Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00011 Erythranthe guttata HOM05D005150 ORTHO05D006070 9.4e-80 300.1 144 100.0
Oeu029950.1 Olea europaea HOM05D005150 ORTHO05D006070 7.1e-19 97.8 111 49.5
Duzib133G1369 Durio zibethinus HOM05D005150 ORTHO05D006070 2.8e-15 85.9 107 47.7
QL08p029214 Quercus lobata HOM05D005150 ORTHO05D006070 4.8e-15 85.1 104 50.0
Thecc.01G187900 Theobroma cacao HOM05D005150 ORTHO05D006070 3.1e-14 82.4 108 44.4
VMungo0647G0767 Vigna mungo HOM05D005150 ORTHO05D006070 3.1e-14 82.4 99 44.4
Phvul.008G205400 Phaseolus vulgaris HOM05D005150 ORTHO05D006070 4.0e-14 82.0 99 44.4
Solyc07g006590.1 Solanum lycopersicum HOM05D005150 ORTHO05D006070 4.0e-14 82.0 79 55.7
Sopen07g002670 Solanum pennellii HOM05D005150 ORTHO05D006070 4.0e-14 82.0 79 55.7
Haze_12715 Corylus avellana HOM05D005150 ORTHO05D006070 6.9e-14 81.3 99 48.5
Glyma.13G073800 Glycine max HOM05D005150 ORTHO05D006070 6.9e-14 81.3 105 46.7
Oeu040478.2 Olea europaea HOM05D005150 ORTHO05D006070 9.0e-14 80.9 104 46.2
CAN.G584.30 Capsicum annuum HOM05D005150 ORTHO05D006070 1.2e-13 80.5 96 49.0
Nn1g07416 Nelumbo nucifera HOM05D005150 ORTHO05D006070 1.2e-13 80.5 104 44.2
Gohir.A07G189900 Gossypium hirsutum HOM05D005150 ORTHO05D006070 5.8e-13 78.2 106 47.2
Gohir.D07G196100 Gossypium hirsutum HOM05D005150 ORTHO05D006070 5.8e-13 78.2 106 47.2
Gorai.001G219600 Gossypium raimondii HOM05D005150 ORTHO05D006070 5.8e-13 78.2 106 47.2
Lj6g0009976 Lotus japonicus HOM05D005150 ORTHO05D006070 5.8e-13 78.2 98 46.9
Gohir.A07G176012 Gossypium hirsutum HOM05D005150 ORTHO05D006070 1.3e-12 77.0 106 44.3
Glyma.14G039800 Glycine max HOM05D005150 ORTHO05D006070 1.7e-12 76.6 99 42.4
Oeu012338.1 Olea europaea HOM05D005150 ORTHO05D006070 1.7e-12 76.6 91 50.5
Phvul.006G020400 Phaseolus vulgaris HOM05D005150 ORTHO05D006070 2.2e-12 76.3 105 43.8
Cfa014266 Carpinus fangiana HOM05D005150 ORTHO05D006070 2.9e-12 75.9 83 51.8
Sed0012024 Sechium edule HOM05D005150 ORTHO05D006070 2.9e-12 75.9 102 46.1
CSS0044074 Camellia sinensis var. sinensis HOM05D005150 ORTHO05D006070 3.8e-12 75.5 95 48.4
DCAR_012901 Daucus carota HOM05D005150 ORTHO05D006070 3.8e-12 75.5 99 43.4
Rhsim06G0172300 Rhododendron simsii HOM05D005150 ORTHO05D006070 4.9e-12 75.1 107 43.9
CSS0010457 Camellia sinensis var. sinensis HOM05D005150 ORTHO05D006070 6.4e-12 74.7 96 52.1
CSS0040672 Camellia sinensis var. sinensis HOM05D005150 ORTHO05D006070 6.4e-12 74.7 96 52.1
Duzib138G1375 Durio zibethinus HOM05D005150 ORTHO05D006070 6.4e-12 74.7 110 41.8
Hma1.2p1_0133F.1_g061080 Hydrangea macrophylla HOM05D005150 ORTHO05D006070 6.4e-12 74.7 105 41.9
CiPaw.03G276700 Carya illinoinensis HOM05D005150 ORTHO05D006070 8.4e-12 74.3 103 42.7
MELO3C018891.2 Cucumis melo HOM05D005150 ORTHO05D006070 8.4e-12 74.3 106 44.3
HanXRQChr10g0306371 Helianthus annuus HOM05D005150 ORTHO05D006070 8.4e-12 74.3 102 44.1
CsaV3_7G002850 Cucumis sativus L. HOM05D005150 ORTHO05D006070 1.1e-11 73.9 105 43.8
Lalb_Chr19g0125521 Lupinus albus HOM05D005150 ORTHO05D006070 1.4e-11 73.6 95 44.2
Nitab4.5_0000244g0100 Nicotiana tabacum HOM05D005150 ORTHO05D006070 1.4e-11 73.6 73 53.4
ClCG02G002530 Citrullus lanatus HOM05D005150 ORTHO05D006070 1.9e-11 73.2 108 41.7
ClCG02G002570 Citrullus lanatus HOM05D005150 ORTHO05D006070 1.9e-11 73.2 108 41.7
COL.COLO4_25851 Corchorus olitorius HOM05D005150 ORTHO05D006070 1.9e-11 73.2 54 64.8
Nn1g03285 Nelumbo nucifera HOM05D005150 ORTHO05D006070 1.9e-11 73.2 108 40.7
Gorai.001G194000 Gossypium raimondii HOM05D005150 ORTHO05D006070 2.4e-11 72.8 106 43.4
Rhsim06G0172200 Rhododendron simsii HOM05D005150 ORTHO05D006070 3.2e-11 72.4 106 42.5
Actinidia21452 Actinidia chinensis HOM05D005150 ORTHO05D006070 4.2e-11 72.0 108 45.4
Sabra14G0124000 Salix brachista HOM05D005150 ORTHO05D006070 4.2e-11 72.0 99 41.4
LjContig00564g0005952 Lotus japonicus HOM05D005150 ORTHO05D006070 5.4e-11 71.6 100 42.0
vmacro12127 Vaccinium macrocarpon HOM05D005150 ORTHO05D006070 5.4e-11 71.6 106 42.5
arahy.Tifrunner.gnm1.ann1.CR4AH5 Arachis hypogaea HOM05D005150 ORTHO05D006070 1.2e-10 70.5 103 40.8
arahy.Tifrunner.gnm1.ann1.V5U7H6 Arachis hypogaea HOM05D005150 ORTHO05D006070 1.2e-10 70.5 103 40.8
Gohir.D11G157400 Gossypium hirsutum HOM05D005150 ORTHO05D006070 1.2e-10 70.5 99 42.4
Gorai.007G167900 Gossypium raimondii HOM05D005150 ORTHO05D006070 1.2e-10 70.5 99 42.4
Sed0026674 Sechium edule HOM05D005150 ORTHO05D006070 1.2e-10 70.5 98 42.9
Lsat_1_v5_gn_9_105581 Lactuca sativa HOM05D005150 ORTHO05D006070 1.6e-10 70.1 102 39.2
Cpa.g.sc136.7 Carica papaya HOM05D005150 ORTHO05D006070 2.7e-10 69.3 110 40.9
Gohir.A11G150900 Gossypium hirsutum HOM05D005150 ORTHO05D006070 2.7e-10 69.3 99 42.4
Rhsim04G0044800 Rhododendron simsii HOM05D005150 ORTHO05D006070 3.5e-10 68.9 102 44.1
Aqoxy1G04044 Aquilegia oxysepala HOM05D005150 ORTHO05D006070 6.0e-10 68.2 95 42.1
HanXRQChr03g0075721 Helianthus annuus HOM05D005150 ORTHO05D006070 7.9e-10 67.8 104 42.3
TPR.G14637 Trifolium pratense HOM05D005150 ORTHO05D006070 7.9e-10 67.8 99 40.4
TAR629G0945 Trochodendron aralioides HOM05D005150 ORTHO05D006070 7.9e-10 67.8 98 40.8
DCAR_032165 Daucus carota HOM05D005150 ORTHO05D006070 1.0e-09 67.4 106 40.6
HanXRQChr17g0535431 Helianthus annuus HOM05D005150 ORTHO05D006070 1.0e-09 67.4 89 44.9
Hma1.2p1_0405F.1_g145660 Hydrangea macrophylla HOM05D005150 ORTHO05D006070 1.3e-09 67.0 104 42.3
Lsat_1_v5_gn_5_124661 Lactuca sativa HOM05D005150 ORTHO05D006070 1.3e-09 67.0 99 41.4
Lj1g0017552 Lotus japonicus HOM05D005150 ORTHO05D006070 1.3e-09 67.0 79 45.6
Prupe.3G204400 Prunus persica HOM05D005150 ORTHO05D006070 1.3e-09 67.0 114 37.7
Sc06g0009750 Simmondsia chinensis HOM05D005150 ORTHO05D006070 1.3e-09 67.0 99 39.4
Medtr7g058970 Medicago truncatula HOM05D005150 ORTHO05D006070 1.8e-09 66.6 107 37.4
Potri.002G222900 Populus trichocarpa HOM05D005150 ORTHO05D006070 1.8e-09 66.6 97 43.3
Lsat_1_v5_gn_7_95641 Lactuca sativa HOM05D005150 ORTHO05D006070 2.3e-09 66.2 103 39.8
Medtr5g088550 Medicago truncatula HOM05D005150 ORTHO05D006070 2.3e-09 66.2 95 42.1
ECA234G4664 Erigeron canadensis HOM05D005150 ORTHO05D006070 3.0e-09 65.9 104 39.4
TAR624G1342 Trochodendron aralioides HOM05D005150 ORTHO05D006070 3.0e-09 65.9 91 42.9
Dinv07836 Davidia involucrata HOM05D005150 ORTHO05D006070 3.9e-09 65.5 95 44.2
Potri.014G162400 Populus trichocarpa HOM05D005150 ORTHO05D006070 3.9e-09 65.5 99 37.4
PGR142G3730 Punica granatum HOM05D005150 ORTHO05D006070 3.9e-09 65.5 98 43.9
TPR.G12632 Trifolium pratense HOM05D005150 ORTHO05D006070 3.9e-09 65.5 91 40.7
ECA240G3606 Erigeron canadensis HOM05D005150 ORTHO05D006070 6.7e-09 64.7 103 41.7
Atru.chr6.3335 Acer truncatum HOM05D005150 ORTHO05D006070 8.7e-09 64.3 118 37.3
Glyma.02G276100 Glycine max HOM05D005150 ORTHO05D006070 8.7e-09 64.3 103 37.9
FAN05G2177 Fragaria x ananassa HOM05D005150 ORTHO05D006070 1.1e-08 63.9 104 37.5
RcHm_v2.0_Chr2g0156971 Rosa chinensis HOM05D005150 ORTHO05D006070 1.1e-08 63.9 104 37.5
DCAR_021114 Daucus carota HOM05D005150 ORTHO05D006070 1.9e-08 63.2 86 44.2
Lalb_Chr04g0249481 Lupinus albus HOM05D005150 ORTHO05D006070 1.9e-08 63.2 46 58.7
FvH4_6g41440 Fragaria vesca HOM05D005150 ORTHO05D006070 2.5e-08 62.8 97 39.2
vmacro12128 Vaccinium macrocarpon HOM05D005150 ORTHO05D006070 3.3e-08 62.4 61 52.5
Manes.13G063792 Manihot esculenta HOM05D005150 ORTHO05D006070 5.6e-08 61.6 109 37.6
Ah.14g082900 Amaranthus hybridus HOM05D005150 ORTHO05D006070 7.4e-08 61.2 108 35.2
Manes.12G062667 Manihot esculenta HOM05D005150 ORTHO05D006070 7.4e-08 61.2 104 41.3
Manes.12G062700 Manihot esculenta HOM05D005150 ORTHO05D006070 7.4e-08 61.2 104 41.3
Peaxi162Scf00942g00037 Petunia axillaris HOM05D005150 ORTHO05D006070 7.4e-08 61.2 85 44.7
AUR62015079 Chenopodium quinoa HOM05D005150 ORTHO05D006070 9.6e-08 60.8 91 37.4
AUR62017541 Chenopodium quinoa HOM05D005150 ORTHO05D006070 9.6e-08 60.8 91 37.4
FAN02G0634 Fragaria x ananassa HOM05D005150 ORTHO05D006070 9.6e-08 60.8 104 36.5
HanXRQChr04g0126761 Helianthus annuus HOM05D005150 ORTHO05D006070 9.6e-08 60.8 82 39.0
MD09G1119700 Malus domestica HOM05D005150 ORTHO05D006070 1.6e-07 60.1 118 31.4
Eucgr.K00667 Eucalyptus grandis HOM05D005150 ORTHO05D006070 3.7e-07 58.9 94 41.5
Peaxi162Scf32072g00001 Petunia axillaris HOM05D005150 ORTHO05D006070 3.7e-07 58.9 75 50.7
Aa31sc697G10 Aethionema arabicum HOM05D005150 ORTHO05D006070 6.2e-07 58.2 96 36.5
ATR0712G027 Amborella trichopoda HOM05D005150 ORTHO05D006070 6.2e-07 58.2 118 36.4
AL7G44580 Arabidopsis lyrata HOM05D005150 ORTHO05D006070 1.1e-06 57.4 97 35.1
AUR62000791 Chenopodium quinoa HOM05D005150 ORTHO05D006070 1.4e-06 57.0 105 36.2
AT2G04795 Arabidopsis thaliana HOM05D005150 ORTHO05D006070 1.8e-06 56.6 98 36.7
MELO3C019368.2 Cucumis melo HOM05D005150 ORTHO05D006070 1.8e-06 56.6 102 35.3
AT5G35732 Arabidopsis thaliana HOM05D005150 ORTHO05D006070 3.1e-06 55.8 94 35.1
AL3G42390 Arabidopsis lyrata HOM05D005150 ORTHO05D006070 4.0e-06 55.5 98 33.7
EL10Ac9g22759 Beta vulgaris HOM05D005150 ORTHO05D006070 5.3e-06 55.1 112 33.0
AUR62005176 Chenopodium quinoa HOM05D005150 ORTHO05D006070 5.3e-06 55.1 105 35.2
CsaV3_6G009360 Cucumis sativus L. HOM05D005150 ORTHO05D006070 5.3e-06 55.1 101 32.7
FAN14G4944 Fragaria x ananassa HOM05D008097 ORTHO05D006070 9.0e-06 54.3 55 47.3


User provided reference genes

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