Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 9.6e-106 386.7 180 100.0
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 1.7e-70 269.6 180 70.0
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 1.4e-69 266.5 181 69.6
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 1.2e-60 236.9 165 63.6
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 2.1e-60 236.1 178 61.8
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 2.3e-59 232.6 171 60.8
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 3.0e-59 232.3 159 64.8
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 3.9e-59 231.9 184 60.3
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 4.4e-58 228.4 169 59.2
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 1.7e-57 226.5 171 60.8
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 1.1e-56 223.8 134 70.1
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 2.4e-56 222.6 130 68.5
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 2.4e-56 222.6 169 58.0
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 5.3e-56 221.5 137 66.4
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 5.3e-56 221.5 160 63.1
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 1.5e-55 219.9 170 58.2
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 2.6e-55 219.2 180 53.9
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 7.7e-55 217.6 177 53.7
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 2.9e-54 215.7 164 56.7
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 5.0e-54 214.9 142 65.5
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 5.0e-54 214.9 168 57.7
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 6.5e-54 214.5 181 55.2
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 8.5e-54 214.2 177 53.1
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 8.5e-54 214.2 172 57.0
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 8.5e-54 214.2 178 55.6
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 2.5e-53 212.6 150 62.0
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 3.2e-53 212.2 180 52.2
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 3.2e-53 212.2 180 51.7
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 3.2e-53 212.2 150 60.7
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 3.2e-53 212.2 145 60.7
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 4.2e-53 211.8 179 50.8
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 4.2e-53 211.8 176 56.2
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 5.5e-53 211.5 180 52.2
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 5.5e-53 211.5 167 57.5
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 1.2e-52 210.3 170 56.5
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.2e-52 210.3 166 57.8
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.2e-52 210.3 170 56.5
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 1.6e-52 209.9 140 65.7
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 1.6e-52 209.9 175 56.6
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 2.1e-52 209.5 177 51.4
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 2.7e-52 209.1 139 62.6
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 2.7e-52 209.1 180 52.2
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 2.7e-52 209.1 169 56.2
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 6.1e-52 208.0 162 54.9
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 1.4e-51 206.8 175 53.7
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 1.8e-51 206.5 161 56.5
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 2.3e-51 206.1 177 53.7
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 2.3e-51 206.1 173 54.3
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 2.3e-51 206.1 162 56.8
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 2.3e-51 206.1 151 60.9
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 3.9e-51 205.3 168 56.0
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 3.9e-51 205.3 180 50.0
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 5.2e-51 204.9 143 61.5
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 6.7e-51 204.5 148 61.5
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 6.7e-51 204.5 143 61.5
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 8.8e-51 204.1 162 56.2
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 1.5e-50 203.4 140 62.9
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 1.5e-50 203.4 124 64.5
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 1.5e-50 203.4 170 52.4
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 2.0e-50 203.0 128 66.4
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 2.0e-50 203.0 162 57.4
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 2.6e-50 202.6 167 55.7
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 2.6e-50 202.6 139 59.7
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 3.3e-50 202.2 150 60.7
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 4.4e-50 201.8 145 62.1
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 5.7e-50 201.4 177 49.7
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 5.7e-50 201.4 160 55.0
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 7.4e-50 201.1 190 51.6
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 1.7e-49 199.9 180 48.9
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 2.8e-49 199.1 147 59.2
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 3.7e-49 198.7 168 55.4
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 1.8e-48 196.4 176 48.3
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 1.8e-48 196.4 138 61.6
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 7.0e-48 194.5 118 66.1
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 1.2e-47 193.7 162 58.0
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 2.9e-46 189.1 125 61.6
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 1.5e-45 186.8 174 50.6
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 1.9e-45 186.4 182 53.8
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 4.2e-45 185.3 155 51.6
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 3.6e-44 182.2 145 53.8
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 2.3e-43 179.5 146 57.5
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 3.3e-42 175.6 115 62.6
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 1.3e-41 173.7 149 51.7
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 2.2e-41 172.9 117 61.5
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 3.7e-41 172.2 116 62.9
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 8.2e-41 171.0 114 59.6
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 2.0e-39 166.4 159 45.9
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 2.9e-38 162.5 183 48.1
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 5.0e-38 161.8 159 45.3
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 6.5e-38 161.4 170 44.1
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 1.6e-36 156.8 152 48.0
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 8.0e-36 154.5 157 45.9
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 1.0e-35 154.1 170 42.9
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 2.2e-33 146.4 84 71.4
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 6.1e-28 128.3 89 60.7
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 1.0e-27 127.5 118 50.8
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 3.7e-17 92.4 176 30.1
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 3.7e-17 92.4 59 67.8
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 1.3e-14 84.0 93 43.0
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 1.1e-13 80.9 93 44.1
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 2.8e-12 76.3 58 55.2


User provided reference genes

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