Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01893 Erythranthe guttata HOM05D004638 ORTHO05D005443 8.4e-151 537.3 327 100.0
SGA_v2.0_scaffold21G09643 Striga asiatica HOM05D004638 ORTHO05D005443 1.2e-91 340.9 329 64.7
SalBow5G3921 Salvia bowleyana HOM05D004638 ORTHO05D005443 4.4e-91 339.0 324 64.5
SGA_v2.0_scaffold41G15829 Striga asiatica HOM05D004638 ORTHO05D005443 2.4e-89 333.2 326 64.1
MSTRG.13923 Avicennia marina HOM05D004638 ORTHO05D005443 7.3e-86 321.6 335 63.6
MSTRG.26536 Avicennia marina HOM05D004638 ORTHO05D005443 7.3e-86 321.6 335 63.6
Oeu017919.1 Olea europaea HOM05D004638 ORTHO05D005443 1.0e-79 301.2 347 55.3
Solyc02g082130.2 Solanum lycopersicum HOM05D004638 ORTHO05D005443 1.8e-68 263.8 343 54.5
Sopen02g026790 Solanum pennellii HOM05D004638 ORTHO05D005443 1.8e-68 263.8 342 54.4
PGSC0003DMG400013656 Solanum tuberosum HOM05D004638 ORTHO05D005443 8.9e-68 261.5 331 53.5
Peaxi162Scf00048g00171 Petunia axillaris HOM05D004638 ORTHO05D005443 1.3e-66 257.7 344 50.9
Nitab4.5_0001815g0110 Nicotiana tabacum HOM05D004638 ORTHO05D005443 4.1e-65 252.7 343 51.0
RcHm_v2.0_Chr4g0395981 Rosa chinensis HOM05D004638 ORTHO05D005443 7.3e-62 241.9 332 50.0
Duzib052G1194 Durio zibethinus HOM05D004638 ORTHO05D005443 1.2e-61 241.1 332 48.2
Thecc.04G268000 Theobroma cacao HOM05D004638 ORTHO05D005443 2.1e-61 240.4 330 49.1
Nitab4.5_0000614g0010 Nicotiana tabacum HOM05D004638 ORTHO05D005443 3.6e-61 239.6 338 50.3
FAN15G0747 Fragaria x ananassa HOM05D004638 ORTHO05D005443 4.7e-61 239.2 337 50.1
FvH4_4g05060 Fragaria vesca HOM05D004638 ORTHO05D005443 1.1e-60 238.0 332 50.3
FAN12G0885 Fragaria x ananassa HOM05D004638 ORTHO05D005443 1.1e-60 238.0 332 50.3
FvH4_2g18960 Fragaria vesca HOM05D004638 ORTHO05D005443 1.8e-60 237.3 332 47.6
THA.LOC104800549 Tarenaya hassleriana HOM05D004638 ORTHO05D005443 1.8e-60 237.3 341 48.4
FAN24G1523 Fragaria x ananassa HOM05D004638 ORTHO05D005443 2.4e-60 236.9 332 47.3
Duzib212G0972 Durio zibethinus HOM05D004638 ORTHO05D005443 3.1e-60 236.5 334 47.6
Gohir.D09G231600 Gossypium hirsutum HOM05D004638 ORTHO05D005443 3.1e-60 236.5 335 46.6
Gorai.006G254300 Gossypium raimondii HOM05D004638 ORTHO05D005443 3.1e-60 236.5 335 46.6
Aa31LG11G6060 Aethionema arabicum HOM05D004638 ORTHO05D005443 5.2e-60 235.7 336 46.7
FAN17G1367 Fragaria x ananassa HOM05D004638 ORTHO05D005443 6.8e-60 235.3 332 46.7
Gohir.A09G230500 Gossypium hirsutum HOM05D004638 ORTHO05D005443 3.4e-59 233.0 351 44.7
COL.COLO4_15993 Corchorus olitorius HOM05D004638 ORTHO05D005443 4.4e-59 232.6 333 49.5
CAN.G809.17 Capsicum annuum HOM05D004638 ORTHO05D005443 1.3e-58 231.1 334 52.1
TWI53G1292 Tripterygium wilfordii HOM05D004638 ORTHO05D005443 1.7e-58 230.7 326 47.9
Prupe.1G051000 Prunus persica HOM05D004638 ORTHO05D005443 3.8e-58 229.6 333 49.2
Ah.16g102130 Amaranthus hybridus HOM05D004638 ORTHO05D005443 4.9e-58 229.2 328 47.9
ClCG06G018050 Citrullus lanatus HOM05D004638 ORTHO05D005443 4.9e-58 229.2 331 46.8
Haze_15400 Corylus avellana HOM05D004638 ORTHO05D005443 6.4e-58 228.8 331 49.8
Haze_15402 Corylus avellana HOM05D004638 ORTHO05D005443 6.4e-58 228.8 331 49.8
FAN22G0870 Fragaria x ananassa HOM05D004638 ORTHO05D005443 6.4e-58 228.8 334 47.3
QL06p021792 Quercus lobata HOM05D004638 ORTHO05D005443 6.4e-58 228.8 328 46.3
CiPaw.01G176300 Carya illinoinensis HOM05D004638 ORTHO05D005443 8.4e-58 228.4 333 47.1
Atru.chr4.1922 Acer truncatum HOM05D004638 ORTHO05D005443 2.4e-57 226.9 335 48.7
Glyma.19G074500 Glycine max HOM05D004638 ORTHO05D005443 3.2e-57 226.5 344 44.8
MD16G1229100 Malus domestica HOM05D004638 ORTHO05D005443 3.2e-57 226.5 341 46.6
ECA246G4403 Erigeron canadensis HOM05D004638 ORTHO05D005443 7.1e-57 225.3 335 47.8
VMungo1215G0894 Vigna mungo HOM05D004638 ORTHO05D005443 7.1e-57 225.3 332 49.7
PGR142G1578 Punica granatum HOM05D004638 ORTHO05D005443 1.2e-56 224.6 329 45.0
Dinv31214 Davidia involucrata HOM05D001005 ORTHO05D000836 1.6e-56 224.2 322 48.8
HanXRQChr11g0320631 Helianthus annuus HOM05D004638 ORTHO05D005443 2.1e-56 223.8 339 54.9
Lj2C17T3 Lonicera japonica HOM05D004638 ORTHO05D005443 2.7e-56 223.4 335 47.5
Lsat_1_v5_gn_9_30280 Lactuca sativa HOM05D004638 ORTHO05D005443 4.6e-56 222.6 339 55.2
DCAR_007662 Daucus carota HOM05D004638 ORTHO05D005443 6.0e-56 222.2 321 46.4
Sed0011634 Sechium edule HOM05D004638 ORTHO05D005443 6.0e-56 222.2 332 46.4
Thhalv10013953m.g Eutrema salsugineum HOM05D004638 ORTHO05D005443 1.0e-55 221.5 341 43.1
Cfa014805 Carpinus fangiana HOM05D004638 ORTHO05D005443 5.1e-55 219.2 331 44.7
HPP92_027401 Vanilla planifolia HOM05D004638 ORTHO05D005443 6.6e-55 218.8 345 44.6
Rhsim09G0102800 Rhododendron simsii HOM05D003876 ORTHO05D005443 8.7e-55 218.4 336 46.7
Potri.010G064100 Populus trichocarpa HOM05D004638 ORTHO05D005443 1.1e-54 218.0 327 46.8
Sp6g37620 Schrenkiella parvula HOM05D004638 ORTHO05D005443 1.1e-54 218.0 337 42.4
TAR623G0129 Trochodendron aralioides HOM05D004638 ORTHO05D005443 1.5e-54 217.6 324 43.2
Eucgr.H01383 Eucalyptus grandis HOM05D004638 ORTHO05D005443 1.9e-54 217.2 328 44.2
Psat2g177000 Pisum sativum HOM05D004638 ORTHO05D005443 2.5e-54 216.9 339 49.0
Hma1.2p1_0751F.1_g212710 Hydrangea macrophylla HOM05D004638 ORTHO05D005443 5.6e-54 215.7 338 43.8
HanXRQChr14g0438771 Helianthus annuus HOM05D004638 ORTHO05D005443 9.6e-54 214.9 339 54.0
GSVIVG01027946001 Vitis vinifera HOM05D004638 ORTHO05D005443 2.8e-53 213.4 328 45.1
CsaV3_1G000420 Cucumis sativus L. HOM05D004638 ORTHO05D005443 3.6e-53 213.0 329 44.7
Phvul.003G100800 Phaseolus vulgaris HOM05D004638 ORTHO05D005443 3.6e-53 213.0 329 45.6
BraA02t04837Z Brassica rapa HOM05D004638 ORTHO05D005443 4.7e-53 212.6 329 43.5
Ciclev10025979m.g Citrus clementina HOM05D004638 ORTHO05D005443 4.7e-53 212.6 332 47.3
MELO3C026193.2 Cucumis melo HOM05D004638 ORTHO05D005443 4.7e-53 212.6 329 44.1
ClCG06G007330 Citrullus lanatus HOM05D004638 ORTHO05D005443 1.4e-52 211.1 330 46.1
BcaB01g05944 Brassica carinata HOM05D004638 ORTHO05D005443 1.8e-52 210.7 336 43.2
CANSAT01G0932 Cannabis sativa HOM05D004638 ORTHO05D005443 2.4e-52 210.3 336 45.5
CANSAT01G3035 Cannabis sativa HOM05D004638 ORTHO05D005443 2.4e-52 210.3 336 45.5
AL6G15050 Arabidopsis lyrata HOM05D004638 ORTHO05D005443 3.1e-52 209.9 356 41.0
Aqoxy5G00949 Aquilegia oxysepala HOM05D004638 ORTHO05D005443 4.0e-52 209.5 351 45.3
TWI73G0168 Tripterygium wilfordii HOM05D004638 ORTHO05D005443 4.0e-52 209.5 337 46.9
Carub.0006s0414 Capsella rubella HOM05D004638 ORTHO05D005443 5.3e-52 209.1 350 41.1
MELO3C023050.2 Cucumis melo HOM05D004638 ORTHO05D005443 6.9e-52 208.8 331 45.6
BcaC03g13151 Brassica carinata HOM05D004638 ORTHO05D005443 9.0e-52 208.4 334 44.6
BolC2t06190H Brassica oleracea HOM05D004638 ORTHO05D005443 9.0e-52 208.4 334 44.6
BcaB05g21727 Brassica carinata HOM05D004638 ORTHO05D005443 1.2e-51 208.0 329 41.9
C02p02210 Brassica napus HOM05D004638 ORTHO05D005443 1.2e-51 208.0 330 42.7
C03p02590 Brassica napus HOM05D004638 ORTHO05D005443 1.2e-51 208.0 335 42.4
Manes.15G046900 Manihot esculenta HOM05D004638 ORTHO05D005443 2.6e-51 206.8 329 46.8
Medtr5g012820 Medicago truncatula HOM05D004638 ORTHO05D005443 2.6e-51 206.8 337 45.1
CsaV3_2G012340 Cucumis sativus L. HOM05D004638 ORTHO05D005443 4.4e-51 206.1 331 45.3
Lalb_Chr11g0063191 Lupinus albus HOM05D004638 ORTHO05D005443 9.9e-51 204.9 331 48.0
BcaB01g05717 Brassica carinata HOM05D004638 ORTHO05D005443 3.8e-50 203.0 336 41.7
A03p02250 Brassica napus HOM05D004638 ORTHO05D005443 6.4e-50 202.2 338 42.0
BraA03t09589Z Brassica rapa HOM05D004638 ORTHO05D005443 6.4e-50 202.2 338 42.0
BolC3t12811H Brassica oleracea HOM05D004638 ORTHO05D005443 1.9e-49 200.7 348 40.2
Cpa.g.c29962.1 Carica papaya HOM05D004638 ORTHO05D005443 2.4e-49 200.3 330 43.3
CARHR208030 Cardamine hirsuta HOM05D004638 ORTHO05D005443 7.1e-49 198.7 319 42.3
Atru.chr2.74 Acer truncatum HOM05D004638 ORTHO05D005443 1.2e-48 198.0 322 45.3
Ca_03509_v3 Cicer arietinum L. HOM05D004638 ORTHO05D005443 1.2e-48 198.0 341 46.0
Haze_11486 Corylus avellana HOM05D004638 ORTHO05D005443 1.6e-48 197.6 331 43.2
TPR.G18128 Trifolium pratense HOM05D004638 ORTHO05D005443 2.1e-48 197.2 368 45.1
Glyma.05G075900 Glycine max HOM05D004638 ORTHO05D005443 3.5e-48 196.4 333 44.7
TPR.G7963 Trifolium pratense HOM05D004638 ORTHO05D005443 6.0e-48 195.7 322 40.4
Cc04_g09510 Coffea canephora HOM05D004638 ORTHO05D005443 7.8e-48 195.3 345 42.0
Sabra10G0042900 Salix brachista HOM05D004638 ORTHO05D005443 2.3e-47 193.7 329 44.1
EL10Ac2g04652 Beta vulgaris HOM05D004638 ORTHO05D005443 5.1e-47 192.6 330 41.5
CiPaw.02G105500 Carya illinoinensis HOM05D004638 ORTHO05D005443 1.5e-46 191.0 326 46.3
arahy.Tifrunner.gnm1.ann1.L9DXTM Arachis hypogaea HOM05D004638 ORTHO05D005443 2.5e-46 190.3 335 45.7
AT5G05210 Arabidopsis thaliana HOM05D004638 ORTHO05D005443 1.3e-45 188.0 361 37.7
ATR0051G063 Amborella trichopoda HOM05D004638 ORTHO05D005443 6.2e-45 185.7 330 44.2
Lalb_Chr08g0244981 Lupinus albus HOM05D004638 ORTHO05D005443 1.4e-44 184.5 328 45.4
Potri.008G173300 Populus trichocarpa HOM05D004638 ORTHO05D005443 2.6e-43 180.3 327 42.5
Sc06g0001700 Simmondsia chinensis HOM05D004638 ORTHO05D005443 1.6e-40 171.0 356 37.6
Mapoly0122s0042 Marchantia polymorpha HOM05D004638 ORTHO05D005443 3.9e-39 166.4 353 35.1
Zm00001eb248040 Zea mays HOM05D004638 ORTHO05D005443 2.5e-38 163.7 363 38.3
CDE06G2325 Ceratophyllum demersum HOM05D004638 ORTHO05D005443 3.7e-37 159.8 314 39.2
Oeu016931.1 Olea europaea HOM05D004638 ORTHO05D005443 4.8e-37 159.5 238 48.7
Lj4g0009002 Lotus japonicus HOM05D004638 ORTHO05D005443 2.0e-35 154.1 329 35.6
CDE07G1349 Ceratophyllum demersum HOM05D002308 ORTHO05D005297 7.6e-35 152.1 295 37.3
COL.COLO4_32263 Corchorus olitorius HOM05D004638 ORTHO05D005443 2.2e-34 150.6 331 42.9
Carub.0004s0850 Capsella rubella HOM05D004638 ORTHO05D005443 1.9e-33 147.5 316 36.7
CSS0022021 Camellia sinensis var. sinensis HOM05D004638 ORTHO05D005443 2.5e-33 147.1 273 49.1
MD13G1224300 Malus domestica HOM05D004638 ORTHO05D005443 9.3e-33 145.2 278 40.6
Os05g0372200 Oryza sativa ssp. japonica HOM05D004638 ORTHO05D005443 3.7e-29 133.3 353 39.9
Actinidia22435 Actinidia chinensis HOM05D004638 ORTHO05D005443 5.8e-27 125.9 125 56.0
SMO119G0466 Selaginella moellendorffii HOM05D004638 ORTHO05D005443 5.8e-27 125.9 335 32.5
AagrBONN_evm.TU.Sc2ySwM_368.887 Anthoceros agrestis HOM05D004638 ORTHO05D005443 3.8e-26 123.2 315 33.0
SEGI_31736 Sequoiadendron giganteum HOM05D004638 ORTHO05D005443 6.5e-26 122.5 340 32.1
unitig_22.g5966 Utricularia gibba HOM05D004638 ORTHO05D005443 1.1e-25 121.7 150 52.7
AL4G22550 Arabidopsis lyrata HOM05D004638 ORTHO05D005443 7.1e-25 119.0 292 34.2
Pp3c8_4010 Physcomitrium patens HOM05D004638 ORTHO05D005443 9.3e-25 118.6 340 33.5
arahy.Tifrunner.gnm1.ann1.XHZZ6B Arachis hypogaea HOM05D004638 ORTHO05D005443 2.1e-24 117.5 317 35.0
unitig_22.g5967 Utricularia gibba HOM05D004638 ORTHO05D005443 1.0e-23 115.2 94 66.0
Nn4g24624 Nelumbo nucifera HOM05D004638 ORTHO05D005443 3.9e-23 113.2 209 40.7
Actinidia06751 Actinidia chinensis HOM05D004638 ORTHO05D005443 9.7e-22 108.6 246 39.4
AUR62014564 Chenopodium quinoa HOM05D004638 ORTHO05D005443 1.3e-21 108.2 329 31.0
Medtr2g079000 Medicago truncatula HOM05D004638 ORTHO05D005443 2.2e-21 107.5 284 32.0
AT2G27750 Arabidopsis thaliana HOM05D004638 ORTHO05D005443 4.8e-21 106.3 186 39.8
HanXRQChr11g0320651 Helianthus annuus HOM05D004638 ORTHO05D005443 5.0e-18 96.3 169 46.7
AUR62039396 Chenopodium quinoa HOM05D004638 ORTHO05D005443 1.9e-17 94.4 99 52.5
CBR_g30748 Chara braunii HOM05D003542 ORTHO05D004799 5.1e-15 86.3 431 26.5
Nitab4.5_0000047g0220 Nicotiana tabacum HOM05D004638 ORTHO05D005443 1.1e-12 78.6 94 48.9
arahy.Tifrunner.gnm1.ann1.EFW0VL Arachis hypogaea HOM05D004638 ORTHO05D005443 1.8e-12 77.8 128 41.4
MCO04G484 Micromonas commoda HOM05D004638 ORTHO05D005443 2.4e-12 77.4 330 27.0
Atru.chr4.1888 Acer truncatum HOM05D004638 ORTHO05D005443 9.1e-12 75.5 127 38.6
AUR62039395 Chenopodium quinoa HOM05D004638 ORTHO05D005443 1.7e-10 71.2 74 47.3
Lj3g0004611 Lotus japonicus HOM05D004638 ORTHO05D005443 8.5e-10 68.9 242 31.4
MSTRG.10449 Avicennia marina HOM05D004638 ORTHO05D005443 1.9e-09 67.8 95 54.7
Actinidia16422 Actinidia chinensis HOM05D004638 ORTHO05D005443 5.5e-09 66.2 89 43.8
Nitab4.5_0000047g0240 Nicotiana tabacum HOM05D004638 ORTHO05D005443 5.5e-09 66.2 72 52.8
Manes.12G121700 Manihot esculenta HOM05D004638 ORTHO05D005443 6.7e-07 59.3 189 37.0
Nitab4.5_0000047g0210 Nicotiana tabacum HOM05D004638 ORTHO05D005443 2.0e-06 57.8 95 40.0


User provided reference genes

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