Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01966 Erythranthe guttata HOM05D007574 ORTHO05D007552 1.6e-45 185.7 91 100.0
Dinv37135 Davidia involucrata HOM05D007574 ORTHO05D007552 3.2e-17 91.7 85 58.8
Rhsim05G0196100 Rhododendron simsii HOM05D007574 ORTHO05D007552 1.0e-15 86.7 84 57.1
CSS0039527 Camellia sinensis var. sinensis HOM05D007574 ORTHO05D007552 3.0e-15 85.1 85 55.3
Oeu001849.1 Olea europaea HOM05D007574 ORTHO05D007552 2.5e-14 82.0 82 58.5
Hma1.2p1_0766F.1_g215190 Hydrangea macrophylla HOM05D007574 ORTHO05D007552 4.3e-14 81.3 85 52.9
Eucgr.B02706 Eucalyptus grandis HOM05D007574 ORTHO05D007552 9.7e-14 80.1 76 59.2
Nn2g13483 Nelumbo nucifera HOM05D007574 ORTHO05D007552 1.7e-13 79.3 81 54.3
QL07p028963 Quercus lobata HOM05D007574 ORTHO05D007552 1.7e-13 79.3 71 59.2
QL07p029642 Quercus lobata HOM05D007574 ORTHO05D007552 1.7e-13 79.3 71 59.2
Rhsim05G0198100 Rhododendron simsii HOM05D007574 ORTHO05D007552 3.7e-13 78.2 84 52.4
TAR633G0850 Trochodendron aralioides HOM05D007574 ORTHO05D007552 2.4e-12 75.5 81 50.6
Duzib106G1300 Durio zibethinus HOM05D007574 ORTHO05D007552 3.1e-12 75.1 88 50.0
Manes.09G095800 Manihot esculenta HOM05D007574 ORTHO05D007552 2.0e-11 72.4 83 53.0
Potri.006G090100 Populus trichocarpa HOM05D007574 ORTHO05D007552 2.6e-11 72.0 88 48.9
Sabra06G0068200 Salix brachista HOM05D007574 ORTHO05D007552 2.6e-11 72.0 85 49.4
Aqoxy2G02344 Aquilegia oxysepala HOM05D007574 ORTHO05D007552 4.5e-11 71.2 79 49.4
Gorai.012G106400 Gossypium raimondii HOM05D007574 ORTHO05D007552 4.5e-11 71.2 92 47.8
GSVIVG01034109001 Vitis vinifera HOM05D007574 ORTHO05D007552 4.5e-11 71.2 86 52.3
Manes.08G080600 Manihot esculenta HOM05D007574 ORTHO05D007552 7.7e-11 70.5 90 45.6
Prupe.6G261000 Prunus persica HOM05D007574 ORTHO05D007552 7.7e-11 70.5 84 52.4
MD04G1135900 Malus domestica HOM05D007574 ORTHO05D007552 1.0e-10 70.1 84 47.6
Gohir.D04G123600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 1.7e-10 69.3 92 46.7
TWI77G0884 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 1.7e-10 69.3 83 50.6
Nn2g11240 Nelumbo nucifera HOM05D007574 ORTHO05D007552 2.2e-10 68.9 81 50.6
PGR031G1556 Punica granatum HOM05D007574 ORTHO05D007552 2.2e-10 68.9 82 51.2
MBI05_g35175_MAGBIO Magnolia biondii HOM05D007574 ORTHO05D007552 2.9e-10 68.6 85 45.9
CiPaw.09G197900 Carya illinoinensis HOM05D007574 ORTHO05D007552 3.8e-10 68.2 91 49.5
Lj3g0003670 Lotus japonicus HOM05D007574 ORTHO05D007552 1.1e-09 66.6 89 48.3
Gohir.D01G210600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 1.4e-09 66.2 80 48.8
Gorai.002G256300 Gossypium raimondii HOM05D007574 ORTHO05D007552 1.4e-09 66.2 80 48.8
Duzib128G0069 Durio zibethinus HOM05D007574 ORTHO05D007552 2.5e-09 65.5 87 47.1
MD12G1149400 Malus domestica HOM05D007574 ORTHO05D007552 2.5e-09 65.5 85 48.2
Thecc.05G033200 Theobroma cacao HOM05D007574 ORTHO05D007552 2.5e-09 65.5 87 47.1
Peaxi162Scf00330g00113 Petunia axillaris HOM05D007574 ORTHO05D007552 3.2e-09 65.1 102 46.1
Ciclev10013212m.g Citrus clementina HOM05D007574 ORTHO05D007552 4.2e-09 64.7 80 50.0
ClCG10G021430 Citrullus lanatus HOM05D007574 ORTHO05D007552 7.2e-09 63.9 90 48.9
Nitab4.5_0004744g0030 Nicotiana tabacum HOM05D007574 ORTHO05D007552 7.2e-09 63.9 72 56.9
TAR623G1460 Trochodendron aralioides HOM05D007574 ORTHO05D007552 7.2e-09 63.9 86 47.7
Gohir.A01G221600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 9.4e-09 63.5 72 51.4
PGSC0003DMG400019195 Solanum tuberosum HOM05D007574 ORTHO05D007552 1.2e-08 63.2 100 45.0
Glyma.01G102300 Glycine max HOM05D007574 ORTHO05D007552 1.6e-08 62.8 85 48.2
Gohir.A04G084700 Gossypium hirsutum HOM05D007574 ORTHO05D007552 1.6e-08 62.8 95 43.2
Phvul.008G115600 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 1.6e-08 62.8 76 48.7
Potri.016G101900 Populus trichocarpa HOM05D007574 ORTHO05D007552 1.6e-08 62.8 85 43.5
FAN05G1951 Fragaria x ananassa HOM05D007574 ORTHO05D007552 2.1e-08 62.4 86 44.2
Phvul.010G016401 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 2.1e-08 62.4 62 56.5
TPR.G5586 Trifolium pratense HOM05D007574 ORTHO05D007552 3.6e-08 61.6 82 47.6
MELO3C009230.2 Cucumis melo HOM05D007574 ORTHO05D007552 4.7e-08 61.2 92 48.9
Cpa.g.c39617 Carica papaya HOM05D007574 ORTHO05D007552 6.1e-08 60.8 90 45.6
Glyma.03G067200 Glycine max HOM05D007574 ORTHO05D007552 7.9e-08 60.5 86 45.3
RcHm_v2.0_Chr3g0465351 Rosa chinensis HOM05D007574 ORTHO05D007552 7.9e-08 60.5 86 43.0
TWI53G1464 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 7.9e-08 60.5 84 46.4
FAN09G4076 Fragaria x ananassa HOM05D007574 ORTHO05D007552 2.3e-07 58.9 86 43.0
Solyc10g086630.2 Solanum lycopersicum HOM05D007574 ORTHO05D007552 2.3e-07 58.9 86 45.3
ATR0665G027 Amborella trichopoda HOM05D007574 ORTHO05D007552 3.0e-07 58.5 73 46.6
CiPaw.10G148000 Carya illinoinensis HOM05D007574 ORTHO05D007552 3.0e-07 58.5 100 43.0
Sopen10g036030 Solanum pennellii HOM05D007574 ORTHO05D007552 3.0e-07 58.5 87 44.8
Atru.chr8.2052 Acer truncatum HOM05D007574 ORTHO05D007552 3.9e-07 58.2 85 43.5
Atru.chr8.2045 Acer truncatum HOM05D007574 ORTHO05D007552 5.1e-07 57.8 44 59.1
DCAR_012128 Daucus carota HOM05D007574 ORTHO05D007552 5.1e-07 57.8 71 50.7
Glyma.18G187300 Glycine max HOM05D007574 ORTHO05D007552 5.1e-07 57.8 83 44.6
CsaV3_3G034590 Cucumis sativus L. HOM05D007574 ORTHO05D007552 8.8e-07 57.0 89 47.2
Lalb_Chr03g0042511 Lupinus albus HOM05D007574 ORTHO05D007552 1.1e-06 56.6 88 42.0
Eucgr.K03060 Eucalyptus grandis HOM05D007574 ORTHO05D007552 1.5e-06 56.2 77 42.9
Medtr4g021330 Medicago truncatula HOM05D007574 ORTHO05D007552 1.5e-06 56.2 44 63.6
HPP92_019232 Vanilla planifolia HOM05D007574 ORTHO05D007552 1.5e-06 56.2 72 43.1
Lalb_Chr19g0125161 Lupinus albus HOM05D007574 ORTHO05D007552 2.6e-06 55.5 90 40.0
Medtr7g063490 Medicago truncatula HOM05D007574 ORTHO05D007552 2.6e-06 55.5 79 45.6
SalBow5G2190 Salvia bowleyana HOM05D007574 ORTHO05D007552 4.4e-06 54.7 44 61.4


User provided reference genes

Program Settings