Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 3.5e-32 141.0 68 100.0
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 9.4e-30 132.9 68 91.2
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 6.1e-29 130.2 68 91.2
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 1.4e-28 129.0 67 91.0
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 1.5e-27 125.6 71 85.9
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 1.5e-27 125.6 71 85.9
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 2.6e-27 124.8 67 86.6
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 2.6e-27 124.8 67 86.6
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 5.7e-27 123.6 63 93.7
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 5.7e-27 123.6 68 80.9
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 7.4e-27 123.2 64 89.1
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.3e-26 122.5 68 80.9
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.3e-26 122.5 68 80.9
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 2.2e-26 121.7 67 80.6
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 2.8e-26 121.3 68 79.4
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 3.7e-26 120.9 66 81.8
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 4.8e-26 120.6 69 84.1
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 1.1e-25 119.4 64 81.2
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 1.4e-25 119.0 64 85.9
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.4e-25 119.0 68 77.9
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 1.4e-25 119.0 62 90.3
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 3.1e-25 117.9 61 85.2
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 7.0e-25 116.7 60 86.7
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 7.0e-25 116.7 62 85.5
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 7.0e-25 116.7 65 83.1
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 7.0e-25 116.7 68 80.9
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 9.1e-25 116.3 62 88.7
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 9.1e-25 116.3 62 88.7
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 9.1e-25 116.3 62 88.7
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 9.1e-25 116.3 62 88.7
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 9.1e-25 116.3 62 88.7
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 9.1e-25 116.3 62 88.7
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 9.1e-25 116.3 62 85.5
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 1.2e-24 115.9 64 82.8
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 1.6e-24 115.5 62 85.5
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 1.6e-24 115.5 62 85.5
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 2.0e-24 115.2 64 82.8
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 2.6e-24 114.8 58 86.2
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 2.6e-24 114.8 58 86.2
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 2.6e-24 114.8 68 75.0
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 2.6e-24 114.8 64 81.2
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 3.5e-24 114.4 62 83.9
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 4.5e-24 114.0 61 83.6
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 4.5e-24 114.0 62 85.5
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 5.9e-24 113.6 62 83.9
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 7.7e-24 113.2 64 76.6
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 7.7e-24 113.2 64 82.8
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 7.7e-24 113.2 64 81.2
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 1.0e-23 112.8 64 76.6
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 1.3e-23 112.5 62 80.6
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 1.3e-23 112.5 68 79.4
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 1.3e-23 112.5 68 79.4
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 1.7e-23 112.1 64 76.6
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 1.7e-23 112.1 64 76.6
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 1.7e-23 112.1 64 76.6
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 1.7e-23 112.1 64 76.6
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 1.7e-23 112.1 64 76.6
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 1.7e-23 112.1 64 76.6
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 2.9e-23 111.3 62 80.6
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 2.9e-23 111.3 66 77.3
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 3.8e-23 110.9 64 75.0
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 3.8e-23 110.9 64 75.0
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 3.8e-23 110.9 64 75.0
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 3.8e-23 110.9 64 75.0
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 3.8e-23 110.9 64 75.0
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 3.8e-23 110.9 58 84.5
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 3.8e-23 110.9 64 76.6
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 5.0e-23 110.5 67 77.6
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 1.1e-22 109.4 64 79.7
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 1.1e-22 109.4 64 79.7
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 1.1e-22 109.4 63 74.6
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 1.1e-22 109.4 63 74.6
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 1.5e-22 109.0 64 71.9
Oeu028466.1 Olea europaea HOM05D007303 ORTHO05D009231 1.5e-22 109.0 68 79.4
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 1.5e-22 109.0 61 78.7
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 2.5e-22 108.2 68 73.5
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 3.2e-22 107.8 62 79.0
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 4.2e-22 107.5 64 71.9
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 5.5e-22 107.1 60 78.3
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 7.2e-22 106.7 57 84.2
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 3.6e-21 104.4 64 78.1
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 4.7e-21 104.0 64 71.9
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 6.1e-21 103.6 58 77.6
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 8.0e-21 103.2 54 85.2
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 8.0e-21 103.2 60 76.7
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 1.4e-20 102.4 60 78.3
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 1.4e-20 102.4 55 81.8
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 2.0e-19 98.6 58 74.1
Cc09_g07100 Coffea canephora HOM05D007303 ORTHO05D009231 1.3e-18 95.9 67 73.1
Cc00_g04100 Coffea canephora HOM05D007303 ORTHO05D009231 8.3e-18 93.2 68 72.1
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 4.1e-17 90.9 62 64.5
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 1.6e-16 89.0 64 59.4
CiPaw.01G273900 Carya illinoinensis HOM05D007303 ORTHO05D009231 1.1e-14 82.8 58 69.0
Manes.08G168000 Manihot esculenta HOM05D007303 ORTHO05D009231 2.1e-13 78.6 44 79.5
Sabra04G0157400 Salix brachista HOM05D007303 ORTHO05D009231 6.8e-12 73.6 43 74.4
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 8.8e-12 73.2 40 82.5
Cc07_g13470 Coffea canephora HOM05D007303 ORTHO05D009231 1.2e-11 72.8 46 73.9
Mapoly0148s0030 Marchantia polymorpha HOM05D007303 ORTHO05D009231 2.8e-10 68.2 57 52.6
Zm00001eb290920 Zea mays HOM05D007303 ORTHO05D009231 4.8e-10 67.4 38 78.9
CSS0019093 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.1e-09 66.2 36 83.3
CSS0017493 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.4e-09 65.9 36 83.3
CSS0048723 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.4e-09 65.9 36 83.3
Pp3c10_5690 Physcomitrium patens HOM05D007303 ORTHO05D009231 1.4e-09 65.9 52 51.9
Pp3c10_5720 Physcomitrium patens HOM05D007303 ORTHO05D009231 1.4e-09 65.9 52 51.9
A03p36440 Brassica napus HOM05D007303 ORTHO05D009231 2.4e-09 65.1 36 77.8
CBR_g5630 Chara braunii HOM05D007303 ORTHO05D009231 9.1e-09 63.2 53 52.8


User provided reference genes

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