Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 6.5e-175 617.5 349 100.0
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 9.9e-83 311.2 481 46.8
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 2.5e-70 270.0 489 43.6
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 7.6e-59 231.9 424 44.6
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 1.3e-53 214.5 403 40.2
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 1.2e-51 208.0 379 42.0
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 7.6e-51 205.3 408 40.9
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 1.3e-50 204.5 413 38.0
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 6.5e-50 202.2 401 37.4
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 1.1e-49 201.4 396 37.1
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 3.2e-49 199.9 434 36.2
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 7.9e-48 195.3 383 39.2
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 7.9e-48 195.3 392 37.0
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.0e-47 194.9 384 38.3
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 2.3e-47 193.7 477 34.8
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 8.7e-47 191.8 341 44.6
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 8.7e-47 191.8 361 41.6
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 1.1e-46 191.4 386 38.9
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 2.5e-46 190.3 419 37.0
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 3.3e-46 189.9 383 38.6
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 4.3e-46 189.5 384 37.2
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 1.1e-44 184.9 440 36.1
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 1.8e-44 184.1 520 33.3
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 9.1e-44 181.8 423 35.9
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 1.5e-43 181.0 165 63.0
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 2.6e-43 180.3 220 50.9
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 7.7e-43 178.7 341 44.0
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 1.0e-42 178.3 391 40.9
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 2.2e-42 177.2 411 36.0
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 6.5e-42 175.6 418 35.4
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 6.5e-42 175.6 481 34.5
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 8.5e-42 175.3 349 38.4
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 1.1e-41 174.9 239 50.6
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 1.1e-41 174.9 396 36.4
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 1.1e-41 174.9 387 41.9
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 1.4e-41 174.5 425 39.1
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 1.9e-41 174.1 265 47.2
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 1.9e-41 174.1 469 33.0
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 2.5e-41 173.7 400 36.2
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 3.2e-41 173.3 420 36.7
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 4.2e-41 172.9 271 45.8
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 4.2e-41 172.9 435 35.4
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 9.4e-41 171.8 358 38.5
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 2.7e-40 170.2 198 56.1
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 2.7e-40 170.2 472 33.9
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 4.7e-40 169.5 424 38.4
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 6.1e-40 169.1 388 37.6
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 7.9e-40 168.7 330 43.0
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 7.9e-40 168.7 437 35.0
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 1.0e-39 168.3 354 38.7
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 1.0e-39 168.3 328 37.2
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 1.8e-39 167.5 481 32.6
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 3.0e-39 166.8 375 38.1
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 3.0e-39 166.8 247 49.0
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 3.9e-39 166.4 432 34.0
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 3.9e-39 166.4 403 38.0
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 8.8e-39 165.2 362 44.5
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 1.1e-38 164.9 469 32.4
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 3.3e-38 163.3 405 38.5
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 4.4e-38 162.9 418 32.5
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 9.7e-38 161.8 474 32.3
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 1.7e-37 161.0 468 34.6
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 2.8e-37 160.2 366 38.5
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 2.8e-37 160.2 122 69.7
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 3.7e-37 159.8 286 43.7
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 6.3e-37 159.1 431 34.8
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 6.3e-37 159.1 87 88.5
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 8.2e-37 158.7 418 35.6
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 1.2e-35 154.8 457 32.4
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 1.2e-35 154.8 423 36.4
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 1.5e-35 154.5 380 35.3
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 3.4e-35 153.3 389 40.6
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 3.4e-35 153.3 478 31.8
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 3.4e-35 153.3 481 32.2
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 7.7e-35 152.1 286 41.3
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 7.7e-35 152.1 101 74.3
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 7.7e-35 152.1 389 40.1
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 7.7e-35 152.1 295 40.0
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 1.0e-34 151.8 351 43.3
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 2.9e-34 150.2 489 33.5
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 2.5e-33 147.1 339 39.2
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 4.2e-33 146.4 335 40.0
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 4.2e-33 146.4 335 40.0
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 4.2e-33 146.4 401 34.2
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 7.2e-33 145.6 370 38.9
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 2.1e-32 144.1 424 33.5
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 2.7e-32 143.7 378 38.4
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 2.7e-32 143.7 194 49.5
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 2.7e-32 143.7 460 32.4
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 3.6e-32 143.3 240 44.2
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 4.7e-32 142.9 425 32.2
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 4.7e-32 142.9 373 39.1
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 4.7e-32 142.9 373 39.1
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 4.7e-32 142.9 373 39.1
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 8.0e-32 142.1 354 36.7
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 1.0e-31 141.7 173 50.3
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 3.0e-31 140.2 301 38.2
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 3.9e-31 139.8 125 60.8
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 8.8e-31 138.7 416 33.4
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 5.7e-30 136.0 326 38.3
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 2.8e-29 133.7 365 38.4
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 6.3e-29 132.5 240 42.9
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 4.1e-28 129.8 241 41.1
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 7.0e-28 129.0 360 38.3
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 7.0e-28 129.0 275 38.2
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 2.0e-27 127.5 148 52.7
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 2.0e-27 127.5 148 52.7
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 6.5e-26 122.5 323 39.3
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 7.2e-25 119.0 87 66.7
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 9.4e-25 118.6 316 38.6
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 2.7e-24 117.1 114 52.6
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 2.3e-23 114.0 324 39.8
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 5.2e-23 112.8 260 38.5
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-22 111.3 76 69.7
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 2.2e-21 107.5 554 26.9
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 1.6e-19 101.3 227 37.0
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 2.7e-19 100.5 62 77.4
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis HOM05D005890 ORTHO05D006717 5.9e-19 99.4 259 33.6
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 5.5e-17 92.8 184 42.4
FvH4_4g06950 Fragaria vesca HOM05D005890 ORTHO05D006717 3.6e-16 90.1 327 30.6
DCAR_029041 Daucus carota HOM05D005890 ORTHO05D006717 2.3e-15 87.4 278 34.2
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 6.8e-15 85.9 318 36.2
Gohir.D04G007200 Gossypium hirsutum HOM05D005890 ORTHO05D006717 1.5e-14 84.7 349 33.0
MD13G1240600 Malus domestica HOM05D005890 ORTHO05D006717 1.7e-13 81.3 433 27.5
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 2.8e-13 80.5 199 35.2
Cre01.g055400 Chlamydomonas reinhardtii HOM05D005890 ORTHO05D006717 1.1e-12 78.6 80 60.0
Sabra18G0114500 Salix brachista HOM05D005890 ORTHO05D006717 5.4e-12 76.3 203 42.9
Zm00001eb394450 Zea mays HOM05D014690 ORTHO05D006717 7.7e-11 72.4 55 63.6
MCO09G065 Micromonas commoda HOM05D005890 ORTHO05D006717 5.0e-10 69.7 80 57.5
CiPaw.08G031700 Carya illinoinensis HOM05D005890 ORTHO05D006717 2.8e-08 63.9 187 31.6
A10p14440 Brassica napus HOM05D005890 ORTHO05D006717 4.7e-08 63.2 34 82.4
BraA10t43535Z Brassica rapa HOM05D005890 ORTHO05D006717 4.7e-08 63.2 34 82.4
MBI14_g15781_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 3.4e-06 57.0 148 27.7
DCAR_001127 Daucus carota HOM05D000703 ORTHO05D006717 7.5e-06 55.8 63 49.2


User provided reference genes

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