Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 5.3e-137 491.1 265 100.0
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 2.8e-122 442.2 265 87.2
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 4.8e-122 441.4 265 85.3
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 1.8e-121 439.5 265 84.5
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 9.1e-121 437.2 265 84.9
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 1.5e-120 436.4 265 87.2
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 2.6e-120 435.6 265 86.0
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 7.7e-120 434.1 265 85.7
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 1.0e-119 433.7 265 86.0
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 1.0e-119 433.7 265 86.0
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 1.3e-119 433.3 265 85.3
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 1.7e-119 433.0 265 86.0
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 2.2e-119 432.6 265 86.0
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 2.2e-119 432.6 265 85.7
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 3.8e-119 431.8 265 84.9
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 5.0e-119 431.4 265 85.3
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 5.0e-119 431.4 265 86.4
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.1e-118 430.3 265 84.5
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 3.2e-118 428.7 265 83.8
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 5.5e-118 427.9 263 85.9
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 7.2e-118 427.6 265 85.7
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 1.6e-117 426.4 264 84.5
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 1.6e-117 426.4 265 84.2
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 2.1e-117 426.0 264 83.7
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 2.1e-117 426.0 265 83.0
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 2.7e-117 425.6 261 84.7
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 2.7e-117 425.6 265 82.3
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 4.7e-117 424.9 278 82.0
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 4.7e-117 424.9 263 84.4
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 4.7e-117 424.9 261 85.8
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 6.1e-117 424.5 265 84.2
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 8.0e-117 424.1 264 84.8
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 8.0e-117 424.1 265 85.3
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 1.0e-116 423.7 259 84.6
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.0e-116 423.7 265 82.6
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 1.4e-116 423.3 259 84.6
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 1.8e-116 422.9 259 84.2
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.8e-116 422.9 265 82.6
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 3.0e-116 422.2 265 84.5
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 5.2e-116 421.4 265 82.6
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 5.2e-116 421.4 265 82.3
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 6.7e-116 421.0 264 82.6
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 6.7e-116 421.0 265 81.9
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 6.7e-116 421.0 265 82.6
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 8.8e-116 420.6 259 84.2
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 8.8e-116 420.6 259 84.2
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 8.8e-116 420.6 265 82.3
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 2.0e-115 419.5 261 83.1
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 2.0e-115 419.5 265 82.3
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 2.6e-115 419.1 258 85.3
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 2.6e-115 419.1 265 83.4
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 7.4e-115 417.5 261 82.8
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 1.7e-114 416.4 265 83.4
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 2.2e-114 416.0 262 82.4
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 4.8e-114 414.8 260 82.7
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 4.8e-114 414.8 260 82.7
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 6.3e-114 414.5 261 82.4
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 6.3e-114 414.5 261 82.8
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 8.2e-114 414.1 261 82.4
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 8.2e-114 414.1 265 80.8
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 8.2e-114 414.1 253 87.4
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 1.1e-113 413.7 274 80.3
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 1.4e-113 413.3 262 82.8
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 1.8e-113 412.9 265 82.6
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 1.8e-113 412.9 261 83.5
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 5.3e-113 411.4 261 81.2
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 7.0e-113 411.0 261 82.0
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 1.2e-112 410.2 255 83.5
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 1.2e-112 410.2 262 81.7
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 1.6e-112 409.8 261 82.4
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 2.6e-112 409.1 262 81.7
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 2.6e-112 409.1 261 80.8
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 3.5e-112 408.7 262 81.7
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 3.5e-112 408.7 265 79.6
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 4.5e-112 408.3 258 82.6
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 7.7e-112 407.5 262 82.4
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.3e-111 406.8 262 81.3
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 1.7e-111 406.4 262 81.3
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 2.2e-111 406.0 262 80.5
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 2.9e-111 405.6 265 80.0
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 3.8e-111 405.2 255 82.4
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 5.0e-111 404.8 263 82.5
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 6.5e-111 404.4 254 83.9
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.1e-110 403.7 250 85.2
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 2.5e-110 402.5 258 81.8
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 5.5e-110 401.4 250 83.6
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 5.5e-110 401.4 264 80.3
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 7.2e-110 401.0 261 80.1
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 9.4e-110 400.6 241 88.0
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 9.4e-110 400.6 253 82.2
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 1.6e-109 399.8 261 80.1
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 3.6e-109 398.7 262 80.2
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 3.6e-109 398.7 262 80.2
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 5.2e-108 394.8 259 80.7
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 5.7e-107 391.3 259 79.9
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 7.5e-107 391.0 287 77.0
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 7.5e-107 391.0 255 80.0
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 9.7e-107 390.6 261 77.4
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 1.7e-106 389.8 261 78.2
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 2.8e-106 389.0 258 79.1
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 3.1e-105 385.6 286 74.1
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 2.7e-104 382.5 257 76.3
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 2.2e-103 379.4 238 81.9
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 2.9e-103 379.0 225 88.4
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 2.5e-102 375.9 257 76.7
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 9.4e-102 374.0 225 88.4
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 1.6e-101 373.2 259 77.6
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 3.0e-100 369.0 261 72.4
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 2.6e-99 365.9 263 72.6
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 2.8e-98 362.5 265 75.8
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 3.5e-96 355.5 261 69.7
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 9.5e-94 347.4 257 69.3
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 8.0e-93 344.4 254 69.3
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 1.5e-91 340.1 265 71.7
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 9.5e-86 320.9 212 81.6
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 4.0e-84 315.5 252 67.1
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 2.8e-69 266.2 256 54.3
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 2.2e-66 256.5 265 58.5
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 2.9e-66 256.1 179 74.3
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 1.1e-62 244.2 150 86.0
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 2.1e-61 240.0 161 79.5
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 6.8e-60 235.0 154 84.4
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 2.4e-52 209.9 235 46.4
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 7.6e-51 204.9 265 49.4
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 3.5e-48 196.1 249 43.0
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 4.6e-40 169.1 233 42.1
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 4.5e-35 152.5 98 77.6
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.1e-33 147.9 96 82.3
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.9e-33 147.1 239 37.2
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 4.3e-30 136.0 77 90.9
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 9.0e-28 128.3 119 60.5
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 2.0e-27 127.1 75 86.7
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 7.1e-25 118.6 233 35.6
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 1.6e-21 107.5 96 61.5
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 2.0e-11 73.9 75 58.7


User provided reference genes

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