Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01591 Erythranthe guttata HOM05D007531 ORTHO05D009484 7.3e-48 193.7 110 100.0
MSTRG.19432 Avicennia marina HOM05D007531 ORTHO05D009484 2.1e-31 139.0 110 76.4
SGA_v2.0_scaffold296G47570 Striga asiatica HOM05D007531 ORTHO05D009484 6.2e-31 137.5 111 72.1
Oeu028116.1 Olea europaea HOM05D007531 ORTHO05D009484 1.7e-28 129.4 110 69.1
SalBow6G4078 Salvia bowleyana HOM05D007531 ORTHO05D009484 2.2e-28 129.0 110 66.4
PGSC0003DMG400013576 Solanum tuberosum HOM05D007531 ORTHO05D009484 5.6e-24 114.4 108 64.8
Sopen07g022090 Solanum pennellii HOM05D007531 ORTHO05D009484 4.7e-23 111.3 108 62.0
Solyc07g042450.3 Solanum lycopersicum HOM05D007531 ORTHO05D009484 1.4e-22 109.8 108 61.1
unitig_578.g16405 Utricularia gibba HOM05D007531 ORTHO05D009484 4.0e-22 108.2 110 60.9
Nitab4.5_0001092g0060 Nicotiana tabacum HOM05D007531 ORTHO05D009484 6.8e-22 107.5 110 60.0
Nitab4.5_0001699g0060 Nicotiana tabacum HOM05D007531 ORTHO05D009484 1.3e-20 103.2 108 58.3
Nitab4.5_0007540g0040 Nicotiana tabacum HOM05D007531 ORTHO05D009484 1.3e-20 103.2 108 59.3
CAN.G660.22 Capsicum annuum HOM05D007531 ORTHO05D009484 1.7e-20 102.8 108 59.3
CSS0023587 Camellia sinensis var. sinensis HOM05D007531 ORTHO05D009484 1.9e-19 99.4 73 69.9
Peaxi162Scf00191g01018 Petunia axillaris HOM05D007531 ORTHO05D009484 1.9e-19 99.4 108 55.6
Cc06_g12620 Coffea canephora HOM05D007531 ORTHO05D009484 3.2e-19 98.6 112 55.4
Dinv42427 Davidia involucrata HOM05D007531 ORTHO05D009484 4.1e-19 98.2 110 52.7
Sc14g0000480 Simmondsia chinensis HOM05D007531 ORTHO05D009484 2.1e-18 95.9 89 61.8
CANSAT56G3767 Cannabis sativa HOM05D007531 ORTHO05D009484 3.5e-18 95.1 93 58.1
GSVIVG01015026001 Vitis vinifera HOM05D007531 ORTHO05D009484 1.7e-17 92.8 88 62.5
Actinidia39623 Actinidia chinensis HOM05D007531 ORTHO05D009484 3.0e-17 92.0 110 50.9
Duzib168G1872 Durio zibethinus HOM05D007531 ORTHO05D009484 5.1e-17 91.3 66 68.2
Thecc.09G071300 Theobroma cacao HOM05D007531 ORTHO05D009484 6.6e-17 90.9 66 68.2
DCAR_010491 Daucus carota HOM05D007531 ORTHO05D009484 8.7e-17 90.5 59 74.6
Gohir.D08G267900 Gossypium hirsutum HOM05D007531 ORTHO05D009484 1.1e-16 90.1 66 66.7
Gorai.004G285500 Gossypium raimondii HOM05D007531 ORTHO05D009484 1.1e-16 90.1 66 66.7
Duzib150G1567 Durio zibethinus HOM05D007531 ORTHO05D009484 4.3e-16 88.2 73 63.0
Rhsim05G0002900 Rhododendron simsii HOM05D007531 ORTHO05D009484 4.3e-16 88.2 58 70.7
COL.COLO4_21218 Corchorus olitorius HOM05D007531 ORTHO05D009484 5.6e-16 87.8 68 64.7
Gohir.A08G246700 Gossypium hirsutum HOM05D007531 ORTHO05D009484 5.6e-16 87.8 64 67.2
Cpa.g.sc82.75 Carica papaya HOM05D007531 ORTHO05D009484 7.3e-16 87.4 89 61.8
MD15G1222700 Malus domestica HOM05D007531 ORTHO05D009484 7.3e-16 87.4 77 61.0
EL10Ac8g18992 Beta vulgaris HOM05D007531 ORTHO05D009484 1.6e-15 86.3 110 50.0
Manes.03G043400 Manihot esculenta HOM05D007531 ORTHO05D009484 1.6e-15 86.3 96 53.1
Potri.006G137401 Populus trichocarpa HOM05D007531 ORTHO05D009484 1.6e-15 86.3 75 60.0
TAR626G0337 Trochodendron aralioides HOM05D007531 ORTHO05D009484 2.1e-15 85.9 73 61.6
Manes.16G092000 Manihot esculenta HOM05D007531 ORTHO05D009484 4.7e-15 84.7 66 63.6
ClCG11G000070 Citrullus lanatus HOM05D007531 ORTHO05D009484 6.2e-15 84.3 84 61.9
Prupe.7G193100 Prunus persica HOM05D007531 ORTHO05D009484 6.2e-15 84.3 110 50.0
Hma1.2p1_0519F.1_g171380 Hydrangea macrophylla HOM05D007531 ORTHO05D009484 2.4e-14 82.4 55 72.7
RcHm_v2.0_Chr2g0095821 Rosa chinensis HOM05D007531 ORTHO05D009484 3.1e-14 82.0 62 61.3
Carub.0001s1884 Capsella rubella HOM05D007531 ORTHO05D009484 4.0e-14 81.6 114 46.5
PGR042G0735 Punica granatum HOM05D007531 ORTHO05D009484 5.2e-14 81.3 80 57.5
TWI63G1700 Tripterygium wilfordii HOM05D007531 ORTHO05D009484 5.2e-14 81.3 95 51.6
AL1G31820 Arabidopsis lyrata HOM05D007531 ORTHO05D009484 1.5e-13 79.7 110 46.4
ECA246G1013 Erigeron canadensis HOM05D007531 ORTHO05D009484 1.5e-13 79.7 74 58.1
HPP92_021129 Vanilla planifolia HOM05D007531 ORTHO05D009484 1.5e-13 79.7 78 52.6
HPP92_021130 Vanilla planifolia HOM05D007531 ORTHO05D009484 1.5e-13 79.7 80 51.2
FAN23G0531 Fragaria x ananassa HOM05D007531 ORTHO05D009484 2.0e-13 79.3 86 54.7
CsaV3_5G027570 Cucumis sativus L. HOM05D007531 ORTHO05D009484 2.6e-13 79.0 82 58.5
Aa31LG7G3950 Aethionema arabicum HOM05D007531 ORTHO05D009484 4.4e-13 78.2 113 46.0
CDE06G0851 Ceratophyllum demersum HOM05D007531 ORTHO05D009484 4.4e-13 78.2 77 57.1
Sabra06G0107500 Salix brachista HOM05D007531 ORTHO05D009484 5.8e-13 77.8 46 76.1
THA.LOC104809045 Tarenaya hassleriana HOM05D007531 ORTHO05D009484 9.9e-13 77.0 110 49.1
Lsat_1_v5_gn_7_35440 Lactuca sativa HOM05D007531 ORTHO05D009484 1.3e-12 76.6 110 46.4
Dinv25515 Davidia involucrata HOM05D007531 ORTHO05D009484 2.2e-12 75.9 108 47.2
BcaB07g31940 Brassica carinata HOM05D007531 ORTHO05D009484 2.9e-12 75.5 105 43.8
BcaC07g38992 Brassica carinata HOM05D007531 ORTHO05D009484 2.9e-12 75.5 105 43.8
C05p17640 Brassica napus HOM05D007531 ORTHO05D009484 2.9e-12 75.5 59 64.4
Eucgr.H05011 Eucalyptus grandis HOM05D007531 ORTHO05D009484 2.9e-12 75.5 110 47.3
BolC5t30467H Brassica oleracea HOM05D007531 ORTHO05D009484 3.8e-12 75.1 62 61.3
FvH4_1g09260 Fragaria vesca HOM05D007531 ORTHO05D009484 3.8e-12 75.1 105 45.7
FAN19G1112 Fragaria x ananassa HOM05D007531 ORTHO05D009484 3.8e-12 75.1 105 45.7
Sp1g17150 Schrenkiella parvula HOM05D007531 ORTHO05D009484 3.8e-12 75.1 105 44.8
Medtr4g124770 Medicago truncatula HOM05D007531 ORTHO05D009484 4.9e-12 74.7 61 59.0
A06p15390 Brassica napus HOM05D007531 ORTHO05D009484 6.4e-12 74.3 59 62.7
BraA06t24652Z Brassica rapa HOM05D007531 ORTHO05D009484 6.4e-12 74.3 59 62.7
FAN26G1659 Fragaria x ananassa HOM05D007531 ORTHO05D009484 6.4e-12 74.3 105 43.8
FAN26G1806 Fragaria x ananassa HOM05D007531 ORTHO05D009484 6.4e-12 74.3 105 43.8
Atru.chr7.1757 Acer truncatum HOM05D007531 ORTHO05D009484 8.4e-12 73.9 93 50.5
AT1G19240 Arabidopsis thaliana HOM05D007531 ORTHO05D009484 8.4e-12 73.9 114 43.9
vmacro17085 Vaccinium macrocarpon HOM05D007531 ORTHO05D009484 8.4e-12 73.9 74 58.1
Ciclev10010006m.g Citrus clementina HOM05D007531 ORTHO05D009484 1.4e-11 73.2 99 47.5
QL11p002692 Quercus lobata HOM05D007531 ORTHO05D009484 1.9e-11 72.8 73 56.2
Aqoxy7G04136 Aquilegia oxysepala HOM05D007531 ORTHO05D009484 2.4e-11 72.4 85 48.2
MBI19_g38003_MAGBIO Magnolia biondii HOM05D007531 ORTHO05D009484 2.4e-11 72.4 78 46.2
Thhalv10009175m.g Eutrema salsugineum HOM05D007531 ORTHO05D009484 3.2e-11 72.0 114 44.7
Sed0019513 Sechium edule HOM05D007531 ORTHO05D009484 3.2e-11 72.0 47 70.2
arahy.Tifrunner.gnm1.ann1.ETL5CI Arachis hypogaea HOM05D007531 ORTHO05D009484 5.4e-11 71.2 73 53.4
arahy.Tifrunner.gnm1.ann1.J82KAY Arachis hypogaea HOM05D007531 ORTHO05D009484 9.3e-11 70.5 73 52.1
Phvul.004G046500 Phaseolus vulgaris HOM05D007531 ORTHO05D009484 9.3e-11 70.5 53 60.4
CARHR019840 Cardamine hirsuta HOM05D007531 ORTHO05D009484 1.6e-10 69.7 114 45.6
Psat0s2373g0160 Pisum sativum HOM05D007531 ORTHO05D009484 1.6e-10 69.7 53 58.5
Lj4g0024105 Lotus japonicus HOM05D007531 ORTHO05D009484 2.1e-10 69.3 71 52.1
Cfa002948 Carpinus fangiana HOM05D007531 ORTHO05D009484 3.5e-10 68.6 110 44.5
TPR.G12718 Trifolium pratense HOM05D007531 ORTHO05D009484 1.0e-09 67.0 81 46.9
Os01g0144700 Oryza sativa ssp. japonica HOM05D007531 ORTHO05D009484 1.3e-09 66.6 87 43.7
Glyma.17G046400 Glycine max HOM05D007531 ORTHO05D009484 1.5e-08 63.2 48 60.4
VMungo1215G2546 Vigna mungo HOM05D007531 ORTHO05D009484 2.5e-08 62.4 42 61.9
Phvul.003G128000 Phaseolus vulgaris HOM05D007531 ORTHO05D009484 3.3e-08 62.0 51 58.8
Glyma.13G113300 Glycine max HOM05D007531 ORTHO05D009484 7.3e-08 60.8 39 64.1
Lalb_Chr11g0074031 Lupinus albus HOM05D007531 ORTHO05D009484 7.3e-08 60.8 86 44.2
Gohir.D13G071750 Gossypium hirsutum HOM05D061539 ORTHO05D009484 3.1e-06 55.5 36 63.9


User provided reference genes

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