Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01845 Erythranthe guttata HOM05D005113 ORTHO05D006045 2.6e-56 221.9 113 100.0
Migut.J00732 Erythranthe guttata HOM05D005113 ORTHO05D006045 1.7e-28 129.4 112 67.0
MSTRG.26588 Avicennia marina HOM05D005113 ORTHO05D006045 1.5e-27 126.3 115 62.6
Oeu020160.1 Olea europaea HOM05D005113 ORTHO05D006045 5.2e-25 117.9 111 55.0
Oeu044708.1 Olea europaea HOM05D005113 ORTHO05D006045 1.2e-24 116.7 108 63.0
Oeu045023.1 Olea europaea HOM05D005113 ORTHO05D006045 1.7e-23 112.8 106 57.5
Dinv25078 Davidia involucrata HOM05D005113 ORTHO05D006045 3.7e-23 111.7 119 52.9
Dinv11892 Davidia involucrata HOM05D005113 ORTHO05D006045 7.8e-21 104.0 121 51.2
Actinidia07952 Actinidia chinensis HOM05D005113 ORTHO05D006045 2.3e-20 102.4 112 55.4
TAR633G2365 Trochodendron aralioides HOM05D005113 ORTHO05D006045 4.3e-19 98.2 122 51.6
Cpa.g.sc222.18 Carica papaya HOM05D005113 ORTHO05D006045 7.3e-19 97.4 117 46.2
Actinidia06192 Actinidia chinensis HOM05D005113 ORTHO05D006045 2.1e-18 95.9 111 55.0
Manes.08G036800 Manihot esculenta HOM05D005113 ORTHO05D006045 6.2e-18 94.4 116 50.9
CSS0024187 Camellia sinensis var. sinensis HOM05D005113 ORTHO05D006045 1.5e-16 89.7 108 50.0
Cc06_g06930 Coffea canephora HOM05D005113 ORTHO05D006045 1.5e-16 89.7 115 49.6
Peaxi162Scf00203g00418 Petunia axillaris HOM05D005113 ORTHO05D006045 3.4e-16 88.6 113 47.8
RcHm_v2.0_Chr3g0477281 Rosa chinensis HOM05D005113 ORTHO05D006045 4.4e-16 88.2 124 45.2
PGSC0003DMG400021340 Solanum tuberosum HOM05D005113 ORTHO05D006045 5.8e-16 87.8 110 47.3
Aqoxy1G00593 Aquilegia oxysepala HOM05D005113 ORTHO05D006045 7.5e-16 87.4 120 45.8
ECA238G1367 Erigeron canadensis HOM05D005113 ORTHO05D006045 9.8e-16 87.0 107 48.6
Solyc01g006760.3 Solanum lycopersicum HOM05D005113 ORTHO05D006045 9.8e-16 87.0 110 46.4
Duzib106G0847 Durio zibethinus HOM05D005113 ORTHO05D006045 1.3e-15 86.7 120 45.8
FvH4_6g20940 Fragaria vesca HOM05D005113 ORTHO05D006045 1.3e-15 86.7 124 45.2
FAN14G1795 Fragaria x ananassa HOM05D005113 ORTHO05D006045 1.3e-15 86.7 124 45.2
FAN09G1514 Fragaria x ananassa HOM05D005113 ORTHO05D006045 2.2e-15 85.9 124 45.2
Lsat_1_v5_gn_2_101981 Lactuca sativa HOM05D005113 ORTHO05D006045 2.9e-15 85.5 109 50.5
Nn1g06541 Nelumbo nucifera HOM05D005113 ORTHO05D006045 2.9e-15 85.5 120 42.5
Nn2g14410 Nelumbo nucifera HOM05D005113 ORTHO05D006045 2.9e-15 85.5 122 43.4
Nitab4.5_0000721g0120 Nicotiana tabacum HOM05D005113 ORTHO05D006045 2.9e-15 85.5 115 47.0
Sopen01g002760 Solanum pennellii HOM05D005113 ORTHO05D006045 2.9e-15 85.5 109 45.9
GSVIVG01022551001 Vitis vinifera HOM05D005113 ORTHO05D006045 2.9e-15 85.5 113 46.0
FAN02G2823 Fragaria x ananassa HOM05D005113 ORTHO05D006045 4.9e-15 84.7 125 44.8
FAN05G0955 Fragaria x ananassa HOM05D005113 ORTHO05D006045 4.9e-15 84.7 124 44.4
FAN05G3212 Fragaria x ananassa HOM05D005113 ORTHO05D006045 4.9e-15 84.7 124 44.4
Rhsim04G0135100 Rhododendron simsii HOM05D005113 ORTHO05D006045 1.4e-14 83.2 119 46.2
Sabra16G0067600 Salix brachista HOM05D005113 ORTHO05D006045 1.4e-14 83.2 113 44.2
PGSC0003DMG400028226 Solanum tuberosum HOM05D009103 ORTHO05D010883 2.4e-14 82.4 112 43.8
Atru.chr8.1293 Acer truncatum HOM05D005113 ORTHO05D006045 7.0e-14 80.9 119 41.2
CANSAT64G1258 Cannabis sativa HOM05D005113 ORTHO05D006045 9.2e-14 80.5 114 44.7
HanXRQChr07g0196541 Helianthus annuus HOM05D005113 ORTHO05D006045 9.2e-14 80.5 110 50.0
DCAR_020680 Daucus carota HOM05D005113 ORTHO05D006045 1.2e-13 80.1 116 46.6
MD12G1045200 Malus domestica HOM05D005113 ORTHO05D006045 1.2e-13 80.1 123 41.5
PSO384G2214 Papaver somniferum HOM05D005113 ORTHO05D006045 2.7e-13 79.0 115 44.3
Thecc.05G109700 Theobroma cacao HOM05D005113 ORTHO05D006045 3.5e-13 78.6 121 43.0
Sopen10g032200 Solanum pennellii HOM05D005113 ORTHO05D006045 6.0e-13 77.8 112 43.8
TWI53G1462 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 6.0e-13 77.8 131 42.0
Solyc10g081690.1 Solanum lycopersicum HOM05D005113 ORTHO05D006045 7.8e-13 77.4 110 43.6
PSO339G6075 Papaver somniferum HOM05D005113 ORTHO05D006045 1.0e-12 77.0 117 43.6
Potri.016G066200 Populus trichocarpa HOM05D005113 ORTHO05D006045 1.3e-12 76.6 74 58.1
PGR142G0458 Punica granatum HOM05D005113 ORTHO05D006045 1.7e-12 76.3 112 49.1
Manes.09G042200 Manihot esculenta HOM05D005113 ORTHO05D006045 2.3e-12 75.9 111 44.1
TWI74G1336 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 2.3e-12 75.9 117 41.0
THA.LOC104803375 Tarenaya hassleriana HOM05D005113 ORTHO05D006045 3.9e-12 75.1 114 43.9
MD14G1044100 Malus domestica HOM05D005113 ORTHO05D006045 6.6e-12 74.3 124 41.9
Potri.006G200000 Populus trichocarpa HOM05D005113 ORTHO05D006045 1.5e-11 73.2 73 56.2
MBI05_g03323_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 2.5e-11 72.4 116 40.5
Lalb_Chr25g0287851 Lupinus albus HOM05D005113 ORTHO05D006045 4.3e-11 71.6 127 41.7
CiPaw.10G020600 Carya illinoinensis HOM05D005113 ORTHO05D006045 5.6e-11 71.2 73 58.9
Sabra06G0153800 Salix brachista HOM05D005113 ORTHO05D006045 5.6e-11 71.2 83 49.4
Lj1g0007298 Lotus japonicus HOM05D005113 ORTHO05D006045 7.3e-11 70.9 134 42.5
Medtr7g106840 Medicago truncatula HOM05D005113 ORTHO05D006045 9.5e-11 70.5 124 42.7
Gorai.006G147100 Gossypium raimondii HOM05D005113 ORTHO05D006045 1.2e-10 70.1 113 42.5
Lalb_Chr20g0111221 Lupinus albus HOM05D005113 ORTHO05D006045 1.2e-10 70.1 127 42.5
DCAR_009075 Daucus carota HOM05D000059 ORTHO05D012409 1.6e-10 69.7 117 43.6
Gohir.A11G315200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 1.6e-10 69.7 119 42.9
MBI11_g26202_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 3.6e-10 68.6 124 36.3
MBI11_g46321_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 3.6e-10 68.6 124 36.3
Gohir.D09G128500 Gossypium hirsutum HOM05D005113 ORTHO05D006045 4.7e-10 68.2 120 40.0
Ciclev10013205m.g Citrus clementina HOM05D005113 ORTHO05D006045 6.2e-10 67.8 73 58.9
Eucgr.A02548 Eucalyptus grandis HOM05D005113 ORTHO05D006045 8.1e-10 67.4 109 40.4
Sp5g09930 Schrenkiella parvula HOM05D005113 ORTHO05D006045 8.1e-10 67.4 73 53.4
TAR369G1050 Trochodendron aralioides HOM05D005113 ORTHO05D006045 8.1e-10 67.4 72 55.6
CARHR162120 Cardamine hirsuta HOM05D005113 ORTHO05D006045 1.4e-09 66.6 73 52.1
Haze_20118 Corylus avellana HOM05D005113 ORTHO05D006045 1.4e-09 66.6 112 42.9
TAR623G1290 Trochodendron aralioides HOM05D005113 ORTHO05D006045 1.4e-09 66.6 76 52.6
Carub.0005s1871 Capsella rubella HOM05D005113 ORTHO05D006045 1.8e-09 66.2 73 52.1
QL07p026499 Quercus lobata HOM05D005113 ORTHO05D006045 1.8e-09 66.2 82 52.4
BcaB02g08576 Brassica carinata HOM05D005113 ORTHO05D006045 3.1e-09 65.5 73 52.1
BcaC02g09265 Brassica carinata HOM05D005113 ORTHO05D006045 3.1e-09 65.5 73 52.1
A04p07080 Brassica napus HOM05D005113 ORTHO05D006045 3.1e-09 65.5 73 52.1
C04p40660 Brassica napus HOM05D005113 ORTHO05D006045 3.1e-09 65.5 73 52.1
BolC4t25648H Brassica oleracea HOM05D005113 ORTHO05D006045 3.1e-09 65.5 73 52.1
BraA04t16405Z Brassica rapa HOM05D005113 ORTHO05D006045 3.1e-09 65.5 73 52.1
Gohir.D11G332200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 3.1e-09 65.5 117 40.2
Duzib093G2033 Durio zibethinus HOM05D005113 ORTHO05D006045 4.0e-09 65.1 72 55.6
Thhalv10010863m.g Eutrema salsugineum HOM05D005113 ORTHO05D006045 4.0e-09 65.1 69 55.1
Psat3g027480 Pisum sativum HOM05D005113 ORTHO05D006045 4.0e-09 65.1 131 39.7
TWI77G0719 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 6.8e-09 64.3 72 50.0
AT3G52360 Arabidopsis thaliana HOM05D005113 ORTHO05D006045 8.9e-09 63.9 79 48.1
COL.COLO4_29500 Corchorus olitorius HOM05D005113 ORTHO05D006045 8.9e-09 63.9 107 40.2
Phvul.001G198200 Phaseolus vulgaris HOM05D005113 ORTHO05D006045 8.9e-09 63.9 133 39.1
Aa31LG10G7390 Aethionema arabicum HOM05D005113 ORTHO05D006045 1.2e-08 63.5 70 54.3
TPR.G34441 Trifolium pratense HOM05D005113 ORTHO05D006045 1.2e-08 63.5 128 40.6
Haze_07788 Corylus avellana HOM05D005113 ORTHO05D006045 1.5e-08 63.2 109 41.3
THA.LOC104803378 Tarenaya hassleriana HOM05D005113 ORTHO05D006045 1.5e-08 63.2 70 54.3
AL5G33010 Arabidopsis lyrata HOM05D005113 ORTHO05D006045 2.0e-08 62.8 79 46.8
BcaB01g00380 Brassica carinata HOM05D005113 ORTHO05D006045 4.4e-08 61.6 73 47.9
Gorai.007G363100 Gossypium raimondii HOM05D005113 ORTHO05D006045 4.4e-08 61.6 68 52.9
CiPaw.09G023700 Carya illinoinensis HOM05D005113 ORTHO05D006045 5.8e-08 61.2 89 47.2
BcaC07g39601 Brassica carinata HOM05D005113 ORTHO05D006045 9.9e-08 60.5 73 47.9
C08p27550 Brassica napus HOM05D005113 ORTHO05D006045 9.9e-08 60.5 73 47.9
BolC8t50376H Brassica oleracea HOM05D005113 ORTHO05D006045 9.9e-08 60.5 73 47.9
BraA04t18232Z Brassica rapa HOM05D005113 ORTHO05D006045 9.9e-08 60.5 89 42.7
A04p27340 Brassica napus HOM05D005113 ORTHO05D006045 1.3e-07 60.1 89 42.7
arahy.Tifrunner.gnm1.ann1.TS08QV Arachis hypogaea HOM05D005113 ORTHO05D006045 1.7e-07 59.7 125 40.0
AUR62036329 Chenopodium quinoa HOM05D005113 ORTHO05D006045 2.9e-07 58.9 59 61.0
HPP92_013935 Vanilla planifolia HOM05D005113 ORTHO05D006045 2.9e-07 58.9 64 59.4
A09p45370 Brassica napus HOM05D005113 ORTHO05D006045 3.7e-07 58.5 73 46.6
BraA09t40001Z Brassica rapa HOM05D005113 ORTHO05D006045 3.7e-07 58.5 73 46.6
Prupe.7G090200 Prunus persica HOM05D005113 ORTHO05D006045 3.7e-07 58.5 106 43.4
Cfa019390 Carpinus fangiana HOM05D005113 ORTHO05D006045 8.3e-07 57.4 113 39.8
AL4G31960 Arabidopsis lyrata HOM05D005113 ORTHO05D006045 1.1e-06 57.0 70 47.1
arahy.Tifrunner.gnm1.ann1.7K7EQP Arachis hypogaea HOM05D005113 ORTHO05D006045 1.4e-06 56.6 131 36.6
CDE07G0213 Ceratophyllum demersum HOM05D005113 ORTHO05D006045 1.9e-06 56.2 113 34.5
AUR62038432 Chenopodium quinoa HOM05D005113 ORTHO05D006045 2.4e-06 55.8 59 57.6
Glyma.02G187500 Glycine max HOM05D005113 ORTHO05D006045 2.4e-06 55.8 116 36.2
Glyma.19G202000 Glycine max HOM05D005113 ORTHO05D006045 3.2e-06 55.5 129 36.4
BcaB06g28884 Brassica carinata HOM05D005113 ORTHO05D006045 5.4e-06 54.7 71 46.5


User provided reference genes

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