Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L02013 Erythranthe guttata HOM05D003907 ORTHO05D004819 9.8e-281 969.5 510 100.0
MSTRG.10218 Avicennia marina HOM05D003907 ORTHO05D004819 1.7e-261 905.6 510 91.2
Oeu041306.1 Olea europaea HOM05D003907 ORTHO05D004819 8.6e-261 903.3 510 91.8
SGA_v2.0_scaffold110G31215 Striga asiatica HOM05D003907 ORTHO05D004819 8.6e-261 903.3 510 91.2
MSTRG.26811 Avicennia marina HOM05D003907 ORTHO05D004819 1.1e-260 902.9 510 91.0
Migut.J00170 Erythranthe guttata HOM05D003907 ORTHO05D004819 3.4e-257 891.3 510 90.6
GSVIVG01033959001 Vitis vinifera HOM05D003907 ORTHO05D004819 4.9e-256 887.5 510 89.2
TWI53G0466 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 8.3e-256 886.7 510 88.8
PGSC0003DMG400023084 Solanum tuberosum HOM05D003907 ORTHO05D004819 4.1e-255 884.4 510 88.6
Manes.09G104800 Manihot esculenta HOM05D003907 ORTHO05D004819 5.4e-255 884.0 510 88.6
Dinv23105 Davidia involucrata HOM05D003907 ORTHO05D004819 7.1e-255 883.6 510 89.0
Sopen09g001280 Solanum pennellii HOM05D003907 ORTHO05D004819 9.2e-255 883.2 510 88.6
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 9.2e-255 883.2 494 92.1
Solyc09g005310.3 Solanum lycopersicum HOM05D003907 ORTHO05D004819 1.2e-254 882.9 510 88.4
Actinidia05367 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.6e-254 882.5 512 89.5
Prupe.6G277300 Prunus persica HOM05D003907 ORTHO05D004819 2.7e-254 881.7 510 89.0
CAN.G5.12 Capsicum annuum HOM05D003907 ORTHO05D004819 6.0e-254 880.6 510 87.8
Nitab4.5_0000511g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 7.8e-254 880.2 510 88.8
Lj2A75G35 Lonicera japonica HOM05D003907 ORTHO05D004819 1.0e-253 879.8 510 89.6
Potri.006G100200 Populus trichocarpa HOM05D003907 ORTHO05D004819 2.3e-253 878.6 510 87.5
Nitab4.5_0000335g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 3.0e-253 878.2 510 88.6
TWI74G1106 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 6.6e-253 877.1 510 87.8
Ciclev10011517m.g Citrus clementina HOM05D003907 ORTHO05D004819 8.6e-253 876.7 511 87.9
Cc06_g01360 Coffea canephora HOM05D003907 ORTHO05D004819 1.1e-252 876.3 510 88.4
Duzib106G0096 Durio zibethinus HOM05D003907 ORTHO05D004819 7.3e-252 873.6 511 87.5
Manes.09G105700 Manihot esculenta HOM05D003907 ORTHO05D004819 9.5e-252 873.2 510 87.3
CSS0040367 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 1.2e-251 872.8 511 89.0
Potri.016G116200 Populus trichocarpa HOM05D003907 ORTHO05D004819 1.6e-251 872.5 510 86.7
Nn2g11497 Nelumbo nucifera HOM05D003907 ORTHO05D004819 2.1e-251 872.1 510 87.6
Gohir.A09G165200 Gossypium hirsutum HOM05D003907 ORTHO05D004819 6.2e-251 870.5 511 87.9
TAR636G2600 Trochodendron aralioides HOM05D003907 ORTHO05D004819 6.2e-251 870.5 510 87.6
THA.LOC104823300 Tarenaya hassleriana HOM05D003907 ORTHO05D004819 8.1e-251 870.2 510 87.5
Carub.0006s0037 Capsella rubella HOM05D003907 ORTHO05D004819 1.8e-250 869.0 510 86.1
SalBow5G2920 Salvia bowleyana HOM05D003907 ORTHO05D004819 1.8e-250 869.0 510 87.8
Glyma.18G200800 Glycine max HOM05D003907 ORTHO05D004819 2.3e-250 868.6 510 87.1
Gohir.D09G160800 Gossypium hirsutum HOM05D003907 ORTHO05D004819 3.1e-250 868.2 511 87.5
Lsat_1_v5_gn_9_34621 Lactuca sativa HOM05D003907 ORTHO05D004819 4.0e-250 867.8 510 86.5
CsaV3_4G026280 Cucumis sativus L. HOM05D003907 ORTHO05D004819 5.2e-250 867.5 510 87.1
Thhalv10013023m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 5.2e-250 867.5 510 86.1
Sabra16G0111700 Salix brachista HOM05D003907 ORTHO05D004819 5.2e-250 867.5 510 86.1
Thecc.05G016000 Theobroma cacao HOM05D003907 ORTHO05D004819 5.2e-250 867.5 511 87.3
AL6G10610 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 6.8e-250 867.1 510 86.1
AT5G01460 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 8.9e-250 866.7 510 86.1
CANSAT35G0110 Cannabis sativa HOM05D003907 ORTHO05D004819 8.9e-250 866.7 510 87.8
ClCG04G006990 Citrullus lanatus HOM05D003907 ORTHO05D004819 8.9e-250 866.7 510 87.1
Gorai.006G182500 Gossypium raimondii HOM05D003907 ORTHO05D004819 8.9e-250 866.7 511 87.3
CSS0038026 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 1.5e-249 865.9 510 87.8
CiPaw.09G209200 Carya illinoinensis HOM05D003907 ORTHO05D004819 1.5e-249 865.9 510 87.6
AL3G19930 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 2.0e-249 865.5 510 86.1
Glyma.07G149900 Glycine max HOM05D003907 ORTHO05D004819 2.6e-249 865.1 510 86.7
AT3G08930 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 3.4e-249 864.8 510 85.9
HanXRQChr10g0299881 Helianthus annuus HOM05D003907 ORTHO05D004819 3.4e-249 864.8 510 86.9
TAR633G0126 Trochodendron aralioides HOM05D003907 ORTHO05D004819 3.4e-249 864.8 510 87.3
MD12G1166000 Malus domestica HOM05D003907 ORTHO05D004819 4.4e-249 864.4 510 87.6
CARHR211830 Cardamine hirsuta HOM05D003907 ORTHO05D004819 5.8e-249 864.0 510 85.3
Cfa017208 Carpinus fangiana HOM05D003907 ORTHO05D004819 7.6e-249 863.6 510 87.1
Sp6g40750 Schrenkiella parvula HOM05D003907 ORTHO05D004819 1.3e-248 862.8 510 85.9
Atru.chr8.2242 Acer truncatum HOM05D003907 ORTHO05D004819 2.2e-248 862.1 511 86.5
unitig_8.g3229 Utricularia gibba HOM05D003907 ORTHO05D004819 2.2e-248 862.1 510 86.1
arahy.Tifrunner.gnm1.ann1.NAY5W3 Arachis hypogaea HOM05D003907 ORTHO05D004819 2.9e-248 861.7 510 85.9
arahy.Tifrunner.gnm1.ann1.S2G015 Arachis hypogaea HOM05D003907 ORTHO05D004819 2.9e-248 861.7 510 85.9
Carub.0003s0804 Capsella rubella HOM05D003907 ORTHO05D004819 4.9e-248 860.9 510 85.9
QL07p019755 Quercus lobata HOM05D003907 ORTHO05D004819 1.4e-247 859.4 509 86.6
Sed0026155 Sechium edule HOM05D003907 ORTHO05D004819 1.4e-247 859.4 510 85.9
Psat3g128200 Pisum sativum HOM05D003907 ORTHO05D004819 1.9e-247 859.0 510 85.5
Aqoxy4G02574 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 2.4e-247 858.6 511 85.3
TPR.G13353 Trifolium pratense HOM05D003907 ORTHO05D004819 4.1e-247 857.8 511 85.9
Thhalv10020541m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 2.7e-246 855.1 510 84.9
PGR004G0735 Punica granatum HOM05D003907 ORTHO05D004819 2.7e-246 855.1 510 86.3
MD04G1152700 Malus domestica HOM05D003907 ORTHO05D004819 3.5e-246 854.7 510 86.3
DCAR_018702 Daucus carota HOM05D003907 ORTHO05D004819 6.0e-246 854.0 511 85.9
CARHR083260 Cardamine hirsuta HOM05D003907 ORTHO05D004819 1.7e-245 852.4 510 84.7
Sp3g07320 Schrenkiella parvula HOM05D003907 ORTHO05D004819 1.7e-245 852.4 510 84.7
Sed0027660 Sechium edule HOM05D003907 ORTHO05D004819 6.6e-245 850.5 510 85.5
BcaB04g18559 Brassica carinata HOM05D003907 ORTHO05D004819 5.6e-244 847.4 510 84.5
vmacro11169 Vaccinium macrocarpon HOM05D003907 ORTHO05D004819 7.3e-244 847.0 549 80.9
C05p58960 Brassica napus HOM05D003907 ORTHO05D004819 9.6e-244 846.7 510 84.3
BolC5t34549H Brassica oleracea HOM05D003907 ORTHO05D004819 1.2e-243 846.3 510 84.1
Ca_20232_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 1.2e-243 846.3 510 84.5
Phvul.008G104400 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 1.6e-243 845.9 510 84.7
BraSC256t45932Z Brassica rapa HOM05D003907 ORTHO05D004819 2.1e-243 845.5 510 84.1
Medtr7g068440 Medicago truncatula HOM05D003907 ORTHO05D004819 2.1e-243 845.5 510 84.7
Aqoxy2G00900 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 6.2e-243 844.0 511 84.7
Ah.12g058610 Amaranthus hybridus HOM05D003907 ORTHO05D004819 8.1e-243 843.6 510 85.3
RcHm_v2.0_Chr3g0463141 Rosa chinensis HOM05D003907 ORTHO05D004819 8.1e-243 843.6 510 85.5
FAN09G4250 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.1e-242 843.2 510 85.5
ATR0618G011 Amborella trichopoda HOM05D003907 ORTHO05D004819 2.4e-242 842.0 511 84.7
Haze_21003 Corylus avellana HOM05D003907 ORTHO05D004819 2.4e-242 842.0 527 83.3
Lj3g0019592 Lotus japonicus HOM05D003907 ORTHO05D004819 2.4e-242 842.0 510 84.3
CiPaw.10G156600 Carya illinoinensis HOM05D003907 ORTHO05D004819 6.9e-242 840.5 510 84.9
FAN02G2014 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.5e-241 839.3 510 85.1
Glyma.03G058100 Glycine max HOM05D003907 ORTHO05D004819 1.5e-241 839.3 510 84.7
EL10Ac5g12561 Beta vulgaris HOM05D003907 ORTHO05D004819 2.0e-241 839.0 510 84.7
FvH4_6g11450 Fragaria vesca HOM05D003907 ORTHO05D004819 4.4e-241 837.8 510 84.7
FAN14G1433 Fragaria x ananassa HOM05D003907 ORTHO05D004819 4.4e-241 837.8 510 84.7
FAN14G5854 Fragaria x ananassa HOM05D003907 ORTHO05D004819 4.4e-241 837.8 510 84.7
Glyma.01G122100 Glycine max HOM05D003907 ORTHO05D004819 4.4e-241 837.8 510 84.5
Lj3A953T53 Lonicera japonica HOM05D003907 ORTHO05D004819 2.9e-240 835.1 522 83.1
AUR62010458 Chenopodium quinoa HOM05D003907 ORTHO05D004819 6.4e-240 833.9 511 84.9
PSO339G6136 Papaver somniferum HOM05D003907 ORTHO05D004819 8.4e-240 833.6 511 84.1
Rhsim03G0144200 Rhododendron simsii HOM05D003907 ORTHO05D004819 8.4e-240 833.6 505 86.1
Hund14296 Selenicereus undatus HOM05D003907 ORTHO05D004819 1.4e-239 832.8 511 84.5
Eucgr.B02811 Eucalyptus grandis HOM05D003907 ORTHO05D004819 1.9e-239 832.4 494 87.0
PSO801G0155 Papaver somniferum HOM05D003907 ORTHO05D004819 3.2e-239 831.6 511 84.0
Aa31LG1G23090 Aethionema arabicum HOM05D003907 ORTHO05D004819 7.1e-239 830.5 494 85.6
Lalb_Chr01g0023081 Lupinus albus HOM05D003907 ORTHO05D004819 4.6e-238 827.8 512 83.8
A03p36270 Brassica napus HOM05D003907 ORTHO05D004819 5.6e-236 820.8 510 82.2
A05p39920 Brassica napus HOM05D003907 ORTHO05D004819 5.6e-236 820.8 494 84.4
C03p43910 Brassica napus HOM05D003907 ORTHO05D004819 5.6e-236 820.8 510 82.2
BolC3t16659H Brassica oleracea HOM05D003907 ORTHO05D004819 7.3e-236 820.5 510 82.0
Oeu064499.2 Olea europaea HOM05D003907 ORTHO05D004819 9.6e-236 820.1 547 80.3
BraA03t12798Z Brassica rapa HOM05D003907 ORTHO05D004819 1.6e-235 819.3 510 82.0
Lalb_Chr03g0043281 Lupinus albus HOM05D003907 ORTHO05D004819 4.8e-235 817.8 512 82.2
FAN05G4390 Fragaria x ananassa HOM05D003907 ORTHO05D004819 2.6e-233 812.0 507 83.2
COL.COLO4_14536 Corchorus olitorius HOM05D003907 ORTHO05D004819 1.7e-232 809.3 472 88.1
Sabra06G0077000 Salix brachista HOM05D003907 ORTHO05D004819 2.9e-232 808.5 556 77.2
Zm00001eb269470 Zea mays HOM05D003907 ORTHO05D004819 4.9e-232 807.7 511 80.8
ECA247G1720 Erigeron canadensis HOM05D003907 ORTHO05D004819 3.2e-231 805.1 486 83.7
CDE05G1648 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 5.4e-231 804.3 511 80.4
VMungo0331G1185 Vigna mungo HOM05D003907 ORTHO05D004819 2.3e-229 798.9 494 83.8
AUR62030453 Chenopodium quinoa HOM05D003907 ORTHO05D004819 2.8e-227 792.0 512 81.8
Zm00001eb378570 Zea mays HOM05D003907 ORTHO05D004819 1.1e-226 790.0 509 80.0
CDE05G1838 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 6.9e-226 787.3 511 79.1
Peaxi162Scf00141g01026 Petunia axillaris HOM05D003907 ORTHO05D004819 9.0e-226 786.9 510 81.0
Ca_07641_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 2.1e-222 775.8 524 78.2
Ca_30080_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 2.1e-222 775.8 524 78.2
Lalb_Chr19g0124541 Lupinus albus HOM05D003907 ORTHO05D004819 1.3e-219 766.5 512 78.3
Phvul.010G001200 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 1.5e-217 759.6 510 78.0
BcaC05g29627 Brassica carinata HOM05D003907 ORTHO05D004819 1.9e-212 742.7 440 85.5
MELO3C003291.2 Cucumis melo HOM05D003907 ORTHO05D004819 4.8e-203 711.4 472 80.3
Duzib128G0387 Durio zibethinus HOM05D003907 ORTHO05D004819 3.8e-200 701.8 511 74.4
Lj3g0026649 Lotus japonicus HOM05D003907 ORTHO05D004819 3.9e-197 691.8 413 85.7
Duzib093G1828 Durio zibethinus HOM05D003907 ORTHO05D004819 1.3e-195 686.8 501 73.5
Actinidia20733 Actinidia chinensis HOM05D003907 ORTHO05D004819 2.2e-195 686.0 510 72.9
Mapoly0058s0053 Marchantia polymorpha HOM05D003907 ORTHO05D004819 5.3e-194 681.4 514 66.5
SMO367G0485 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.2e-184 649.4 503 67.2
unitig_22.g6592 Utricularia gibba HOM05D003907 ORTHO05D004819 3.6e-182 642.1 468 72.9
Cpa.g.sc11.141 Carica papaya HOM05D003907 ORTHO05D004819 4.8e-179 631.7 375 84.5
Pp3c13_15020 Physcomitrium patens HOM05D003907 ORTHO05D004819 4.5e-177 625.2 514 60.7
Sc01g0006450 Simmondsia chinensis HOM05D003907 ORTHO05D004819 1.4e-173 613.6 365 86.8
CBR_g53729 Chara braunii HOM05D003907 ORTHO05D004819 4.5e-169 598.6 515 60.0
CBR_g40208 Chara braunii HOM05D003907 ORTHO05D004819 1.0e-168 597.4 511 61.3
HPP92_003698 Vanilla planifolia HOM05D003907 ORTHO05D004819 1.0e-168 597.4 382 79.8
TPR.G7076 Trifolium pratense HOM05D003907 ORTHO05D004819 1.7e-168 596.7 364 84.6
DCAR_015417 Daucus carota HOM05D003907 ORTHO05D004819 3.0e-165 585.9 504 66.5
SMO146G0061 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 3.1e-162 575.9 494 57.5
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.1e-159 567.4 347 85.0
Hma1.2p1_0362F.1_g136250 Hydrangea macrophylla HOM05D003907 ORTHO05D004819 1.9e-159 566.6 325 90.2
Pp3c23_4110 Physcomitrium patens HOM05D003907 ORTHO05D004819 5.4e-154 548.5 499 54.1
Actinidia11586 Actinidia chinensis HOM05D003907 ORTHO05D004819 7.3e-151 538.1 457 67.6
Glyma.16G099300 Glycine max HOM05D003907 ORTHO05D004819 7.0e-146 521.5 307 87.9
Actinidia27153 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.3e-139 500.7 284 90.8
AagrBONN_evm.TU.Sc2ySwM_368.1024 Anthoceros agrestis HOM05D003907 ORTHO05D004819 7.6e-132 474.9 383 63.2
Actinidia29101 Actinidia chinensis HOM05D003907 ORTHO05D004819 5.8e-124 448.7 254 90.9
PRCOL_00002088 Prasinoderma coloniale HOM05D003907 ORTHO05D004819 1.7e-115 420.6 516 45.7
Actinidia29102 Actinidia chinensis HOM05D003907 ORTHO05D004819 6.7e-112 408.7 245 86.5
MCO03G500 Micromonas commoda HOM05D003907 ORTHO05D004819 3.5e-105 386.3 486 44.2
SMO015G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 4.6e-105 386.0 386 53.1
SEGI_00285 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 1.5e-100 370.9 285 70.2
Cre01.g023400 Chlamydomonas reinhardtii HOM05D003907 ORTHO05D004819 5.3e-93 345.9 511 38.2
CSS0040994 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 2.9e-83 313.5 199 85.4
SMO173G0027 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.8e-70 270.4 343 44.3
TPR.G8133 Trifolium pratense HOM05D003907 ORTHO05D038338 3.0e-64 250.4 503 37.2
SEGI_07345 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 1.0e-59 235.3 144 82.6
SMO173G0021 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 5.5e-58 229.6 310 43.2
SMO023G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D376622 2.3e-56 224.2 366 40.4
ATR0759G042 Amborella trichopoda HOM05D003907 ORTHO05D038338 1.5e-47 194.9 117 81.2
SMO146G0194 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.8e-46 190.7 206 51.0
ATR0759G047 Amborella trichopoda HOM05D003907 ORTHO05D004819 4.9e-46 189.9 143 74.1
SMO173G0002 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.7e-43 181.4 197 50.3
Ca_20230_v3 Cicer arietinum L. HOM05D003907 ORTHO05D148210 2.3e-35 154.5 106 76.4
SMO146G0334 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.5e-31 141.7 119 55.5
BcaC01g04205 Brassica carinata HOM05D003907 ORTHO05D004819 4.9e-30 136.7 82 87.8
VMungo1080G1595 Vigna mungo HOM05D003907 ORTHO05D004819 7.1e-21 106.3 121 57.9
SMO173G0093 Selaginella moellendorffii HOM05D003907 ORTHO05D378519 1.9e-10 71.6 61 57.4
arahy.Tifrunner.gnm1.ann1.7H636Z Arachis hypogaea HOM05D005380 ORTHO05D006601 8.1e-09 66.2 37 83.8
arahy.Tifrunner.gnm1.ann1.W1QHU6 Arachis hypogaea HOM05D003907 ORTHO05D018508 2.4e-08 64.7 85 51.8
PSO541G6111 Papaver somniferum HOM05D003907 ORTHO05D305003 8.4e-06 56.2 38 71.1


User provided reference genes

Program Settings