Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 7.9e-62 240.4 129 100.0
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 5.0e-56 221.1 129 91.5
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 3.6e-54 214.9 128 87.5
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 6.1e-54 214.2 129 88.4
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 7.9e-54 213.8 128 87.5
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 3.9e-53 211.5 126 87.3
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 3.9e-53 211.5 126 87.3
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 5.2e-53 211.1 128 85.2
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 6.7e-53 210.7 128 85.2
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 1.5e-52 209.5 128 84.4
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 2.0e-52 209.1 128 84.4
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 2.6e-52 208.8 129 85.3
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 3.3e-52 208.4 128 83.6
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 7.4e-52 207.2 128 84.4
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 7.4e-52 207.2 128 84.4
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 9.7e-52 206.8 128 84.4
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 1.3e-51 206.5 129 84.5
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 1.7e-51 206.1 128 83.6
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 2.8e-51 205.3 128 83.6
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 4.8e-51 204.5 129 83.7
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 4.8e-51 204.5 128 82.0
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 4.8e-51 204.5 128 83.6
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 6.3e-51 204.1 129 82.9
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 8.2e-51 203.8 129 82.2
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 8.2e-51 203.8 128 82.8
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 1.4e-50 203.0 128 82.8
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.8e-50 202.6 129 82.9
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.8e-50 202.6 129 82.9
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 3.1e-50 201.8 128 82.8
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 3.1e-50 201.8 127 81.9
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 3.1e-50 201.8 126 84.1
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 4.1e-50 201.4 129 81.4
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 5.3e-50 201.1 128 82.0
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 5.3e-50 201.1 128 82.0
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 9.1e-50 200.3 128 80.5
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 9.1e-50 200.3 128 79.7
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 1.2e-49 199.9 128 81.2
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 1.2e-49 199.9 128 81.2
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 1.6e-49 199.5 129 79.8
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 2.0e-49 199.1 128 79.7
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 2.6e-49 198.7 129 79.1
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 2.6e-49 198.7 129 80.6
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 3.5e-49 198.4 128 79.7
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 3.5e-49 198.4 128 79.7
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 4.5e-49 198.0 128 79.7
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 5.9e-49 197.6 129 79.8
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 5.9e-49 197.6 128 80.5
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 1.7e-48 196.1 128 78.1
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 2.2e-48 195.7 127 80.3
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 2.2e-48 195.7 128 80.5
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 5.0e-48 194.5 127 78.0
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 6.5e-48 194.1 129 79.1
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 6.5e-48 194.1 128 79.7
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 8.5e-48 193.7 135 78.5
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 1.1e-47 193.4 129 77.5
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 1.5e-47 193.0 128 78.1
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.9e-47 192.6 122 82.0
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 2.5e-47 192.2 131 78.6
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 2.5e-47 192.2 128 81.2
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 4.2e-47 191.4 125 78.4
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 4.2e-47 191.4 128 73.4
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 5.5e-47 191.0 119 84.0
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 5.5e-47 191.0 113 88.5
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.2e-46 189.9 127 75.6
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 3.6e-46 188.3 128 77.3
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 6.1e-46 187.6 128 75.8
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 1.0e-45 186.8 126 74.6
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 1.0e-45 186.8 128 75.0
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 1.0e-45 186.8 129 79.1
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.4e-45 186.4 130 76.2
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 2.3e-45 185.7 128 74.2
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 2.3e-45 185.7 128 75.0
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 2.3e-45 185.7 121 81.0
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 3.0e-45 185.3 128 74.2
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 4.0e-45 184.9 128 76.6
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 6.7e-45 184.1 128 74.2
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.2e-44 183.3 127 75.6
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.2e-44 183.3 129 73.6
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 2.0e-44 182.6 137 72.3
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 2.0e-44 182.6 129 73.6
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 3.3e-44 181.8 129 72.9
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 2.2e-43 179.1 129 75.2
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 2.8e-43 178.7 129 76.0
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 2.8e-43 178.7 128 72.7
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 3.7e-43 178.3 129 76.7
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 4.8e-43 177.9 129 75.2
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 4.8e-43 177.9 129 75.2
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 1.8e-42 176.0 129 69.8
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 2.4e-42 175.6 172 59.3
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 4.1e-42 174.9 119 78.2
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 5.3e-42 174.5 120 80.0
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 9.1e-42 173.7 121 74.4
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 6.5e-40 167.5 125 74.4
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 1.1e-39 166.8 104 83.7
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.5e-36 156.4 104 78.8
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 2.0e-36 156.0 116 73.3
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 2.6e-36 155.6 99 79.8
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 4.4e-36 154.8 186 52.7
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 4.4e-36 154.8 128 61.7
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 9.8e-36 153.7 128 60.9
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 7.0e-34 147.5 104 72.1
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 7.0e-34 147.5 96 79.2
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 4.2e-31 138.3 101 74.3
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 9.5e-31 137.1 92 78.3
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 1.8e-29 132.9 92 77.2
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 7.5e-28 127.5 94 74.5
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 6.3e-27 124.4 120 54.2
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 2.4e-26 122.5 92 73.9
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 1.2e-25 120.2 93 72.0
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 2.3e-24 115.9 109 65.1
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 3.8e-24 115.2 72 80.6
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 6.6e-24 114.4 99 55.6
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.8e-21 106.3 66 83.3
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 4.4e-20 101.7 62 82.3
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 7.5e-20 100.9 62 80.6
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 1.7e-19 99.8 62 80.6
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 4.9e-19 98.2 63 73.0
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 5.4e-18 94.7 64 76.6
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 9.2e-18 94.0 65 76.9
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 3.9e-16 88.6 62 69.4
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 1.9e-15 86.3 55 83.6
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 1.7e-11 73.2 117 33.3
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 7.0e-10 67.8 115 33.9
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 2.7e-09 65.9 61 54.1
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 3.0e-08 62.4 41 73.2
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 3.0e-08 62.4 38 78.9
Cre09.g405400 Chlamydomonas reinhardtii HOM05D006291 ORTHO05D007669 8.1e-06 54.3 119 26.9


User provided reference genes

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