Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 1.4e-190 669.5 352 100.0
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 3.7e-122 442.2 363 65.8
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 5.8e-115 418.3 372 62.1
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 2.0e-99 366.7 361 57.6
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 1.9e-97 360.1 358 56.1
Oeu036952.2 Olea europaea HOM05D005675 ORTHO05D006884 5.5e-89 332.0 465 46.7
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 1.7e-82 310.5 362 51.9
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 1.9e-81 307.0 366 49.7
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 2.5e-81 306.6 364 53.8
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 3.9e-79 299.3 372 48.1
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 6.7e-79 298.5 353 49.6
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 1.4e-76 290.8 368 48.1
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 3.1e-76 289.7 346 50.9
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 1.2e-75 287.7 360 47.2
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 2.0e-75 287.0 363 47.1
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 5.9e-75 285.4 360 46.9
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 7.7e-75 285.0 351 46.2
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 2.2e-74 283.5 353 49.6
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 5.0e-74 282.3 348 47.7
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 5.0e-74 282.3 408 45.6
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 1.1e-73 281.2 353 45.0
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 1.9e-73 280.4 365 46.6
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 1.9e-73 280.4 353 45.3
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 1.9e-73 280.4 353 48.7
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 4.2e-73 279.3 352 47.7
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 5.5e-73 278.9 359 47.1
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 7.2e-73 278.5 359 46.5
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 9.4e-73 278.1 362 46.1
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 6.1e-72 275.4 353 45.3
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 1.8e-71 273.9 360 45.0
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 2.0e-70 270.4 359 47.6
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 1.1e-68 264.6 352 44.0
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 3.1e-68 263.1 343 45.8
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 9.1e-68 261.5 345 46.4
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 3.4e-67 259.6 345 46.1
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 3.4e-67 259.6 335 48.1
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 5.9e-67 258.8 346 45.4
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 1.3e-66 257.7 343 46.1
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.1e-65 254.6 344 45.3
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 1.4e-65 254.2 329 47.1
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 1.9e-65 253.8 354 44.6
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 9.4e-65 251.5 355 43.9
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 1.2e-64 251.1 344 44.5
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 4.7e-64 249.2 344 43.9
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 7.9e-64 248.4 352 44.3
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 1.4e-63 247.7 324 48.1
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 1.4e-63 247.7 363 44.9
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 2.3e-63 246.9 309 48.2
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 3.9e-63 246.1 330 45.8
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 6.7e-63 245.4 346 44.2
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 6.7e-63 245.4 350 43.4
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 8.8e-63 245.0 359 43.5
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 1.1e-62 244.6 356 41.3
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 3.3e-62 243.0 337 45.7
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 4.4e-62 242.7 345 44.6
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 4.8e-61 239.2 344 45.3
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 4.8e-61 239.2 348 46.0
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 6.3e-61 238.8 317 45.1
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 8.2e-61 238.4 351 43.9
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 1.1e-60 238.0 342 41.8
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 5.3e-60 235.7 341 44.9
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 2.2e-58 230.3 355 42.5
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 3.8e-58 229.6 345 42.3
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 1.1e-57 228.0 342 41.5
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 3.2e-57 226.5 340 41.5
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 2.7e-56 223.4 344 40.1
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 2.7e-56 223.4 286 45.8
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 4.7e-56 222.6 344 41.0
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 8.0e-56 221.9 334 41.3
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 1.4e-55 221.1 347 40.6
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 2.3e-55 220.3 346 41.3
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 4.0e-55 219.5 345 39.7
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 8.8e-55 218.4 340 39.4
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 8.8e-55 218.4 346 40.8
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 2.0e-54 217.2 340 41.5
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 2.0e-54 217.2 348 39.7
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 1.3e-53 214.5 357 40.3
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 1.3e-53 214.5 339 41.0
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 1.7e-53 214.2 339 41.0
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 3.7e-53 213.0 340 40.3
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 6.3e-53 212.2 344 39.0
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 6.3e-53 212.2 279 46.2
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 1.8e-52 210.7 389 38.0
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 2.4e-52 210.3 339 40.1
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 3.1e-52 209.9 358 37.7
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 1.6e-51 207.6 339 38.9
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 2.0e-51 207.2 360 38.1
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 2.0e-51 207.2 341 39.0
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 2.7e-51 206.8 339 38.6
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 4.5e-51 206.1 352 38.6
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 5.0e-50 202.6 342 42.4
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 7.2e-49 198.7 336 39.6
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 2.3e-47 193.7 347 36.3
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 1.2e-46 191.4 363 34.2
SHI13641 Sapria himalayana HOM05D005675 ORTHO05D006884 1.5e-46 191.0 341 40.5
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 3.4e-46 189.9 200 52.0
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 3.4e-46 189.9 343 37.3
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 7.5e-46 188.7 343 37.9
Haze_19098 Corylus avellana HOM05D005675 ORTHO05D006884 7.5e-46 188.7 392 35.7
unitig_578.g16399 Utricularia gibba HOM05D005675 ORTHO05D006884 7.5e-46 188.7 224 51.8
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 2.0e-43 180.6 308 39.0
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 5.9e-43 179.1 353 37.7
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 1.3e-42 177.9 189 52.9
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 1.5e-41 174.5 320 35.9
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 5.5e-41 172.6 358 34.1
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.6e-40 171.0 272 41.5
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 2.1e-40 170.6 340 36.2
Sc26g0001420 Simmondsia chinensis HOM05D005675 ORTHO05D006884 3.6e-40 169.9 318 37.4
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 4.0e-39 166.4 272 41.9
Sopen12g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 1.2e-38 164.9 217 47.5
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 2.6e-38 163.7 277 39.0
FvH4_6g26940 Fragaria vesca HOM05D005675 ORTHO05D006884 1.3e-37 161.4 251 39.0
CSS0020115 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 2.0e-35 154.1 212 44.8
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 3.5e-35 153.3 304 36.8
CARHR085110 Cardamine hirsuta HOM05D005675 ORTHO05D006884 1.7e-29 134.4 246 35.8
Peaxi162Scf01527g00006 Petunia axillaris HOM05D005675 ORTHO05D006884 7.0e-28 129.0 216 41.7
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 1.5e-25 121.3 299 32.1
unitig_578.g16398 Utricularia gibba HOM05D005675 ORTHO05D006884 1.2e-24 118.2 96 58.3
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 4.4e-22 109.8 120 48.3
Mapoly0082s0059 Marchantia polymorpha HOM05D005675 ORTHO05D006884 1.3e-21 108.2 405 27.9
PGSC0003DMG400009563 Solanum tuberosum HOM05D005675 ORTHO05D006884 1.7e-21 107.8 172 43.6
PSO170G0789 Papaver somniferum HOM05D005675 ORTHO05D006884 4.1e-20 103.2 267 33.7
PSO170G4889 Papaver somniferum HOM05D005675 ORTHO05D006884 4.1e-20 103.2 267 33.7
PSO170G5374 Papaver somniferum HOM05D005675 ORTHO05D006884 4.1e-20 103.2 267 33.7
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 7.0e-20 102.4 125 46.4
CARHR085100 Cardamine hirsuta HOM05D005675 ORTHO05D006884 1.2e-19 101.7 99 58.6
PSO431G0001 Papaver somniferum HOM05D005675 ORTHO05D006884 2.7e-19 100.5 228 35.1
Sopen12g008240 Solanum pennellii HOM05D005675 ORTHO05D006884 1.3e-18 98.2 94 57.4
CAN.G2070.2 Capsicum annuum HOM05D005675 ORTHO05D006884 3.9e-18 96.7 163 40.5
PSO170G3345 Papaver somniferum HOM05D005675 ORTHO05D006884 2.1e-16 90.9 256 32.4
Pp3c9_5270 Physcomitrium patens HOM05D005675 ORTHO05D006884 2.1e-16 90.9 391 27.9
AagrBONN_evm.TU.Sc2ySwM_228.2452 Anthoceros agrestis HOM05D034800 ORTHO05D006884 2.3e-10 70.9 226 26.1
AagrBONN_evm.TU.Sc2ySwM_344.4450 Anthoceros agrestis HOM05D034800 ORTHO05D006884 7.3e-09 65.9 384 22.9
SMO367G0141 Selaginella moellendorffii HOM05D005675 ORTHO05D006884 7.3e-09 65.9 271 25.1
CSS0044900 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 1.4e-07 61.6 77 48.1
Gorai.004G024600 Gossypium raimondii HOM05D005675 ORTHO05D006884 4.0e-07 60.1 59 49.2
Gohir.D08G027550 Gossypium hirsutum HOM05D005675 ORTHO05D006884 6.8e-07 59.3 59 49.2
Sopen00g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 9.9e-06 55.5 42 64.3


User provided reference genes

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