Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 1.9e-303 1045.0 518 100.0
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 3.0e-253 878.2 477 85.1
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 2.9e-240 835.1 513 75.6
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 7.2e-239 830.5 513 75.2
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 6.1e-238 827.4 520 74.6
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 2.3e-237 825.5 513 74.7
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 6.3e-235 817.4 503 76.9
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 1.7e-232 809.3 478 78.7
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 8.8e-229 797.0 484 77.9
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 2.0e-228 795.8 570 67.0
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 2.6e-228 795.4 478 76.8
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 9.8e-228 793.5 481 76.5
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 2.4e-226 788.9 484 76.7
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 3.5e-225 785.0 484 76.0
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 5.9e-225 784.3 481 77.5
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 7.7e-225 783.9 484 75.8
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 1.0e-224 783.5 482 76.8
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.2e-224 782.3 483 76.6
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 1.5e-223 779.6 485 75.5
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 9.4e-223 776.9 484 75.4
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 2.1e-222 775.8 512 71.3
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 6.1e-222 774.2 513 71.3
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 6.1e-222 774.2 484 75.8
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 1.4e-221 773.1 483 75.4
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 1.8e-221 772.7 481 75.3
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 5.2e-221 771.2 485 75.3
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 5.2e-221 771.2 513 70.6
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 1.2e-220 770.0 484 74.6
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 2.6e-220 768.8 486 74.1
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.4e-220 768.1 513 70.4
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.4e-220 768.1 513 70.4
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 5.7e-220 767.7 484 75.2
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 5.7e-220 767.7 513 70.8
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 5.7e-220 767.7 484 75.4
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 5.7e-220 767.7 512 71.7
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 4.9e-219 764.6 485 74.6
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 3.1e-218 761.9 483 74.1
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.1e-218 761.5 525 69.3
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 5.9e-217 757.7 512 70.1
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 2.9e-216 755.4 481 73.4
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 3.8e-216 755.0 483 73.9
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 3.8e-216 755.0 483 73.9
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 8.6e-216 753.8 488 73.2
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 1.5e-215 753.1 483 72.0
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 1.2e-214 750.0 481 72.6
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 1.6e-214 749.6 480 73.1
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 3.6e-214 748.4 481 72.8
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 4.7e-214 748.0 478 71.1
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 4.7e-214 748.0 481 72.3
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 1.0e-213 746.9 481 71.5
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 2.3e-213 745.7 482 71.8
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 3.0e-213 745.3 481 72.1
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 3.0e-213 745.3 483 71.8
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 4.0e-213 745.0 484 71.3
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 4.0e-213 745.0 518 68.3
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 8.9e-213 743.8 482 72.6
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 1.5e-212 743.0 477 71.3
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 5.7e-212 741.1 482 73.2
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 9.8e-212 740.3 481 71.9
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 1.3e-211 740.0 486 71.2
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 1.3e-211 740.0 479 72.9
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 1.7e-211 739.6 492 72.6
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 2.9e-211 738.8 480 70.6
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 4.1e-210 734.9 504 67.9
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 4.1e-210 734.9 489 72.0
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 1.2e-209 733.4 477 70.0
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 1.6e-209 733.0 515 66.8
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 2.7e-209 732.3 517 66.5
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 2.7e-209 732.3 494 70.4
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 2.7e-209 732.3 487 71.5
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 3.5e-209 731.9 517 66.5
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 5.9e-209 731.1 515 66.8
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 5.9e-209 731.1 515 66.8
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 4.3e-207 724.9 495 69.9
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 1.6e-206 723.0 483 71.4
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 3.6e-206 721.8 478 70.7
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 6.2e-206 721.1 482 71.4
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 6.2e-206 721.1 480 70.4
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 2.3e-205 719.2 508 66.7
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 6.8e-205 717.6 502 67.9
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 1.1e-202 710.3 457 73.1
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 3.2e-202 708.8 476 67.4
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 1.5e-199 699.9 503 66.2
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 1.6e-198 696.4 499 66.3
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 2.8e-198 695.7 513 65.3
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 4.7e-198 694.9 477 70.2
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 1.1e-197 693.7 518 64.3
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 5.8e-196 688.0 481 68.0
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 4.1e-194 681.8 490 66.1
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 1.6e-193 679.9 442 73.1
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 5.1e-192 674.9 490 65.1
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 9.5e-191 670.6 433 71.4
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.2e-188 663.7 479 65.6
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 1.2e-188 663.7 480 64.6
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 1.5e-183 646.7 353 83.3
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 2.1e-177 626.3 478 61.1
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 4.6e-177 625.2 484 61.2
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 1.1e-173 614.0 487 60.0
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 2.6e-172 609.4 490 59.4
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 3.2e-170 602.4 483 59.6
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 7.9e-169 597.8 414 68.4
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 1.8e-160 570.1 410 66.8
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 4.2e-122 442.6 408 52.2
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 1.7e-115 420.6 379 52.2
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 4.2e-114 416.0 396 49.5
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 5.5e-114 415.6 252 74.2
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 4.7e-113 412.5 402 49.8
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 4.2e-106 389.4 390 47.2
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 3.1e-72 276.9 160 76.2
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 3.1e-72 276.9 162 75.3
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 3.0e-51 207.2 120 80.0
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 2.2e-38 164.5 112 68.8
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 3.3e-34 150.6 336 31.0
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 8.8e-27 125.9 108 55.6
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 4.4e-18 97.1 62 64.5
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 2.2e-14 84.7 56 62.5
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 1.1e-10 72.4 48 62.5
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 1.1e-10 72.4 48 62.5
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 1.1e-10 72.4 48 62.5
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 1.8e-08 65.1 119 31.1
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 1.2e-07 62.4 99 31.3


User provided reference genes

Program Settings