Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01402 Erythranthe guttata HOM05D004717 ORTHO05D005636 5.0e-108 394.4 198 100.0
MSTRG.7889 Avicennia marina HOM05D004717 ORTHO05D005636 2.7e-85 318.9 198 75.8
SGA_v2.0_scaffold8G04231 Striga asiatica HOM05D004717 ORTHO05D005636 3.5e-85 318.5 198 74.2
SGA_v2.0_scaffold62G21625 Striga asiatica HOM05D004717 ORTHO05D005636 4.6e-85 318.2 196 75.0
Oeu003437.1 Olea europaea HOM05D004717 ORTHO05D005636 1.9e-83 312.8 198 72.7
Oeu033041.1 Olea europaea HOM05D004717 ORTHO05D005636 2.1e-82 309.3 198 71.2
CAN.G274.13 Capsicum annuum HOM05D004717 ORTHO05D005636 3.6e-82 308.5 197 71.1
Cc11_g03470 Coffea canephora HOM05D004717 ORTHO05D005636 6.2e-82 307.8 198 70.7
Migut.E00157 Erythranthe guttata HOM05D004717 ORTHO05D005636 1.8e-81 306.2 199 73.4
Lj6P708T54 Lonicera japonica HOM05D004717 ORTHO05D005636 9.0e-81 303.9 198 69.2
vmacro15638 Vaccinium macrocarpon HOM05D004717 ORTHO05D005636 4.4e-80 301.6 197 68.0
Nitab4.5_0004979g0110 Nicotiana tabacum HOM05D004717 ORTHO05D005636 5.8e-80 301.2 197 70.6
Solyc04g009010.2 Solanum lycopersicum HOM05D004717 ORTHO05D005636 5.8e-80 301.2 198 69.2
PGSC0003DMG400011510 Solanum tuberosum HOM05D004717 ORTHO05D005636 1.3e-79 300.1 198 68.7
Rhsim02G0075200 Rhododendron simsii HOM05D004717 ORTHO05D005636 2.2e-79 299.3 198 66.7
Peaxi162Scf00681g00024 Petunia axillaris HOM05D004717 ORTHO05D005636 2.9e-79 298.9 197 68.5
TWI74G1267 Tripterygium wilfordii HOM05D004717 ORTHO05D005636 2.9e-79 298.9 198 69.2
CSS0046676 Camellia sinensis var. sinensis HOM05D004717 ORTHO05D005636 4.9e-79 298.1 196 67.9
Gohir.A12G132100 Gossypium hirsutum HOM05D004717 ORTHO05D005636 8.4e-79 297.4 198 67.2
Lj5g0015714 Lotus japonicus HOM05D004717 ORTHO05D005636 1.9e-78 296.2 198 66.2
Lalb_Chr24g0398391 Lupinus albus HOM05D004717 ORTHO05D005636 2.4e-78 295.8 198 67.2
Nitab4.5_0004808g0010 Nicotiana tabacum HOM05D004717 ORTHO05D005636 4.2e-78 295.0 195 68.2
RcHm_v2.0_Chr4g0446911 Rosa chinensis HOM05D004717 ORTHO05D005636 7.1e-78 294.3 198 67.7
Dinv02673 Davidia involucrata HOM05D004717 ORTHO05D005636 1.6e-77 293.1 197 66.5
Duzib132G0983 Durio zibethinus HOM05D004717 ORTHO05D005636 2.1e-77 292.7 196 67.9
Lsat_1_v5_gn_9_25720 Lactuca sativa HOM05D004717 ORTHO05D005636 2.1e-77 292.7 198 69.2
HanXRQChr08g0237151 Helianthus annuus HOM05D004717 ORTHO05D005636 6.0e-77 291.2 197 70.6
Prupe.1G348900 Prunus persica HOM05D004717 ORTHO05D005636 6.0e-77 291.2 198 66.2
FAN12G1282 Fragaria x ananassa HOM05D004717 ORTHO05D005636 7.9e-77 290.8 198 67.2
Phvul.004G144800 Phaseolus vulgaris HOM05D004717 ORTHO05D005636 7.9e-77 290.8 198 67.2
Medtr6g075160 Medicago truncatula HOM05D004717 ORTHO05D005636 1.7e-76 289.7 198 68.7
GSVIVG01038782001 Vitis vinifera HOM05D004717 ORTHO05D005636 1.7e-76 289.7 197 66.5
Gorai.008G146900 Gossypium raimondii HOM05D004717 ORTHO05D005636 2.3e-76 289.3 196 65.3
TPR.G28016 Trifolium pratense HOM05D004717 ORTHO05D005636 2.3e-76 289.3 198 68.7
CiPaw.06G062200 Carya illinoinensis HOM05D004717 ORTHO05D005636 3.0e-76 288.9 198 65.2
Hma1.2p1_0513F.1_g169470 Hydrangea macrophylla HOM05D004717 ORTHO05D005636 3.0e-76 288.9 197 67.0
PGR142G2311 Punica granatum HOM05D004717 ORTHO05D005636 3.0e-76 288.9 198 66.7
Sed0013821 Sechium edule HOM05D004717 ORTHO05D005636 3.0e-76 288.9 198 67.7
CiPaw.05G171400 Carya illinoinensis HOM05D004717 ORTHO05D005636 3.9e-76 288.5 198 68.2
MD16G1003900 Malus domestica HOM05D004717 ORTHO05D005636 3.9e-76 288.5 198 65.2
MELO3C022525.2 Cucumis melo HOM05D004717 ORTHO05D005636 5.1e-76 288.1 198 66.2
Eucgr.G02601 Eucalyptus grandis HOM05D004717 ORTHO05D005636 5.1e-76 288.1 198 65.7
CsaV3_6G005870 Cucumis sativus L. HOM05D004717 ORTHO05D005636 8.7e-76 287.3 198 66.2
Manes.08G039100 Manihot esculenta HOM05D004717 ORTHO05D005636 1.5e-75 286.6 197 63.5
Sed0025396 Sechium edule HOM05D004717 ORTHO05D005636 1.9e-75 286.2 197 65.5
MD13G1003500 Malus domestica HOM05D004717 ORTHO05D005636 3.3e-75 285.4 198 66.2
Potri.005G089500 Populus trichocarpa HOM05D004717 ORTHO05D005636 3.3e-75 285.4 198 65.7
Glyma.16G218800 Glycine max HOM05D004717 ORTHO05D005636 4.3e-75 285.0 198 64.6
Lj2g0014996 Lotus japonicus HOM05D004717 ORTHO05D005636 4.3e-75 285.0 198 64.1
Potri.007G074500 Populus trichocarpa HOM05D004717 ORTHO05D005636 4.3e-75 285.0 198 65.7
Thecc.02G155400 Theobroma cacao HOM05D004717 ORTHO05D005636 4.3e-75 285.0 196 64.8
unitig_8.g3169 Utricularia gibba HOM05D004717 ORTHO05D005636 5.6e-75 284.6 198 67.2
THA.LOC104800704 Tarenaya hassleriana HOM05D004717 ORTHO05D005636 7.3e-75 284.3 197 67.0
VMungo0464G0417 Vigna mungo HOM05D004717 ORTHO05D005636 9.6e-75 283.9 198 65.7
CiPaw.05G171500 Carya illinoinensis HOM05D004717 ORTHO05D005636 4.8e-74 281.6 198 65.2
Lj3g0022258 Lotus japonicus HOM05D004717 ORTHO05D005636 6.2e-74 281.2 198 63.6
arahy.Tifrunner.gnm1.ann1.TS1LPS Arachis hypogaea HOM05D004717 ORTHO05D005636 8.1e-74 280.8 198 65.2
Eucgr.G02666 Eucalyptus grandis HOM05D004717 ORTHO05D005636 8.1e-74 280.8 198 66.2
QL04p036464 Quercus lobata HOM05D004717 ORTHO05D005636 8.1e-74 280.8 196 66.3
QL04p036080 Quercus lobata HOM05D004717 ORTHO05D005636 1.4e-73 280.0 196 65.8
Psat1g123480 Pisum sativum HOM05D004717 ORTHO05D005636 1.8e-73 279.6 198 64.6
Sabra07G0063200 Salix brachista HOM05D004717 ORTHO05D005636 1.8e-73 279.6 197 65.0
Ah.01g024100 Amaranthus hybridus HOM05D004717 ORTHO05D005636 3.1e-73 278.9 198 63.6
EL10Ac9g21225 Beta vulgaris HOM05D004717 ORTHO05D005636 3.1e-73 278.9 198 64.1
arahy.Tifrunner.gnm1.ann1.8YZR55 Arachis hypogaea HOM05D004717 ORTHO05D005636 6.9e-73 277.7 198 64.1
Ciclev10016775m.g Citrus clementina HOM05D004717 ORTHO05D005636 9.0e-73 277.3 198 64.1
ECA247G4036 Erigeron canadensis HOM05D004717 ORTHO05D005636 9.0e-73 277.3 198 65.2
ClCG06G000120 Citrullus lanatus HOM05D004717 ORTHO05D005636 1.2e-72 276.9 189 66.1
TPR.G9035 Trifolium pratense HOM05D004717 ORTHO05D005636 1.2e-72 276.9 198 65.7
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 1.5e-72 276.6 197 65.5
Lj6P714T12 Lonicera japonica HOM05D004717 ORTHO05D005636 1.5e-72 276.6 183 66.7
C03p04250 Brassica napus HOM05D004717 ORTHO05D005636 2.0e-72 276.2 198 67.2
AUR62012906 Chenopodium quinoa HOM05D004717 ORTHO05D005636 2.0e-72 276.2 198 64.1
GSVIVG01026135001 Vitis vinifera HOM05D004717 ORTHO05D005636 4.5e-72 275.0 198 63.1
BolC3t12957H Brassica oleracea HOM05D004717 ORTHO05D005636 5.8e-72 274.6 198 66.7
Haze_11783 Corylus avellana HOM05D004717 ORTHO05D005636 7.6e-72 274.2 194 65.5
Thecc.05G241200 Theobroma cacao HOM05D004717 ORTHO05D005636 7.6e-72 274.2 186 67.7
AL6G18770 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 9.9e-72 273.9 198 66.7
AT5G23320 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 1.3e-71 273.5 197 67.0
Carub.0006s0723 Capsella rubella HOM05D004717 ORTHO05D005636 1.3e-71 273.5 198 67.7
AL6G34580 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 1.7e-71 273.1 197 66.5
Sc08g0003750 Simmondsia chinensis HOM05D004717 ORTHO05D005636 2.2e-71 272.7 196 64.3
Atru.chr11.1095 Acer truncatum HOM05D004717 ORTHO05D005636 2.9e-71 272.3 197 64.0
BraA03t09724Z Brassica rapa HOM05D004717 ORTHO05D005636 3.8e-71 271.9 198 66.2
Nn2g12497 Nelumbo nucifera HOM05D004717 ORTHO05D005636 3.8e-71 271.9 198 63.6
PGR142G4258 Punica granatum HOM05D004717 ORTHO05D005636 3.8e-71 271.9 196 63.3
AT5G08335 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 6.4e-71 271.2 198 65.2
Gohir.A11G227800 Gossypium hirsutum HOM05D004717 ORTHO05D005636 8.4e-71 270.8 184 66.3
A03p03770 Brassica napus HOM05D004717 ORTHO05D005636 1.1e-70 270.4 196 65.8
Gohir.D12G135700 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.4e-70 270.0 183 64.5
Aqoxy6G00094 Aquilegia oxysepala HOM05D004717 ORTHO05D005636 3.2e-70 268.9 197 60.4
Carub.0006s2109 Capsella rubella HOM05D004717 ORTHO05D005636 3.2e-70 268.9 197 64.0
Duzib177G0848 Durio zibethinus HOM05D004717 ORTHO05D005636 3.2e-70 268.9 186 66.7
Gohir.D11G240300 Gossypium hirsutum HOM05D004717 ORTHO05D005636 3.2e-70 268.9 184 66.3
Gorai.007G253700 Gossypium raimondii HOM05D004717 ORTHO05D005636 3.2e-70 268.9 184 66.3
GSVIVG01038778001 Vitis vinifera HOM05D004717 ORTHO05D005636 4.2e-70 268.5 198 62.6
DCAR_027608 Daucus carota HOM05D004717 ORTHO05D005636 5.5e-70 268.1 183 67.8
CARHR204740 Cardamine hirsuta HOM05D004717 ORTHO05D005636 9.3e-70 267.3 198 67.2
AUR62001133 Chenopodium quinoa HOM05D004717 ORTHO05D005636 1.2e-69 266.9 196 63.3
Thhalv10014725m.g Eutrema salsugineum HOM05D004717 ORTHO05D005636 1.2e-69 266.9 198 65.7
Lsat_1_v5_gn_5_170960 Lactuca sativa HOM05D004717 ORTHO05D005636 2.1e-69 266.2 198 60.6
BcaB01g05612 Brassica carinata HOM05D004717 ORTHO05D005636 4.6e-69 265.0 198 66.2
CDE02G0493 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 1.8e-68 263.1 198 60.1
PSO782G0831 Papaver somniferum HOM05D004717 ORTHO05D005636 1.8e-68 263.1 199 62.8
EL10Ac7g17906 Beta vulgaris HOM05D004717 ORTHO05D005636 2.3e-68 262.7 189 64.6
CANSAT11G2572 Cannabis sativa HOM05D004717 ORTHO05D005636 3.9e-68 261.9 199 59.8
CARHR190220 Cardamine hirsuta HOM05D004717 ORTHO05D005636 2.5e-67 259.2 197 62.9
Duzib106G0072 Durio zibethinus HOM05D004717 ORTHO05D005636 1.6e-66 256.5 186 63.4
SHI07248 Sapria himalayana HOM05D004717 ORTHO05D005636 1.8e-65 253.1 198 59.1
Ah.08g214600 Amaranthus hybridus HOM05D004717 ORTHO05D005636 3.1e-65 252.3 194 62.4
MBI14_g08135_MAGBIO Magnolia biondii HOM05D004717 ORTHO05D005636 6.9e-65 251.1 196 59.7
HanXRQChr01g0011051 Helianthus annuus HOM05D004717 ORTHO05D005636 9.0e-65 250.8 198 58.1
Sp6g34610 Schrenkiella parvula HOM05D004717 ORTHO05D005636 1.2e-64 250.4 178 68.5
Lj3P847T27 Lonicera japonica HOM05D004717 ORTHO05D005636 1.0e-63 247.3 183 63.9
Sc17g0002110 Simmondsia chinensis HOM05D004717 ORTHO05D005636 1.3e-63 246.9 191 63.4
Lalb_Chr16g0386851 Lupinus albus HOM05D004717 ORTHO05D005636 4.9e-63 245.0 196 59.2
HPP92_018371 Vanilla planifolia HOM05D004717 ORTHO05D005636 2.3e-60 236.1 189 58.7
Actinidia35903 Actinidia chinensis HOM05D004717 ORTHO05D005636 3.0e-60 235.7 183 60.7
Cpa.g.sc59.26 Carica papaya HOM05D004717 ORTHO05D005636 6.9e-57 224.6 196 55.6
PSO170G2864 Papaver somniferum HOM05D004717 ORTHO05D005636 1.5e-56 223.4 170 62.9
HanXRQChr17g0556721 Helianthus annuus HOM05D004717 ORTHO05D005636 4.5e-56 221.9 155 69.0
Aa31LG11G2780 Aethionema arabicum HOM05D004717 ORTHO05D005636 8.4e-55 217.6 144 69.4
DCAR_023472 Daucus carota HOM05D004717 ORTHO05D005636 3.2e-54 215.7 144 69.4
CDE04G3142 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 9.3e-54 214.2 169 58.6
AUR62011721 Chenopodium quinoa HOM05D004717 ORTHO05D005636 9.3e-54 214.2 143 65.7
Rhsim02G0074800 Rhododendron simsii HOM05D004717 ORTHO05D005636 1.2e-53 213.8 197 52.3
Pp3c3_35430 Physcomitrium patens HOM05D004717 ORTHO05D005636 1.3e-52 210.3 192 52.6
SMO117G0139 Selaginella moellendorffii HOM05D004717 ORTHO05D005636 3.0e-52 209.1 187 53.5
SalBow2G2042 Salvia bowleyana HOM05D004717 ORTHO05D005636 6.3e-50 201.4 199 54.3
ATR0580G192 Amborella trichopoda HOM05D004717 ORTHO05D005636 9.0e-49 197.6 144 59.0
Mapoly0062s0094 Marchantia polymorpha HOM05D004717 ORTHO05D005636 5.9e-48 194.9 198 48.5
Zm00001eb144100 Zea mays HOM05D004717 ORTHO05D005636 6.5e-47 191.4 156 55.1
Sopen04g004190 Solanum pennellii HOM05D004717 ORTHO05D005636 5.5e-46 188.3 114 71.9
COL.COLO4_20086 Corchorus olitorius HOM05D004717 ORTHO05D005636 9.1e-41 171.0 98 72.4
Glyma.09G169200 Glycine max HOM05D004717 ORTHO05D005636 3.8e-39 165.6 198 44.9
TAR381G0283 Trochodendron aralioides HOM05D004717 ORTHO05D005636 8.5e-39 164.5 126 59.5
MCO05G386 Micromonas commoda HOM05D004717 ORTHO05D005636 3.7e-34 149.1 191 44.0
Haze_27496 Corylus avellana HOM05D004717 ORTHO05D005636 8.2e-34 147.9 178 41.6
PRCOL_00002165 Prasinoderma coloniale HOM05D004717 ORTHO05D005636 6.5e-31 138.3 183 44.3
Cfa021666 Carpinus fangiana HOM05D004717 ORTHO05D005636 1.0e-23 114.4 185 34.1
SEGI_39005 Sequoiadendron giganteum HOM05D004717 ORTHO05D005636 2.9e-23 112.8 74 66.2
Hund05579 Selenicereus undatus HOM05D004717 ORTHO05D005636 2.7e-21 106.3 118 48.3
ECA247G3377 Erigeron canadensis HOM05D004717 ORTHO05D005636 3.6e-21 105.9 67 68.7
Ca_23673_v3 Cicer arietinum L. HOM05D004717 ORTHO05D005636 8.0e-21 104.8 120 45.8
AagrBONN_evm.TU.Sc2ySwM_344.2327 Anthoceros agrestis HOM05D004717 ORTHO05D005636 6.8e-20 101.7 113 48.7
AagrBONN_evm.TU.Sc2ySwM_117.4144 Anthoceros agrestis HOM05D004717 ORTHO05D005636 7.5e-19 98.2 112 49.1
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 4.8e-18 95.5 192 36.5
Os04g0602900 Oryza sativa ssp. japonica HOM05D004717 ORTHO05D005636 1.0e-15 87.8 71 52.1
Eucgr.D01405 Eucalyptus grandis HOM05D004717 ORTHO05D005636 1.3e-15 87.4 64 60.9
RhsimUnG0160700 Rhododendron simsii HOM05D004717 ORTHO05D005636 6.1e-13 78.6 58 62.1
Actinidia11311 Actinidia chinensis HOM05D004717 ORTHO05D005636 2.9e-07 59.7 43 58.1


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