Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01960 Erythranthe guttata HOM05D005845 ORTHO05D007067 4.4e-56 221.1 113 100.0
ECA233G0482 Erigeron canadensis HOM05D005845 ORTHO05D007067 1.8e-30 136.0 108 65.7
Lsat_1_v5_gn_6_22520 Lactuca sativa HOM05D005845 ORTHO05D007067 2.4e-30 135.6 108 65.7
Hma1.2p1_0936F.1_g238990 Hydrangea macrophylla HOM05D005845 ORTHO05D007067 5.4e-30 134.4 82 78.0
HanXRQChr02g0050481 Helianthus annuus HOM05D005845 ORTHO05D007067 7.0e-30 134.0 111 65.8
Potri.006G088200 Populus trichocarpa HOM05D005845 ORTHO05D007067 7.0e-30 134.0 89 73.0
vmacro20178 Vaccinium macrocarpon HOM05D005845 ORTHO05D007067 7.0e-30 134.0 87 78.2
GSVIVG01034129001 Vitis vinifera HOM05D005845 ORTHO05D007067 9.2e-30 133.7 96 69.8
Nitab4.5_0000705g0030 Nicotiana tabacum HOM05D005845 ORTHO05D007067 1.6e-29 132.9 116 62.9
Peaxi162Scf00527g00733 Petunia axillaris HOM05D005845 ORTHO05D007067 1.6e-29 132.9 116 65.5
Cc06_g02340 Coffea canephora HOM05D005845 ORTHO05D007067 2.0e-29 132.5 124 59.7
SalBow1G4544 Salvia bowleyana HOM05D005845 ORTHO05D007067 2.0e-29 132.5 92 73.9
SalBow7G2664 Salvia bowleyana HOM05D005845 ORTHO05D007067 2.0e-29 132.5 92 73.9
PGSC0003DMG400008901 Solanum tuberosum HOM05D005845 ORTHO05D007067 2.0e-29 132.5 112 64.3
Lalb_Chr03g0042411 Lupinus albus HOM05D005845 ORTHO05D007067 2.7e-29 132.1 85 75.3
Rhsim05G0194900 Rhododendron simsii HOM05D005845 ORTHO05D007067 2.7e-29 132.1 87 75.9
TAR633G1228 Trochodendron aralioides HOM05D005845 ORTHO05D007067 2.7e-29 132.1 120 60.0
Nitab4.5_0003394g0030 Nicotiana tabacum HOM05D005845 ORTHO05D007067 3.5e-29 131.7 115 62.6
Psat3g137040 Pisum sativum HOM05D005845 ORTHO05D007067 3.5e-29 131.7 81 79.0
Haze_20829 Corylus avellana HOM05D005320 ORTHO05D007922 4.5e-29 131.3 118 60.2
Solyc09g011010.3 Solanum lycopersicum HOM05D005845 ORTHO05D007067 4.5e-29 131.3 112 64.3
Sopen09g005730 Solanum pennellii HOM05D005845 ORTHO05D007067 4.5e-29 131.3 112 64.3
TAR633G1058 Trochodendron aralioides HOM05D005845 ORTHO05D007067 4.5e-29 131.3 82 76.8
RcHm_v2.0_Chr3g0466071 Rosa chinensis HOM05D005845 ORTHO05D007067 5.9e-29 131.0 119 64.7
Aqoxy1G00879 Aquilegia oxysepala HOM05D005845 ORTHO05D007067 7.8e-29 130.6 87 74.7
CiPaw.10G147000 Carya illinoinensis HOM05D005845 ORTHO05D007067 1.0e-28 130.2 81 77.8
COL.COLO4_14759 Corchorus olitorius HOM05D005845 ORTHO05D007067 1.0e-28 130.2 114 59.6
CsaV3_3G034730 Cucumis sativus L. HOM05D005845 ORTHO05D007067 1.0e-28 130.2 82 73.2
Nn2g13425 Nelumbo nucifera HOM05D005845 ORTHO05D007067 1.0e-28 130.2 98 65.3
QL07p030115 Quercus lobata HOM05D005845 ORTHO05D007067 1.0e-28 130.2 120 59.2
QL07p030897 Quercus lobata HOM05D005845 ORTHO05D007067 1.0e-28 130.2 120 59.2
Atru.chr8.2014 Acer truncatum HOM05D005320 ORTHO05D007922 1.7e-28 129.4 126 57.9
DCAR_028759 Daucus carota HOM05D005845 ORTHO05D007067 1.7e-28 129.4 116 60.3
Duzib106G0947 Durio zibethinus HOM05D005845 ORTHO05D007067 1.7e-28 129.4 113 60.2
Lj1g0012131 Lotus japonicus HOM05D005845 ORTHO05D007067 1.7e-28 129.4 84 72.6
Manes.09G092274 Manihot esculenta HOM05D005845 ORTHO05D007067 1.7e-28 129.4 122 58.2
arahy.Tifrunner.gnm1.ann1.CX8U58 Arachis hypogaea HOM05D005845 ORTHO05D007067 2.3e-28 129.0 120 58.3
CAN.G597.2 Capsicum annuum HOM05D005845 ORTHO05D007067 2.3e-28 129.0 111 64.9
CSS0047206 Camellia sinensis var. sinensis HOM05D005845 ORTHO05D007067 2.9e-28 128.6 121 56.2
Eucgr.K03081 Eucalyptus grandis HOM05D005845 ORTHO05D007067 2.9e-28 128.6 94 66.0
Prupe.6G259200 Prunus persica HOM05D005845 ORTHO05D007067 3.8e-28 128.3 86 74.4
arahy.Tifrunner.gnm1.ann1.D19TT3 Arachis hypogaea HOM05D005845 ORTHO05D007067 5.0e-28 127.9 118 59.3
ClCG10G021330 Citrullus lanatus HOM05D005845 ORTHO05D007067 5.0e-28 127.9 82 75.6
Lj3A964T57 Lonicera japonica HOM05D005845 ORTHO05D007067 6.6e-28 127.5 81 72.8
FAN02G1947 Fragaria x ananassa HOM05D005845 ORTHO05D007067 8.6e-28 127.1 119 58.8
Gorai.009G405900 Gossypium raimondii HOM05D005845 ORTHO05D007067 8.6e-28 127.1 81 74.1
Medtr7g062970 Medicago truncatula HOM05D005845 ORTHO05D007067 8.6e-28 127.1 81 75.3
Sed0011119 Sechium edule HOM05D005845 ORTHO05D007067 8.6e-28 127.1 118 60.2
Cpa.g.sc3458.2 Carica papaya HOM05D005845 ORTHO05D007067 1.1e-27 126.7 115 56.5
FvH4_6g13240 Fragaria vesca HOM05D005845 ORTHO05D007067 1.1e-27 126.7 119 58.8
FAN14G4222 Fragaria x ananassa HOM05D005845 ORTHO05D007067 1.1e-27 126.7 119 58.8
MD12G1145500 Malus domestica HOM05D005845 ORTHO05D007067 1.1e-27 126.7 114 62.3
TWI77G0787 Tripterygium wilfordii HOM05D005845 ORTHO05D007067 1.1e-27 126.7 122 58.2
PGR004G0892 Punica granatum HOM05D005845 ORTHO05D007067 1.5e-27 126.3 80 71.2
Eucgr.K03092 Eucalyptus grandis HOM05D005845 ORTHO05D007067 1.9e-27 125.9 86 69.8
Sc01g0004490 Simmondsia chinensis HOM05D005845 ORTHO05D007067 1.9e-27 125.9 109 58.7
CANSAT35G1952 Cannabis sativa HOM05D005845 ORTHO05D007067 2.5e-27 125.6 76 80.3
Gohir.A07G012100 Gossypium hirsutum HOM05D005845 ORTHO05D007067 2.5e-27 125.6 81 74.1
Gohir.D07G011900 Gossypium hirsutum HOM05D005845 ORTHO05D007067 2.5e-27 125.6 81 74.1
Gorai.001G012600 Gossypium raimondii HOM05D005845 ORTHO05D007067 2.5e-27 125.6 81 74.1
arahy.Tifrunner.gnm1.ann1.1Q4DHH Arachis hypogaea HOM05D005845 ORTHO05D007067 4.3e-27 124.8 118 55.9
Ca_07339_v3 Cicer arietinum L. HOM05D005845 ORTHO05D007067 4.3e-27 124.8 81 76.5
Thecc.05G035600 Theobroma cacao HOM05D005845 ORTHO05D007067 5.6e-27 124.4 113 58.4
arahy.Tifrunner.gnm1.ann1.1BNP0N Arachis hypogaea HOM05D005845 ORTHO05D007067 7.3e-27 124.0 122 57.4
MD04G1132800 Malus domestica HOM05D005845 ORTHO05D007067 7.3e-27 124.0 113 59.3
Gohir.D04G102600 Gossypium hirsutum HOM05D005845 ORTHO05D007067 9.5e-27 123.6 81 72.8
PSO513G0176 Papaver somniferum HOM05D005845 ORTHO05D007067 1.2e-26 123.2 115 59.1
Os05g0292800 Oryza sativa ssp. japonica HOM05D005845 ORTHO05D007067 1.6e-26 122.9 114 57.9
AUR62018118 Chenopodium quinoa HOM05D005845 ORTHO05D007067 4.7e-26 121.3 76 76.3
SEGI_39626 Sequoiadendron giganteum HOM05D005845 ORTHO05D007067 4.7e-26 121.3 106 61.3
VMungo1383G2075 Vigna mungo HOM05D005845 ORTHO05D007067 4.7e-26 121.3 115 54.8
PSO339G6396 Papaver somniferum HOM05D005845 ORTHO05D007067 6.1e-26 120.9 115 60.0
Phvul.008G118000 Phaseolus vulgaris HOM05D005845 ORTHO05D007067 6.1e-26 120.9 115 54.8
TWI74G0153 Tripterygium wilfordii HOM05D005845 ORTHO05D007067 6.1e-26 120.9 120 55.8
Ciclev10013078m.g Citrus clementina HOM05D005845 ORTHO05D007067 8.0e-26 120.6 121 53.7
MBI05_g35632_MAGBIO Magnolia biondii HOM05D005845 ORTHO05D007067 1.0e-25 120.2 119 56.3
Sabra06G0067200 Salix brachista HOM05D000102 ORTHO05D004225 1.0e-25 120.2 112 57.1
Glyma.07G135300 Glycine max HOM05D005845 ORTHO05D007067 1.4e-25 119.8 104 60.6
ATR0559G337 Amborella trichopoda HOM05D005845 ORTHO05D007067 3.0e-25 118.6 71 78.9
AUR62034449 Chenopodium quinoa HOM05D005845 ORTHO05D007067 4.0e-25 118.2 76 76.3
Gohir.A04G065200 Gossypium hirsutum HOM05D005845 ORTHO05D007067 4.0e-25 118.2 84 70.2
Sp6g40320 Schrenkiella parvula HOM05D005845 ORTHO05D007067 5.2e-25 117.9 112 58.9
Zm00001eb299980 Zea mays HOM05D005845 ORTHO05D007067 5.2e-25 117.9 110 56.4
EL10Ac2g03022 Beta vulgaris HOM05D005845 ORTHO05D007067 8.9e-25 117.1 90 67.8
Carub.0006s0096 Capsella rubella HOM05D005845 ORTHO05D007067 8.9e-25 117.1 111 57.7
CARHR211240 Cardamine hirsuta HOM05D005845 ORTHO05D007067 8.9e-25 117.1 82 72.0
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 8.9e-25 117.1 82 68.3
CARHR083690 Cardamine hirsuta HOM05D005845 ORTHO05D007067 1.2e-24 116.7 117 54.7
Lalb_Chr01g0022631 Lupinus albus HOM05D005845 ORTHO05D007067 1.2e-24 116.7 85 68.2
Rhsim04G0158900 Rhododendron simsii HOM05D005845 ORTHO05D007067 1.5e-24 116.3 93 64.5
THA.LOC104816255 Tarenaya hassleriana HOM05D005845 ORTHO05D007067 1.5e-24 116.3 113 56.6
Aa31LG3G1810 Aethionema arabicum HOM05D005845 ORTHO05D007067 3.4e-24 115.2 114 54.4
AL6G11350 Arabidopsis lyrata HOM05D005845 ORTHO05D007067 3.4e-24 115.2 83 71.1
FAN05G4617 Fragaria x ananassa HOM05D005845 ORTHO05D007067 3.4e-24 115.2 119 55.5
Eucgr.G01508 Eucalyptus grandis HOM05D005845 ORTHO05D007067 5.7e-24 114.4 64 82.8
A03p00540 Brassica napus HOM05D005845 ORTHO05D007067 7.5e-24 114.0 114 57.0
BraA03t09444Z Brassica rapa HOM05D005845 ORTHO05D007067 7.5e-24 114.0 114 57.0
Sp3g07700 Schrenkiella parvula HOM05D005845 ORTHO05D007067 7.5e-24 114.0 118 57.6
AT5G02120 Arabidopsis thaliana HOM05D005845 ORTHO05D007067 9.8e-24 113.6 111 57.7
BcaC05g29521 Brassica carinata HOM05D005845 ORTHO05D007067 1.7e-23 112.8 71 76.1
MELO3C009241.2 Cucumis melo HOM05D005845 ORTHO05D007067 2.2e-23 112.5 113 52.2
Thhalv10015070m.g Eutrema salsugineum HOM05D005845 ORTHO05D007067 2.2e-23 112.5 113 59.3
BcaB01g06068 Brassica carinata HOM05D005845 ORTHO05D007067 2.9e-23 112.1 113 55.8
BcaC05g29660 Brassica carinata HOM05D005845 ORTHO05D007067 2.9e-23 112.1 71 76.1
C03p00800 Brassica napus HOM05D005845 ORTHO05D007067 2.9e-23 112.1 113 55.8
C05p58690 Brassica napus HOM05D005845 ORTHO05D007067 2.9e-23 112.1 71 76.1
BolC3t12643H Brassica oleracea HOM05D005845 ORTHO05D007067 2.9e-23 112.1 113 55.8
BolC5t34518H Brassica oleracea HOM05D005845 ORTHO05D007067 2.9e-23 112.1 71 76.1
BcaB01g06213 Brassica carinata HOM05D005845 ORTHO05D007067 4.9e-23 111.3 114 53.5
A05p39650 Brassica napus HOM05D005845 ORTHO05D007067 6.4e-23 110.9 71 76.1
BraA05t22747Z Brassica rapa HOM05D005845 ORTHO05D007067 6.4e-23 110.9 71 76.1
CDE06G2558 Ceratophyllum demersum HOM05D000816 ORTHO05D009154 1.1e-22 110.2 75 69.3
Carub.0003s0843 Capsella rubella HOM05D005845 ORTHO05D007067 1.8e-22 109.4 117 53.8
Os12g0480100 Oryza sativa ssp. japonica HOM05D005845 ORTHO05D007067 1.8e-22 109.4 71 67.6
AL3G20470 Arabidopsis lyrata HOM05D005845 ORTHO05D007067 2.4e-22 109.0 114 51.8
Eucgr.K03089 Eucalyptus grandis HOM05D005845 ORTHO05D007067 3.2e-22 108.6 71 71.8
Zm00001eb090340 Zea mays HOM05D005845 ORTHO05D007067 4.1e-22 108.2 64 78.1
Eucgr.K03094 Eucalyptus grandis HOM05D005845 ORTHO05D007067 1.6e-21 106.3 64 79.7
Dinv35574 Davidia involucrata HOM05D005845 ORTHO05D007067 7.8e-21 104.0 103 60.2
Actinidia11275 Actinidia chinensis HOM05D005845 ORTHO05D007067 2.3e-20 102.4 75 66.7
Mapoly0151s0005 Marchantia polymorpha HOM05D005845 ORTHO05D007067 4.3e-19 98.2 74 62.2
HPP92_019240 Vanilla planifolia HOM05D005845 ORTHO05D007067 4.3e-19 98.2 105 52.4
Oeu023072.1 Olea europaea HOM05D005845 ORTHO05D007067 5.6e-19 97.8 59 74.6
Pp3c18_21050 Physcomitrium patens HOM05D005845 ORTHO05D007067 1.6e-18 96.3 115 47.0
Pp3c22_8010 Physcomitrium patens HOM05D005845 ORTHO05D007067 3.6e-18 95.1 70 61.4
AagrBONN_evm.TU.Sc2ySwM_344.1593 Anthoceros agrestis HOM05D005845 ORTHO05D007067 6.2e-18 94.4 76 60.5
TAR369G0629 Trochodendron aralioides HOM05D005845 ORTHO05D007067 3.1e-17 92.0 58 74.1
Zm00001eb372120 Zea mays HOM05D005845 ORTHO05D007067 6.8e-17 90.9 54 77.8
SEGI_14936 Sequoiadendron giganteum HOM05D005845 ORTHO05D007067 1.5e-16 89.7 85 57.6
Eucgr.G00292 Eucalyptus grandis HOM05D005845 ORTHO05D007067 3.4e-16 88.6 49 83.7
TPR.G22204 Trifolium pratense HOM05D000026 ORTHO05D007067 2.2e-15 85.9 109 45.9
Eucgr.K03086 Eucalyptus grandis HOM05D005845 ORTHO05D007067 3.2e-14 82.0 61 65.6
CBR_g4596 Chara braunii HOM05D005845 ORTHO05D007067 7.0e-14 80.9 71 56.3
TPR.G34843 Trifolium pratense HOM05D005845 ORTHO05D007067 2.0e-13 79.3 47 76.6
Glyma.18G185300 Glycine max HOM05D005845 ORTHO05D007067 1.0e-12 77.0 84 48.8
Rhsim04G0160800 Rhododendron simsii HOM05D005845 ORTHO05D007067 6.2e-10 67.8 140 37.1
Cre02.g109950 Chlamydomonas reinhardtii HOM05D005845 ORTHO05D007067 4.9e-07 58.2 72 41.7


User provided reference genes

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