Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01781 Erythranthe guttata HOM05D002916 ORTHO05D003152 5.6e-73 277.7 161 100.0
MSTRG.26638 Avicennia marina HOM05D002916 ORTHO05D003152 2.9e-37 159.1 173 61.3
Oeu047865.1 Olea europaea HOM05D002916 ORTHO05D003152 1.1e-36 157.1 168 55.4
Dinv31688 Davidia involucrata HOM05D004140 ORTHO05D006116 1.4e-36 156.8 164 53.7
Atru.chr8.1530 Acer truncatum HOM05D002916 ORTHO05D003152 1.9e-36 156.4 165 53.3
Atru.chr8.1528 Acer truncatum HOM05D002916 ORTHO05D003152 2.5e-36 156.0 166 53.0
Oeu056929.1 Olea europaea HOM05D002916 ORTHO05D003152 1.0e-34 150.6 166 51.8
Rhsim03G0074900 Rhododendron simsii HOM05D002916 ORTHO05D003152 7.4e-33 144.4 171 48.0
COL.COLO4_29727 Corchorus olitorius HOM05D002916 ORTHO05D003152 8.2e-32 141.0 171 49.1
Migut.J01032 Erythranthe guttata HOM05D002916 ORTHO05D003152 1.1e-31 140.6 173 47.4
RcHm_v2.0_Chr3g0473821 Rosa chinensis HOM05D002916 ORTHO05D003152 3.1e-31 139.0 169 49.1
Cpa.g.sc5.15 Carica papaya HOM05D002916 ORTHO05D003152 4.1e-31 138.7 174 49.4
Hma1.2p1_0084F.1_g043850 Hydrangea macrophylla HOM05D002916 ORTHO05D003152 1.2e-30 137.1 144 52.1
Hma1.2p1_0820F.1_g223855 Hydrangea macrophylla HOM05D002916 ORTHO05D003152 1.2e-30 137.1 144 52.1
Prupe.7G109500 Prunus persica HOM05D002916 ORTHO05D003152 1.5e-30 136.7 169 47.9
Gohir.D09G135200 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.6e-30 136.0 172 44.8
Duzib093G0112 Durio zibethinus HOM05D002916 ORTHO05D003152 3.4e-30 135.6 169 47.9
Gorai.006G155100 Gossypium raimondii HOM05D002916 ORTHO05D003152 5.9e-30 134.8 170 44.1
Gohir.A07G134900 Gossypium hirsutum HOM05D002916 ORTHO05D003152 7.6e-30 134.4 172 44.2
Peaxi162Scf00404g00102 Petunia axillaris HOM05D002916 ORTHO05D003152 1.0e-29 134.0 172 47.1
Phvul.001G190500 Phaseolus vulgaris HOM05D002916 ORTHO05D003152 1.0e-29 134.0 166 53.0
QL05p034193 Quercus lobata HOM05D002916 ORTHO05D003152 1.0e-29 134.0 167 48.5
Aqoxy4G02773 Aquilegia oxysepala HOM05D002916 ORTHO05D003152 1.3e-29 133.7 164 45.7
Gorai.002G239800 Gossypium raimondii HOM05D002916 ORTHO05D003152 1.3e-29 133.7 171 46.2
Thecc.05G089800 Theobroma cacao HOM05D002916 ORTHO05D003152 1.3e-29 133.7 169 48.5
Ciclev10012941m.g Citrus clementina HOM05D002916 ORTHO05D003152 1.7e-29 133.3 165 46.7
Gohir.A11G003500 Gossypium hirsutum HOM05D002916 ORTHO05D003152 3.8e-29 132.1 144 46.5
Glyma.10G072400 Glycine max HOM05D002916 ORTHO05D003152 5.0e-29 131.7 166 45.2
Glyma.19G194943 Glycine max HOM05D002916 ORTHO05D003152 6.5e-29 131.3 167 44.9
VMungo1383G0514 Vigna mungo HOM05D002916 ORTHO05D003152 6.5e-29 131.3 166 50.0
Manes.09G055000 Manihot esculenta HOM05D002916 ORTHO05D003152 8.5e-29 131.0 166 51.8
TWI53G0172 Tripterygium wilfordii HOM05D002916 ORTHO05D003152 1.1e-28 130.6 169 48.5
Nn6g34891 Nelumbo nucifera HOM05D002916 ORTHO05D003152 1.4e-28 130.2 167 47.9
Gohir.D01G195600 Gossypium hirsutum HOM05D002916 ORTHO05D003152 1.9e-28 129.8 171 45.6
MD12G1036700 Malus domestica HOM05D002916 ORTHO05D003152 1.9e-28 129.8 171 45.0
Gohir.A01G206200 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.5e-28 129.4 173 45.1
Ciclev10013433m.g Citrus clementina HOM05D002916 ORTHO05D003152 4.2e-28 128.6 174 46.0
Lalb_Chr01g0018131 Lupinus albus HOM05D002916 ORTHO05D003152 4.2e-28 128.6 172 44.8
Duzib128G0442 Durio zibethinus HOM05D002916 ORTHO05D003152 7.2e-28 127.9 169 45.0
Gohir.A04G062400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 7.2e-28 127.9 161 44.7
MD14G1023400 Malus domestica HOM05D002916 ORTHO05D003152 7.2e-28 127.9 170 50.0
Potri.006G213100 Populus trichocarpa HOM05D002916 ORTHO05D003152 9.3e-28 127.5 166 47.0
PGSC0003DMG400008880 Solanum tuberosum HOM05D002916 ORTHO05D003152 1.2e-27 127.1 190 41.6
Actinidia05426 Actinidia chinensis HOM05D002916 ORTHO05D003152 1.6e-27 126.7 172 45.9
Nn2g14164 Nelumbo nucifera HOM05D002916 ORTHO05D003152 2.1e-27 126.3 168 46.4
FAN02G4366 Fragaria x ananassa HOM05D002916 ORTHO05D003152 2.7e-27 125.9 169 45.6
Manes.08G025700 Manihot esculenta HOM05D002916 ORTHO05D003152 2.7e-27 125.9 171 46.2
TWI74G0225 Tripterygium wilfordii HOM05D002916 ORTHO05D003152 2.7e-27 125.9 171 47.4
FAN05G3486 Fragaria x ananassa HOM05D002916 ORTHO05D003152 3.6e-27 125.6 169 46.2
FAN05G4254 Fragaria x ananassa HOM05D002916 ORTHO05D003152 3.6e-27 125.6 169 46.2
Gorai.009G402300 Gossypium raimondii HOM05D002916 ORTHO05D003152 3.6e-27 125.6 161 43.5
Gohir.D04G099400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 4.6e-27 125.2 161 43.5
Ca_09009_v3 Cicer arietinum L. HOM05D002916 ORTHO05D003152 6.1e-27 124.8 169 45.6
Gohir.A05G000100 Gossypium hirsutum HOM05D002916 ORTHO05D003152 6.1e-27 124.8 144 45.1
Haze_16634 Corylus avellana HOM05D002916 ORTHO05D003152 7.9e-27 124.4 174 44.3
Potri.016G079700 Populus trichocarpa HOM05D002916 ORTHO05D003152 7.9e-27 124.4 166 45.8
FvH4_6g18810 Fragaria vesca HOM05D002916 ORTHO05D003152 1.0e-26 124.0 169 46.2
FAN14G1204 Fragaria x ananassa HOM05D002916 ORTHO05D003152 1.0e-26 124.0 169 46.2
Glyma.03G196300 Glycine max HOM05D002916 ORTHO05D003152 1.0e-26 124.0 167 43.7
Haze_16636 Corylus avellana HOM05D002916 ORTHO05D003152 1.8e-26 123.2 174 43.7
CiPaw.01G252200 Carya illinoinensis HOM05D002916 ORTHO05D003152 3.9e-26 122.1 169 45.0
Eucgr.K02033 Eucalyptus grandis HOM05D002916 ORTHO05D003152 6.7e-26 121.3 180 45.0
Glyma.13G153800 Glycine max HOM05D002916 ORTHO05D003152 1.1e-25 120.6 168 44.6
Cfa001906 Carpinus fangiana HOM05D002916 ORTHO05D003152 1.5e-25 120.2 170 44.1
Sabra16G0087700 Salix brachista HOM05D002916 ORTHO05D003152 1.9e-25 119.8 168 44.6
DCAR_007755 Daucus carota HOM05D002916 ORTHO05D003152 4.3e-25 118.6 160 47.5
Cc06_g05820 Coffea canephora HOM05D002916 ORTHO05D003152 5.7e-25 118.2 171 41.5
Gohir.A09G139400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 5.7e-25 118.2 127 48.8
Sabra16G0085600 Salix brachista HOM05D002916 ORTHO05D003152 7.4e-25 117.9 168 44.0
Actinidia31270 Actinidia chinensis HOM05D002916 ORTHO05D003152 9.7e-25 117.5 161 44.7
Lj1g0017693 Lotus japonicus HOM05D002916 ORTHO05D003152 9.7e-25 117.5 172 43.6
MELO3C024547.2 Cucumis melo HOM05D002916 ORTHO05D003152 1.3e-24 117.1 178 39.9
Solyc09g009810.1 Solanum lycopersicum HOM05D002916 ORTHO05D003152 2.8e-24 115.9 198 38.9
Lsat_1_v5_gn_5_164861 Lactuca sativa HOM05D002916 ORTHO05D003152 3.7e-24 115.5 165 46.7
Sabra06G0164100 Salix brachista HOM05D002916 ORTHO05D003152 8.2e-24 114.4 135 49.6
CsaV3_6G040690 Cucumis sativus L. HOM05D002916 ORTHO05D003152 1.8e-23 113.2 130 45.4
SalBow4G3036 Salvia bowleyana HOM05D002916 ORTHO05D003152 4.1e-23 112.1 111 60.4
AUR62028520 Chenopodium quinoa HOM05D002916 ORTHO05D003152 6.9e-23 111.3 167 41.3
AUR62006186 Chenopodium quinoa HOM05D002916 ORTHO05D003152 1.5e-22 110.2 167 40.1
SGA_v2.0_scaffold184G39965 Striga asiatica HOM05D002916 ORTHO05D003152 3.4e-22 109.0 155 44.5
Sed0018474 Sechium edule HOM05D002916 ORTHO05D003152 1.0e-21 107.5 134 41.8
ClCG04G010060 Citrullus lanatus HOM05D002916 ORTHO05D003152 1.3e-21 107.1 166 38.0
Ah.15g090860 Amaranthus hybridus HOM05D002916 ORTHO05D003152 5.0e-21 105.1 167 38.9
CANSAT64G0492 Cannabis sativa HOM05D002916 ORTHO05D003152 6.5e-21 104.8 193 38.9
PGR004G1189 Punica granatum HOM05D002916 ORTHO05D003152 8.5e-21 104.4 165 41.8
DCAR_009166 Daucus carota HOM05D002916 ORTHO05D003152 3.2e-20 102.4 171 38.0
PSO339G4347 Papaver somniferum HOM05D002916 ORTHO05D003152 4.2e-20 102.1 175 40.0
DCAR_013392 Daucus carota HOM05D002916 ORTHO05D003152 7.2e-20 101.3 169 40.8
THA.LOC104816397 Tarenaya hassleriana HOM05D002916 ORTHO05D003152 9.4e-20 100.9 181 32.0
DCAR_013390 Daucus carota HOM05D002916 ORTHO05D003152 1.2e-19 100.5 167 39.5
arahy.Tifrunner.gnm1.ann1.1GMW3T Arachis hypogaea HOM05D002916 ORTHO05D003152 1.6e-19 100.1 190 44.7
arahy.Tifrunner.gnm1.ann1.T8X57X Arachis hypogaea HOM05D002916 ORTHO05D003152 1.6e-19 100.1 190 44.7
DCAR_013389 Daucus carota HOM05D002916 ORTHO05D003152 2.1e-19 99.8 170 39.4
DCAR_013391 Daucus carota HOM05D002916 ORTHO05D003152 3.6e-19 99.0 167 40.7
CARHR084600 Cardamine hirsuta HOM05D002916 ORTHO05D003152 4.7e-19 98.6 187 32.6
AT3G10120 Arabidopsis thaliana HOM05D002916 ORTHO05D003152 1.8e-18 96.7 177 34.5
BcaNung05911 Brassica carinata HOM05D002916 ORTHO05D003152 1.8e-18 96.7 180 32.8
A05p38970 Brassica napus HOM05D002916 ORTHO05D003152 3.0e-18 95.9 170 34.1
Carub.0008s0814 Capsella rubella HOM05D002916 ORTHO05D003152 3.9e-18 95.5 190 33.7
BcaNung06240 Brassica carinata HOM05D002916 ORTHO05D003152 5.1e-18 95.1 142 36.6
BraA05t22688Z Brassica rapa HOM05D002916 ORTHO05D003152 5.1e-18 95.1 170 33.5
C05p58000 Brassica napus HOM05D002916 ORTHO05D003152 8.8e-18 94.4 170 32.9
BolC5t34456H Brassica oleracea HOM05D002916 ORTHO05D003152 1.1e-17 94.0 169 33.7
Sp3g08400 Schrenkiella parvula HOM05D002916 ORTHO05D003152 2.0e-17 93.2 180 33.9
Nitab4.5_0001712g0010 Nicotiana tabacum HOM05D002916 ORTHO05D003152 2.6e-17 92.8 131 45.0
AL3G21460 Arabidopsis lyrata HOM05D002916 ORTHO05D003152 3.3e-17 92.4 152 35.5
Thhalv10021626m.g Eutrema salsugineum HOM05D002916 ORTHO05D003152 3.3e-17 92.4 183 33.3
BcaB04g21229 Brassica carinata HOM05D002916 ORTHO05D003152 2.2e-16 89.7 176 30.1
Nitab4.5_0000794g0180 Nicotiana tabacum HOM05D002916 ORTHO05D003152 4.8e-16 88.6 166 36.1
AT5G03890 Arabidopsis thaliana HOM05D002916 ORTHO05D003152 8.2e-16 87.8 177 31.6
A03p01480 Brassica napus HOM05D002916 ORTHO05D003152 1.4e-15 87.0 186 30.6
BraA03t09526Z Brassica rapa HOM05D002916 ORTHO05D003152 1.4e-15 87.0 186 30.6
PGR142G0380 Punica granatum HOM05D002916 ORTHO05D003152 1.4e-15 87.0 172 33.1
CARHR209370 Cardamine hirsuta HOM05D002916 ORTHO05D003152 2.4e-15 86.3 180 32.8
AL6G13470 Arabidopsis lyrata HOM05D002916 ORTHO05D003152 4.1e-15 85.5 177 31.1
THA.LOC104826943 Tarenaya hassleriana HOM05D002916 ORTHO05D003152 4.1e-15 85.5 165 42.4
C03p01810 Brassica napus HOM05D002916 ORTHO05D003152 9.1e-15 84.3 178 30.9
Aa31LG3G2650 Aethionema arabicum HOM05D002916 ORTHO05D003152 1.2e-14 84.0 164 32.9
BcaC09g48115 Brassica carinata HOM05D002916 ORTHO05D003152 1.2e-14 84.0 176 30.7
Carub.0006s0284 Capsella rubella HOM05D002916 ORTHO05D003152 1.2e-14 84.0 149 31.5
BolC1t05420H Brassica oleracea HOM05D002916 ORTHO05D003152 1.5e-14 83.6 178 32.0
A10p32230 Brassica napus HOM05D002916 ORTHO05D003152 4.5e-14 82.0 174 29.3
BraA10t45266Z Brassica rapa HOM05D002916 ORTHO05D003152 4.5e-14 82.0 174 29.3
Thhalv10014801m.g Eutrema salsugineum HOM05D002916 ORTHO05D003152 5.9e-14 81.6 149 32.9
BolC3t12736H Brassica oleracea HOM05D002916 ORTHO05D003152 7.7e-14 81.3 140 33.6
BolC9t60038H Brassica oleracea HOM05D002916 ORTHO05D003152 2.9e-13 79.3 174 28.2
Nitab4.5_0003610g0010 Nicotiana tabacum HOM05D002916 ORTHO05D003152 2.9e-13 79.3 167 35.9
C09p73040 Brassica napus HOM05D002916 ORTHO05D003152 5.0e-13 78.6 174 28.7
SEGI_19412 Sequoiadendron giganteum HOM05D002916 ORTHO05D003152 8.5e-13 77.8 185 29.7
Sopen09g004570 Solanum pennellii HOM05D002916 ORTHO05D003152 8.5e-13 77.8 175 34.3
BcaB01g05762 Brassica carinata HOM05D002916 ORTHO05D003152 1.1e-12 77.4 169 32.0
BcaC06g32092 Brassica carinata HOM05D002916 ORTHO05D003152 1.4e-12 77.0 179 29.6
PSO384G2526 Papaver somniferum HOM05D002916 ORTHO05D003152 1.9e-12 76.6 173 33.5
ATR0078G023 Amborella trichopoda HOM05D002916 ORTHO05D003152 3.2e-12 75.9 171 33.3
Prupe.2G317800 Prunus persica HOM05D002916 ORTHO05D003152 3.2e-12 75.9 163 32.5
A01p42040 Brassica napus HOM05D002916 ORTHO05D003152 4.2e-12 75.5 150 33.3
BraA01t04273Z Brassica rapa HOM05D002916 ORTHO05D003152 4.2e-12 75.5 150 33.3
Psat5g073040 Pisum sativum HOM05D002916 ORTHO05D003152 7.2e-12 74.7 174 35.1
Nitab4.5_0009023g0020 Nicotiana tabacum HOM05D002916 ORTHO05D003152 2.1e-11 73.2 144 35.4
Hma1.2p1_0094F.1_g047290 Hydrangea macrophylla HOM05D002916 ORTHO05D003152 2.7e-11 72.8 176 33.5
SGA_v2.0_scaffold35G14068 Striga asiatica HOM05D002916 ORTHO05D003152 4.7e-11 72.0 106 45.3
Sp6g38840 Schrenkiella parvula HOM05D002916 ORTHO05D003152 1.0e-10 70.9 172 29.7
VMungo1309G2175 Vigna mungo HOM05D002916 ORTHO05D003152 1.0e-10 70.9 171 31.6
Medtr7g104680 Medicago truncatula HOM05D002916 ORTHO05D003152 1.8e-10 70.1 171 33.9
Dinv29219 Davidia involucrata HOM05D002916 ORTHO05D003152 2.3e-10 69.7 163 33.7
Phvul.009G046400 Phaseolus vulgaris HOM05D002916 ORTHO05D003152 2.3e-10 69.7 173 31.2
Thecc.03G207400 Theobroma cacao HOM05D002916 ORTHO05D003152 2.3e-10 69.7 161 31.7
Duzib084G1372 Durio zibethinus HOM05D002916 ORTHO05D003152 3.0e-10 69.3 157 32.5
Glyma.06G135000 Glycine max HOM05D002916 ORTHO05D003152 3.0e-10 69.3 161 32.9
QL02p027552 Quercus lobata HOM05D002916 ORTHO05D003152 3.0e-10 69.3 156 34.0
Gohir.D12G247400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 3.9e-10 68.9 168 30.4
QL09p007312 Quercus lobata HOM05D002916 ORTHO05D003152 6.7e-10 68.2 169 32.5
Gorai.008G265400 Gossypium raimondii HOM05D002916 ORTHO05D003152 8.8e-10 67.8 153 31.4
CANSAT21G0001 Cannabis sativa HOM05D002916 ORTHO05D003152 1.1e-09 67.4 160 30.6
Sabra12G0011500 Salix brachista HOM05D002916 ORTHO05D003152 1.1e-09 67.4 163 31.3
TPR.G23310 Trifolium pratense HOM05D002916 ORTHO05D003152 1.5e-09 67.0 169 33.1
MBI04_g15577_MAGBIO Magnolia biondii HOM05D002916 ORTHO05D003152 2.0e-09 66.6 168 31.5
DCAR_020363 Daucus carota HOM05D002916 ORTHO05D003152 2.6e-09 66.2 177 29.4
Glyma.04G229700 Glycine max HOM05D002916 ORTHO05D003152 2.6e-09 66.2 160 33.1
CsaV3_5G000050 Cucumis sativus L. HOM05D002916 ORTHO05D003152 3.3e-09 65.9 153 30.7
Sed0016396 Sechium edule HOM05D002916 ORTHO05D003152 4.4e-09 65.5 153 28.8
Gohir.A12G246700 Gossypium hirsutum HOM05D002916 ORTHO05D003152 5.7e-09 65.1 168 29.8
Nn3g18859 Nelumbo nucifera HOM05D002916 ORTHO05D003152 5.7e-09 65.1 152 40.8
TAR636G0145 Trochodendron aralioides HOM05D002916 ORTHO05D003152 5.7e-09 65.1 173 29.5
TAR623G0367 Trochodendron aralioides HOM05D002916 ORTHO05D003152 7.4e-09 64.7 128 38.3
Potri.012G022300 Populus trichocarpa HOM05D002916 ORTHO05D003152 1.3e-08 63.9 164 31.1
Manes.01G042300 Manihot esculenta HOM05D002916 ORTHO05D003152 1.7e-08 63.5 147 30.6
Rhsim03G0214600 Rhododendron simsii HOM05D001023 ORTHO05D000912 1.7e-08 63.5 138 32.6
COL.COLO4_14359 Corchorus olitorius HOM05D002916 ORTHO05D003152 2.2e-08 63.2 175 31.4
Cfa016172 Carpinus fangiana HOM05D002916 ORTHO05D003152 8.2e-08 61.2 150 31.3
CSS0010688 Camellia sinensis var. sinensis HOM05D002916 ORTHO05D003152 1.1e-07 60.8 120 35.8
Haze_09193 Corylus avellana HOM05D002916 ORTHO05D003152 1.1e-07 60.8 177 30.5
Dinv21202 Davidia involucrata HOM05D002916 ORTHO05D003152 1.1e-07 60.8 87 43.7
Haze_00282 Corylus avellana HOM05D002916 ORTHO05D003152 1.4e-07 60.5 150 29.3
MELO3C005922.2 Cucumis melo HOM05D002916 ORTHO05D003152 3.1e-07 59.3 153 29.4
Lalb_Chr08g0239761 Lupinus albus HOM05D002916 ORTHO05D003152 4.1e-07 58.9 159 29.6
RcHm_v2.0_Chr1g0382771 Rosa chinensis HOM05D002916 ORTHO05D003152 4.1e-07 58.9 180 29.4
Atru.chr12.2401 Acer truncatum HOM05D002916 ORTHO05D003152 9.1e-07 57.8 157 28.0
CiPaw.06G042000 Carya illinoinensis HOM05D002916 ORTHO05D003152 9.1e-07 57.8 173 27.7
ClCG01G000110 Citrullus lanatus HOM05D002916 ORTHO05D003152 9.1e-07 57.8 154 29.2
TPR.G36204 Trifolium pratense HOM05D002916 ORTHO05D003152 1.6e-06 57.0 151 31.8
Ca_16766_v3 Cicer arietinum L. HOM05D002916 ORTHO05D003152 2.0e-06 56.6 166 30.1
Potri.015G005700 Populus trichocarpa HOM05D002916 ORTHO05D003152 3.5e-06 55.8 162 27.8
Medtr3g092470 Medicago truncatula HOM05D002916 ORTHO05D003152 4.5e-06 55.5 174 33.9
ECA236G4089 Erigeron canadensis HOM05D002916 ORTHO05D003152 5.9e-06 55.1 169 30.2
Actinidia34261 Actinidia chinensis HOM05D002916 ORTHO05D003152 7.7e-06 54.7 147 30.6


User provided reference genes

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