Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 6.7e-125 450.7 225 100.0
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 5.2e-93 344.7 225 73.3
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 1.1e-79 300.4 225 67.1
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 1.6e-73 280.0 220 61.4
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 1.6e-73 280.0 220 61.4
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 1.7e-72 276.6 220 60.5
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 6.8e-69 264.6 251 55.0
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 1.5e-68 263.5 225 58.7
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 7.6e-68 261.2 222 59.0
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 2.2e-67 259.6 221 56.6
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 1.4e-66 256.9 225 55.1
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 2.4e-66 256.1 218 57.3
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 2.1e-65 253.1 225 56.9
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 2.8e-62 242.7 227 53.7
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 4.4e-60 235.3 226 50.0
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 4.9e-59 231.9 194 57.7
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 1.4e-58 230.3 224 51.3
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 1.4e-58 230.3 210 52.4
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 4.2e-58 228.8 221 48.9
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 7.1e-58 228.0 212 52.8
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 3.5e-57 225.7 228 48.2
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 4.6e-57 225.3 202 53.5
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 4.6e-57 225.3 226 50.4
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 6.0e-57 224.9 228 50.9
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 3.9e-56 222.2 226 50.4
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 6.6e-56 221.5 228 51.3
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 1.5e-55 220.3 228 51.3
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 2.5e-55 219.5 228 50.9
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 5.6e-55 218.4 221 52.0
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 2.8e-54 216.1 227 50.7
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 3.6e-54 215.7 226 50.0
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 4.8e-54 215.3 226 48.2
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 8.1e-54 214.5 221 47.5
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 8.1e-54 214.5 223 48.0
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 1.4e-53 213.8 197 52.3
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 1.4e-53 213.8 226 48.2
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 1.8e-53 213.4 185 52.4
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 1.8e-53 213.4 228 49.6
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 3.1e-53 212.6 223 47.5
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 3.1e-53 212.6 236 48.3
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 5.3e-53 211.8 230 47.0
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 6.9e-53 211.5 236 48.7
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 3.4e-52 209.1 192 56.2
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 7.6e-52 208.0 201 51.2
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 1.7e-51 206.8 254 42.9
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 4.9e-51 205.3 226 46.9
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 4.9e-51 205.3 226 45.1
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 1.4e-50 203.8 225 47.6
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 5.5e-50 201.8 225 47.6
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 5.5e-50 201.8 221 45.2
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 1.2e-49 200.7 195 49.7
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 4.6e-49 198.7 230 47.8
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 2.3e-48 196.4 227 45.8
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 8.7e-48 194.5 222 46.8
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 8.7e-48 194.5 213 46.5
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 8.7e-48 194.5 230 45.2
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 1.1e-47 194.1 194 49.5
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.9e-47 193.4 222 45.0
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 4.3e-47 192.2 224 44.2
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 7.4e-47 191.4 208 46.2
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 7.4e-47 191.4 213 46.0
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 9.6e-47 191.0 180 50.6
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 2.8e-46 189.5 229 42.8
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 3.7e-46 189.1 220 45.9
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 4.8e-46 188.7 192 46.9
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 4.8e-46 188.7 183 49.2
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 8.1e-46 188.0 233 44.2
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 2.4e-45 186.4 178 47.8
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 3.1e-45 186.0 213 44.6
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 3.1e-45 186.0 164 48.8
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 6.9e-45 184.9 234 43.2
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 1.2e-44 184.1 232 42.7
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 1.5e-44 183.7 232 41.8
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 1.5e-44 183.7 233 42.5
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 2.0e-44 183.3 233 43.3
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 7.6e-44 181.4 233 42.1
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 8.4e-43 177.9 227 45.4
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 2.5e-42 176.4 165 49.7
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 1.2e-41 174.1 225 41.8
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 2.1e-41 173.3 172 47.1
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 3.5e-41 172.6 285 34.4
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 6.0e-41 171.8 150 53.3
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 5.1e-40 168.7 180 45.6
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 1.1e-39 167.5 225 39.1
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 1.5e-39 167.2 183 44.8
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 7.4e-39 164.9 259 38.6
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 3.7e-38 162.5 234 36.3
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 1.1e-37 161.0 194 43.8
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 4.1e-37 159.1 207 39.6
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 2.2e-35 153.3 198 42.9
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 6.5e-35 151.8 150 54.7
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 6.3e-30 135.2 226 38.1
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 1.7e-27 127.1 148 44.6
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 4.6e-25 119.0 83 62.7
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 4.8e-22 109.0 120 41.7
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 1.8e-21 107.1 129 44.2
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 2.4e-21 106.7 114 47.4
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 9.1e-21 104.8 186 35.5
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 1.8e-16 90.5 157 33.8
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 6.7e-16 88.6 76 52.6
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 1.7e-14 84.0 87 41.4
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 5.3e-13 79.0 61 59.0
Pp3c16_16690 Physcomitrium patens HOM05D007171 ORTHO05D008946 2.0e-12 77.0 218 27.5
Oeu008469.1 Olea europaea HOM05D007171 ORTHO05D008946 5.9e-12 75.5 215 27.4
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 5.0e-11 72.4 73 49.3


User provided reference genes

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