM05D003210 ORTHO05D000001 6.3e-07 60.1 170 38.8
Glyma.09G200200 Glycine max HOM05D003210 ORTHO05D000001 8.3e-07 59.7 167 45.5
Psat3g169880 Pisum sativum HOM05D003210 ORTHO05D000001 8.3e-07 59.7 194 43.8
CSS0000965 Camellia sinensis var. sinensis HOM05D003210 ORTHO05D000001 1.1e-06 59.3 170 50.6
HPP92_023170 Vanilla planifolia HOM05D007128 ORTHO05D009059 1.1e-06 59.3 121 33.1
Hma1.2p1_0133F.1_g061420 Hydrangea macrophylla HOM05D003210 ORTHO05D000001 1.4e-06 58.9 182 56.0
Aqoxy6G00832 Aquilegia oxysepala HOM05D003210 ORTHO05D000001 1.8e-06 58.5 175 24.6
Nitab4.5_0004239g0030 Nicotiana tabacum HOM05D007545 ORTHO05D009579 1.8e-06 58.5 101 36.6
RcHm_v2.0_Chr1g0329241 Rosa chinensis HOM05D003210 ORTHO05D000001 1.8e-06 58.5 170 25.3
TWI53G0425 Tripterygium wilfordii HOM05D003210 ORTHO05D000001 1.8e-06 58.5 180 38.9
CsaV3_3G035530 Cucumis sativus L. HOM05D000855 ORTHO05D008530 2.4e-06 58.2 118 28.0
Gorai.008G093300 Gossypium raimondii HOM05D003210 ORTHO05D000001 2.4e-06 58.2 183 51.4
Cc03_g12590 Coffea canephora HOM05D003210 ORTHO05D000001 3.1e-06 57.8 170 56.5
Aqoxy4G02220 Aquilegia oxysepala HOM05D003210 ORTHO05D000001 4.1e-06 57.4 70 40.0
BcaB05g22690 Brassica carinata HOM05D000162 ORTHO05D000003 4.1e-06 57.4 118 29.7
TWI74G0121 Tripterygium wilfordii HOM05D003210 ORTHO05D000001 4.1e-06 57.4 180 48.3
HPP92_009567 Vanilla planifolia HOM05D003210 ORTHO05D000001 4.1e-06 57.4 200 48.5
CsaV3_6G031450 Cucumis sativus L. HOM05D003210 ORTHO05D000001 5.4e-06 57.0 168 51.8
Lsat_1_v5_gn_9_104601 Lactuca sativa HOM05D003210 ORTHO05D000001 5.4e-06 57.0 44 59.1
arahy.Tifrunner.gnm1.ann1.S1ZEXT Arachis hypogaea HOM05D004182 ORTHO05D007321 7.0e-06 56.6 119 32.8
COL.COLO4_08492 Corchorus olitorius HOM05D003210 ORTHO05D000001 7.0e-06 56.6 69 39.1
Lalb_Chr06g0171381 Lupinus albus HOM05D000855 ORTHO05D008530 7.0e-06 56.6 120 30.0
Nitab4.5_0005257g0020 Nicotiana tabacum HOM05D003210 ORTHO05D000001 7.0e-06 56.6 178 44.4
Peaxi162Scf00370g00062 Petunia axillaris HOM05D003210 ORTHO05D000001 7.0e-06 56.6 180 43.9


User provided reference genes

Program Settings