Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01626 Erythranthe guttata HOM05D002036 ORTHO05D001913 0.0e+00 1117.1 573 100.0
SalBow3G1915 Salvia bowleyana HOM05D002036 ORTHO05D001913 4.0e-89 333.2 669 38.3
MSTRG.19112 Avicennia marina HOM05D002036 ORTHO05D001913 1.2e-85 321.6 672 38.7
MSTRG.5695 Avicennia marina HOM05D002036 ORTHO05D001913 4.0e-81 306.6 694 38.0
Oeu023869.2 Olea europaea HOM05D002036 ORTHO05D001913 1.1e-78 298.5 665 36.4
MSTRG.10276 Avicennia marina HOM05D002036 ORTHO05D001913 1.4e-78 298.1 660 38.9
Migut.J00378 Erythranthe guttata HOM05D002036 ORTHO05D001913 9.5e-75 285.4 597 38.7
Oeu060059.1 Olea europaea HOM05D002036 ORTHO05D001913 1.6e-74 284.6 672 37.4
SalBow4G2849 Salvia bowleyana HOM05D002036 ORTHO05D001913 2.9e-71 273.9 614 36.2
SalBow4G2077 Salvia bowleyana HOM05D002036 ORTHO05D001913 4.2e-70 270.0 614 36.0
Oeu049192.1 Olea europaea HOM05D002036 ORTHO05D001913 7.3e-67 259.2 625 36.8
MSTRG.26749 Avicennia marina HOM05D002036 ORTHO05D001913 1.3e-60 238.4 665 33.8
SGA_v2.0_scaffold75G24914 Striga asiatica HOM05D002036 ORTHO05D001913 4.6e-53 213.4 593 36.1
Dinv37219 Davidia involucrata HOM05D002036 ORTHO05D001913 5.5e-46 189.9 658 31.6
Dinv35653 Davidia involucrata HOM05D002036 ORTHO05D001913 1.9e-43 181.4 661 30.9
Nitab4.5_0010623g0020 Nicotiana tabacum HOM05D002036 ORTHO05D001913 6.9e-41 172.9 464 34.7
Peaxi162Scf00039g00072 Petunia axillaris HOM05D002036 ORTHO05D001913 6.5e-39 166.4 462 33.5
Nitab4.5_0002995g0030 Nicotiana tabacum HOM05D002036 ORTHO05D001913 1.4e-38 165.2 463 32.8
Cc06_g03130 Coffea canephora HOM05D002036 ORTHO05D001913 7.1e-38 162.9 663 30.0
SGA_v2.0_scaffold126G33842 Striga asiatica HOM05D002036 ORTHO05D001913 6.0e-37 159.8 592 31.4
Solyc09g005750.3 Solanum lycopersicum HOM05D002036 ORTHO05D001913 3.3e-35 154.1 464 32.5
Sopen09g001640 Solanum pennellii HOM05D002036 ORTHO05D001913 1.6e-34 151.8 457 32.8
PGSC0003DMG400023907 Solanum tuberosum HOM05D002036 ORTHO05D001913 4.8e-34 150.2 514 31.3
Lj2C101T4 Lonicera japonica HOM05D002036 ORTHO05D001913 1.1e-33 149.1 638 29.6
CSS0022078 Camellia sinensis var. sinensis HOM05D002036 ORTHO05D001913 1.8e-33 148.3 568 29.8
Actinidia19752 Actinidia chinensis HOM05D002036 ORTHO05D001913 2.0e-32 144.8 634 29.5
CiPaw.09G187300 Carya illinoinensis HOM05D002036 ORTHO05D001913 5.0e-31 140.2 624 29.2
Haze_20717 Corylus avellana HOM05D002036 ORTHO05D001913 2.1e-29 134.8 432 32.2
unitig_21.g21054 Utricularia gibba HOM05D002036 ORTHO05D001913 1.0e-28 132.5 582 28.2
TAR157G0003 Trochodendron aralioides HOM05D002036 ORTHO05D001913 2.3e-28 131.3 564 30.3
Cpa.g.sc2422.1 Carica papaya HOM05D002036 ORTHO05D001913 3.9e-28 130.6 495 28.9
Cfa017446 Carpinus fangiana HOM05D002036 ORTHO05D001913 1.5e-27 128.6 583 28.6
QL07p046595 Quercus lobata HOM05D002036 ORTHO05D001913 1.5e-27 128.6 522 31.2
Sabra06G0164600 Salix brachista HOM05D002036 ORTHO05D001913 1.5e-27 128.6 572 28.8
Rhsim05G0186600 Rhododendron simsii HOM05D002036 ORTHO05D001913 3.3e-27 127.5 651 28.1
unitig_744.g24663 Utricularia gibba HOM05D002036 ORTHO05D001913 4.3e-27 127.1 461 29.1
Actinidia05291 Actinidia chinensis HOM05D002036 ORTHO05D001913 5.7e-27 126.7 613 28.1
Prupe.6G247900 Prunus persica HOM05D002036 ORTHO05D001913 2.8e-26 124.4 604 27.6
Duzib128G0163 Durio zibethinus HOM05D002036 ORTHO05D001913 3.7e-26 124.0 598 28.4
Hma1.2p1_0111F.1_g053220 Hydrangea macrophylla HOM05D002036 ORTHO05D001913 4.8e-26 123.6 651 27.6
TAR633G1128 Trochodendron aralioides HOM05D002036 ORTHO05D001913 8.2e-26 122.9 525 29.5
Aqoxy4G03055 Aquilegia oxysepala HOM05D002036 ORTHO05D001913 1.4e-25 122.1 527 29.8
Atru.chr8.2482 Acer truncatum HOM05D002036 ORTHO05D001913 5.3e-25 120.2 518 28.6
FvH4_6g14620 Fragaria vesca HOM05D002036 ORTHO05D001913 5.3e-25 120.2 571 26.8
FAN14G3656 Fragaria x ananassa HOM05D002036 ORTHO05D001913 6.9e-25 119.8 571 26.8
Gohir.D09G154900 Gossypium hirsutum HOM05D002036 ORTHO05D001913 6.9e-25 119.8 495 28.7
Duzib093G0032 Durio zibethinus HOM05D002036 ORTHO05D001913 1.5e-24 118.6 639 27.9
HanXRQChr14g0453801 Helianthus annuus HOM05D002036 ORTHO05D001913 2.6e-24 117.9 521 28.4
Gorai.006G176300 Gossypium raimondii HOM05D002036 ORTHO05D001913 3.4e-24 117.5 505 28.7
Nn2g10515 Nelumbo nucifera HOM05D002036 ORTHO05D001913 3.4e-24 117.5 519 29.3
FAN05G4012 Fragaria x ananassa HOM05D002036 ORTHO05D001913 2.2e-23 114.8 552 27.0
CiPaw.10G141600 Carya illinoinensis HOM05D002036 ORTHO05D001913 5.0e-23 113.6 536 28.9
RcHm_v2.0_Chr3g0467721 Rosa chinensis HOM05D002036 ORTHO05D001913 5.0e-23 113.6 565 27.6
GSVIVG01025600001 Vitis vinifera HOM05D002036 ORTHO05D001913 6.5e-23 113.2 603 26.4
FAN02G2099 Fragaria x ananassa HOM05D002036 ORTHO05D001913 8.5e-23 112.8 555 26.7
Gohir.A09G159300 Gossypium hirsutum HOM05D002036 ORTHO05D001913 8.5e-23 112.8 518 28.0
Ciclev10011022m.g Citrus clementina HOM05D002036 ORTHO05D001913 1.1e-22 112.5 594 27.1
Thecc.05G046700 Theobroma cacao HOM05D002036 ORTHO05D001913 1.9e-22 111.7 637 27.0
COL.COLO4_09164 Corchorus olitorius HOM05D002036 ORTHO05D001913 3.2e-22 110.9 588 27.6
CANSAT49G0001 Cannabis sativa HOM05D002036 ORTHO05D001913 5.5e-22 110.2 427 30.4
MD12G1134200 Malus domestica HOM05D002036 ORTHO05D001913 7.2e-22 109.8 453 29.8
Nn2g12861 Nelumbo nucifera HOM05D002036 ORTHO05D001913 9.4e-22 109.4 635 25.4
Potri.006G213700 Populus trichocarpa HOM05D002036 ORTHO05D001913 9.4e-22 109.4 515 29.1
MD04G1118500 Malus domestica HOM05D002036 ORTHO05D001913 1.6e-21 108.6 461 29.1
Manes.08G076600 Manihot esculenta HOM05D002036 ORTHO05D001913 1.6e-21 108.6 349 30.9
FAN09G1592 Fragaria x ananassa HOM05D002036 ORTHO05D001913 2.1e-21 108.2 558 26.7
Gorai.009G423300 Gossypium raimondii HOM05D002036 ORTHO05D001913 7.9e-21 106.3 210 39.5
Gohir.D04G118200 Gossypium hirsutum HOM05D002036 ORTHO05D001913 1.4e-20 105.5 210 39.5
Potri.016G080200 Populus trichocarpa HOM05D002036 ORTHO05D001913 2.3e-20 104.8 532 27.6
vmacro20108 Vaccinium macrocarpon HOM05D002036 ORTHO05D001913 2.3e-20 104.8 604 27.0
ECA238G3635 Erigeron canadensis HOM05D002036 ORTHO05D001913 6.7e-20 103.2 574 26.7
MD12G1134400 Malus domestica HOM05D002036 ORTHO05D001913 8.8e-20 102.8 657 26.8
Gohir.A01G219300 Gossypium hirsutum HOM05D002036 ORTHO05D001913 2.0e-19 101.7 627 27.6
unitig_16.g32857 Utricularia gibba HOM05D003877 ORTHO05D004647 1.3e-18 99.0 402 29.4
CSS0017146 Camellia sinensis var. sinensis HOM05D002036 ORTHO05D001913 8.2e-18 96.3 552 28.4
CSS0035513 Camellia sinensis var. sinensis HOM05D002036 ORTHO05D001913 1.1e-17 95.9 552 28.3
PSO206G0030 Papaver somniferum HOM05D002036 ORTHO05D001913 3.1e-17 94.4 578 26.6
Gohir.D01G208400 Gossypium hirsutum HOM05D002036 ORTHO05D001913 5.3e-17 93.6 601 26.6
Dinv31404 Davidia involucrata HOM05D002036 ORTHO05D001913 9.1e-17 92.8 538 26.6
Phvul.001G171300 Phaseolus vulgaris HOM05D002036 ORTHO05D001913 1.5e-16 92.0 532 27.3
PSO339G0404 Papaver somniferum HOM05D002036 ORTHO05D001913 4.5e-16 90.5 575 26.8
Gorai.002G253500 Gossypium raimondii HOM05D002036 ORTHO05D001913 1.7e-15 88.6 627 26.3
THA.LOC104823434 Tarenaya hassleriana HOM05D002036 ORTHO05D001913 1.7e-15 88.6 448 26.8
Lalb_Chr21g0314431 Lupinus albus HOM05D002036 ORTHO05D001913 2.2e-15 88.2 406 28.6
Manes.09G085700 Manihot esculenta HOM05D002036 ORTHO05D001913 2.2e-15 88.2 343 29.4
Sabra16G0088100 Salix brachista HOM05D002036 ORTHO05D001913 2.9e-15 87.8 343 30.9
arahy.Tifrunner.gnm1.ann1.91Z2HD Arachis hypogaea HOM05D002036 ORTHO05D001913 6.5e-15 86.7 541 26.8
VMungo0720G0853 Vigna mungo HOM05D002036 ORTHO05D001913 6.5e-15 86.7 243 32.9
Gohir.A04G079050 Gossypium hirsutum HOM05D002036 ORTHO05D001913 1.1e-14 85.9 187 38.5
THA.LOC104806591 Tarenaya hassleriana HOM05D002036 ORTHO05D001913 1.4e-14 85.5 428 26.4
Hund24066 Selenicereus undatus HOM05D002036 ORTHO05D001913 1.9e-14 85.1 199 35.7
AUR62040988 Chenopodium quinoa HOM05D002036 ORTHO05D001913 2.5e-14 84.7 581 26.7
Lalb_Chr02g0153251 Lupinus albus HOM05D002036 ORTHO05D001913 2.5e-14 84.7 451 26.8
Sc01g0003870 Simmondsia chinensis HOM05D002036 ORTHO05D001913 7.2e-14 83.2 597 25.6
Phvul.007G159500 Phaseolus vulgaris HOM05D002036 ORTHO05D001913 1.2e-13 82.4 243 32.9
BraA07t29854Z Brassica rapa HOM05D002036 ORTHO05D001913 1.6e-13 82.0 208 31.2
CSS0018541 Camellia sinensis var. sinensis HOM05D002036 ORTHO05D001913 2.1e-13 81.6 520 26.7
BcaB02g07777 Brassica carinata HOM05D002036 ORTHO05D001913 8.0e-13 79.7 390 26.2
Glyma.03G173900 Glycine max HOM05D002036 ORTHO05D001913 8.0e-13 79.7 581 25.5
Glyma.13G133500 Glycine max HOM05D002036 ORTHO05D001913 8.0e-13 79.7 586 25.3
BolC4t25474H Brassica oleracea HOM05D002036 ORTHO05D001913 1.4e-12 79.0 201 33.3
Thhalv10010116m.g Eutrema salsugineum HOM05D002036 ORTHO05D001913 1.8e-12 78.6 382 26.4
Lj5g0022058 Lotus japonicus HOM05D002036 ORTHO05D001913 1.8e-12 78.6 525 26.5
Ca_09596_v3 Cicer arietinum L. HOM05D002036 ORTHO05D001913 2.3e-12 78.2 442 26.9
THA.LOC104805416 Tarenaya hassleriana HOM05D002036 ORTHO05D001913 3.0e-12 77.8 444 27.0
Lj1g0026714 Lotus japonicus HOM05D002036 ORTHO05D001913 3.9e-12 77.4 524 26.0
TWI74G0701 Tripterygium wilfordii HOM05D002036 ORTHO05D001913 3.9e-12 77.4 522 26.2
BolC6t37333H Brassica oleracea HOM05D002036 ORTHO05D001913 6.7e-12 76.6 383 26.9
Dinv25954 Davidia involucrata HOM05D002036 ORTHO05D001913 6.7e-12 76.6 203 36.0
BcaC08g44633 Brassica carinata HOM05D002036 ORTHO05D001913 1.1e-11 75.9 388 26.3
C06p21510 Brassica napus HOM05D002036 ORTHO05D001913 1.1e-11 75.9 388 26.3
Sp5g08790 Schrenkiella parvula HOM05D002036 ORTHO05D001913 2.0e-11 75.1 387 26.4
TPR.G23073 Trifolium pratense HOM05D002036 ORTHO05D001913 2.0e-11 75.1 300 29.0
unitig_26.g9208 Utricularia gibba HOM05D002036 ORTHO05D001913 2.0e-11 75.1 428 27.1
Aa31LG10G9580 Aethionema arabicum HOM05D002036 ORTHO05D001913 5.7e-11 73.6 310 27.1
A09p46550 Brassica napus HOM05D002036 ORTHO05D001913 5.7e-11 73.6 386 29.0
Lsat_1_v5_gn_2_111220 Lactuca sativa HOM05D002036 ORTHO05D001913 5.7e-11 73.6 512 25.6
VMungo1383G2286 Vigna mungo HOM05D002036 ORTHO05D001913 5.7e-11 73.6 415 27.2
BcaB02g08522 Brassica carinata HOM05D002036 ORTHO05D001913 7.4e-11 73.2 191 31.9
C04p39020 Brassica napus HOM05D002036 ORTHO05D001913 7.4e-11 73.2 193 34.2
Potri.010G211700 Populus trichocarpa HOM05D002036 ORTHO05D001913 7.4e-11 73.2 192 32.8
Ah.08g212270 Amaranthus hybridus HOM05D002036 ORTHO05D001913 1.3e-10 72.4 502 26.5
Eucgr.K03173 Eucalyptus grandis HOM05D002036 ORTHO05D001913 1.7e-10 72.0 348 29.0
Glyma.10G045600 Glycine max HOM05D002036 ORTHO05D001913 2.2e-10 71.6 596 24.8
BcaC07g39716 Brassica carinata HOM05D002036 ORTHO05D001913 2.8e-10 71.2 385 27.8
ClCG04G008520 Citrullus lanatus HOM05D002036 ORTHO05D001913 2.8e-10 71.2 522 23.4
unitig_8.g4096 Utricularia gibba HOM05D002036 ORTHO05D001913 3.7e-10 70.9 459 27.7
BolC8t50490H Brassica oleracea HOM05D002036 ORTHO05D001913 4.8e-10 70.5 385 27.8
AL5G34460 Arabidopsis lyrata HOM05D002036 ORTHO05D001913 1.1e-09 69.3 373 26.0
Medtr1g067570 Medicago truncatula HOM05D002036 ORTHO05D001913 1.1e-09 69.3 504 25.2
A07p21720 Brassica napus HOM05D002036 ORTHO05D001913 1.8e-09 68.6 377 26.5
BraA09t40120Z Brassica rapa HOM05D002036 ORTHO05D001913 2.4e-09 68.2 443 27.5
BcaC02g09154 Brassica carinata HOM05D002036 ORTHO05D001913 3.1e-09 67.8 392 27.0
Sed0012455 Sechium edule HOM05D002036 ORTHO05D001913 3.1e-09 67.8 505 25.1
Carub.0005s2012 Capsella rubella HOM05D002036 ORTHO05D001913 4.1e-09 67.4 555 23.8
TWI77G0326 Tripterygium wilfordii HOM05D002036 ORTHO05D001913 4.1e-09 67.4 606 23.4
CsaV3_4G024630 Cucumis sativus L. HOM05D002036 ORTHO05D001913 5.3e-09 67.0 649 24.2
Thhalv10016240m.g Eutrema salsugineum HOM05D002036 ORTHO05D001913 5.3e-09 67.0 412 26.0
Actinidia34342 Actinidia chinensis HOM05D002036 ORTHO05D001913 7.0e-09 66.6 199 29.6
MELO3C003096.2 Cucumis melo HOM05D002036 ORTHO05D001913 1.2e-08 65.9 650 24.2
AT3G53540 Arabidopsis thaliana HOM05D002036 ORTHO05D001913 1.6e-08 65.5 372 25.8
MBI05_g07856_MAGBIO Magnolia biondii HOM05D002036 ORTHO05D001913 1.6e-08 65.5 367 26.4
BcaB01g00265 Brassica carinata HOM05D002036 ORTHO05D001913 2.0e-08 65.1 379 26.9
EL10Ac7g17299 Beta vulgaris HOM05D002036 ORTHO05D001913 3.5e-08 64.3 556 23.4
C08p28880 Brassica napus HOM05D002036 ORTHO05D001913 5.9e-08 63.5 397 26.2
Sc20g0004420 Simmondsia chinensis HOM05D002036 ORTHO05D001913 5.9e-08 63.5 320 27.2
Sed0000481 Sechium edule HOM05D002036 ORTHO05D001913 1.0e-07 62.8 318 26.4
PGR004G2455 Punica granatum HOM05D002036 ORTHO05D001913 1.3e-07 62.4 403 26.3
AUR62042966 Chenopodium quinoa HOM05D002036 ORTHO05D001913 1.7e-07 62.0 392 26.8
Sed0002534 Sechium edule HOM05D002036 ORTHO05D001913 2.2e-07 61.6 498 23.3
unitig_749.g14258 Utricularia gibba HOM05D002036 ORTHO05D001913 2.2e-07 61.6 303 28.7
CARHR163450 Cardamine hirsuta HOM05D002036 ORTHO05D001913 3.8e-07 60.8 530 24.5
A04p06050 Brassica napus HOM05D002036 ORTHO05D001913 1.9e-06 58.5 571 25.2
Ah.08g212260 Amaranthus hybridus HOM05D002036 ORTHO05D001913 2.5e-06 58.2 369 27.4
Sabra10G0163700 Salix brachista HOM05D002036 ORTHO05D001913 2.5e-06 58.2 196 30.6
BraA04t16309Z Brassica rapa HOM05D002036 ORTHO05D001913 4.2e-06 57.4 568 24.6
ATR0759G019 Amborella trichopoda HOM05D002769 ORTHO05D001913 7.2e-06 56.6 428 25.5
Psat6g068640 Pisum sativum HOM05D002036 ORTHO05D001913 9.4e-06 56.2 446 24.0


User provided reference genes

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