Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 4.0e-105 384.8 196 100.0
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 3.0e-89 332.0 194 85.6
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 2.2e-87 325.9 196 82.1
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 4.5e-85 318.2 194 78.4
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 2.5e-83 312.4 196 78.6
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 7.3e-83 310.8 196 77.6
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 7.3e-83 310.8 195 77.4
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 2.1e-82 309.3 196 76.5
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 1.4e-81 306.6 196 75.0
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 1.4e-81 306.6 194 75.8
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 1.8e-81 306.2 196 78.6
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 3.0e-81 305.4 196 75.5
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 3.0e-81 305.4 194 76.8
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 2.0e-80 302.8 196 76.5
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 2.6e-80 302.4 195 75.9
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 5.8e-80 301.2 196 74.5
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 2.2e-79 299.3 190 75.3
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.4e-78 296.6 193 75.1
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 1.4e-78 296.6 196 74.0
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 1.9e-78 296.2 193 75.1
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 1.9e-78 296.2 196 74.0
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 4.1e-78 295.0 196 73.0
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 7.0e-78 294.3 192 75.0
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 1.6e-77 293.1 196 73.5
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 2.7e-77 292.4 188 75.0
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 4.6e-77 291.6 196 73.0
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 4.6e-77 291.6 195 73.8
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 4.6e-77 291.6 194 72.7
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 7.8e-77 290.8 191 73.8
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 8.6e-76 287.3 193 74.6
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 1.1e-75 287.0 196 71.9
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 7.3e-75 284.3 196 71.9
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 1.6e-74 283.1 193 70.5
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 3.6e-74 282.0 196 69.9
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 3.6e-74 282.0 184 75.0
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 4.7e-74 281.6 195 70.3
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 1.8e-73 279.6 196 68.9
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 1.8e-73 279.6 193 71.0
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 5.2e-73 278.1 193 71.0
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 6.8e-73 277.7 195 68.7
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 2.0e-72 276.2 180 73.9
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 3.4e-72 275.4 196 69.4
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 5.8e-72 274.6 190 70.5
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 1.3e-71 273.5 193 68.9
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 1.3e-71 273.5 195 67.2
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 2.2e-71 272.7 194 67.5
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 4.9e-71 271.6 193 68.4
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 4.9e-71 271.6 188 70.2
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 6.4e-71 271.2 171 76.0
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 8.3e-71 270.8 195 66.7
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 8.3e-71 270.8 193 68.4
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 1.9e-70 269.6 195 67.2
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 1.2e-69 266.9 195 65.1
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 1.2e-69 266.9 188 70.7
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 1.6e-69 266.5 200 67.0
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 2.1e-69 266.2 193 66.3
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 2.7e-69 265.8 194 65.5
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 7.8e-69 264.2 195 64.6
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 7.8e-69 264.2 195 65.6
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 1.7e-68 263.1 195 66.2
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 2.3e-68 262.7 195 63.6
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 3.9e-68 261.9 168 76.8
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 5.0e-68 261.5 180 70.6
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 3.3e-67 258.8 170 74.7
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 4.3e-67 258.5 193 66.8
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 1.2e-66 256.9 187 67.9
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 2.8e-66 255.8 257 54.9
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 8.1e-66 254.2 186 68.3
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 4.0e-65 251.9 193 67.9
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 4.0e-65 251.9 267 53.6
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 6.8e-65 251.1 196 62.8
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 5.8e-64 248.1 153 77.8
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 1.7e-63 246.5 174 69.0
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 3.7e-63 245.4 150 76.0
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 6.4e-63 244.6 167 75.4
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 2.7e-61 239.2 143 78.3
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 7.8e-61 237.7 176 65.9
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.3e-60 236.9 199 63.8
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 9.5e-59 230.7 196 60.7
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 4.7e-58 228.4 181 64.6
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 2.6e-56 222.6 319 41.7
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 2.6e-56 222.6 319 41.7
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 1.3e-55 220.3 343 40.2
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 1.1e-54 217.2 150 69.3
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 6.2e-50 201.4 193 55.4
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 1.5e-48 196.8 171 53.8
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 2.0e-48 196.4 136 70.6
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 7.6e-48 194.5 136 72.8
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 2.9e-47 192.6 170 57.1
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 1.2e-45 187.2 137 68.6
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 3.6e-42 175.6 186 51.6
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 4.8e-42 175.3 121 71.1
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 4.8e-42 175.3 109 74.3
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 2.0e-40 169.9 214 50.5
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 4.2e-38 162.2 132 59.8
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 7.9e-37 157.9 171 50.3
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 9.0e-33 144.4 280 33.9
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 3.0e-28 129.4 97 69.1
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 2.8e-26 122.9 85 74.1
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 8.2e-26 121.3 81 63.0
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 8.2e-18 94.7 72 66.7
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 1.5e-16 90.5 56 71.4
PRCOL_00004041 Prasinoderma coloniale HOM05D007219 ORTHO05D008995 1.5e-16 90.5 170 36.5
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 7.7e-16 88.2 58 72.4
Thhalv10003074m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 1.3e-15 87.4 112 44.6
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 2.5e-14 83.2 129 38.8
Cre03.g184151 Chlamydomonas reinhardtii HOM05D007219 ORTHO05D008995 6.1e-13 78.6 108 45.4
Oeu027288.1 Olea europaea HOM05D007219 ORTHO05D008995 9.7e-11 71.2 49 69.4
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 2.6e-08 63.2 36 75.0
CSS0021882 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.4e-08 62.8 34 79.4


User provided reference genes

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