Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01390 Erythranthe guttata HOM05D004123 ORTHO05D004768 3.1e-75 285.4 186 100.0
MSTRG.13535 Avicennia marina HOM05D004123 ORTHO05D004768 7.2e-32 141.4 190 51.1
Oeu043592.1 Olea europaea HOM05D004123 ORTHO05D004768 1.4e-30 137.1 199 49.2
MSTRG.844 Avicennia marina HOM05D004123 ORTHO05D004768 1.8e-30 136.7 197 52.3
SalBow8G0349 Salvia bowleyana HOM05D004123 ORTHO05D004768 3.5e-26 122.5 195 52.8
unitig_22.g6557 Utricularia gibba HOM05D004123 ORTHO05D004768 3.5e-26 122.5 203 45.3
Oeu034240.1 Olea europaea HOM05D004123 ORTHO05D004768 4.5e-26 122.1 197 43.1
SalBow8G0756 Salvia bowleyana HOM05D004123 ORTHO05D004768 6.1e-23 111.7 180 45.6
Cfa018590 Carpinus fangiana HOM05D004123 ORTHO05D004768 8.0e-23 111.3 201 40.8
Gohir.A04G098200 Gossypium hirsutum HOM05D004123 ORTHO05D004768 1.4e-22 110.5 192 43.8
Gohir.D04G137875 Gossypium hirsutum HOM05D004123 ORTHO05D004768 1.8e-22 110.2 193 43.5
Gorai.012G122600 Gossypium raimondii HOM05D004123 ORTHO05D004768 1.8e-22 110.2 193 43.5
unitig_8.g3254 Utricularia gibba HOM05D004123 ORTHO05D004768 1.8e-22 110.2 203 44.8
Thecc.02G229500 Theobroma cacao HOM05D004123 ORTHO05D004768 2.8e-20 102.8 197 41.6
unitig_747.g21201 Utricularia gibba HOM05D004123 ORTHO05D004768 6.3e-20 101.7 189 44.4
Nitab4.5_0000791g0080 Nicotiana tabacum HOM05D004123 ORTHO05D004768 3.1e-19 99.4 172 40.1
Duzib268G1624 Durio zibethinus HOM05D004123 ORTHO05D004768 1.2e-18 97.4 202 39.6
Actinidia14896 Actinidia chinensis HOM05D004123 ORTHO05D004768 2.7e-18 96.3 185 39.5
Cpa.g.sc350.1 Carica papaya HOM05D004123 ORTHO05D004768 3.5e-18 95.9 201 38.8
Haze_17490 Corylus avellana HOM05D004123 ORTHO05D004768 3.5e-18 95.9 211 37.0
Nn3g17856 Nelumbo nucifera HOM05D004123 ORTHO05D004768 3.5e-18 95.9 205 44.4
Nitab4.5_0003373g0030 Nicotiana tabacum HOM05D004123 ORTHO05D004768 4.5e-18 95.5 173 39.3
CiPaw.15G085900 Carya illinoinensis HOM05D004123 ORTHO05D004768 5.9e-18 95.1 173 39.3
vmacro10561 Vaccinium macrocarpon HOM05D004123 ORTHO05D004768 5.9e-18 95.1 165 44.2
QL01p041642 Quercus lobata HOM05D004123 ORTHO05D004768 7.8e-18 94.7 198 39.4
Duzib251G0145 Durio zibethinus HOM05D004123 ORTHO05D004768 1.3e-17 94.0 198 39.4
Phvul.007G027700 Phaseolus vulgaris HOM05D004123 ORTHO05D004768 1.7e-17 93.6 191 39.3
Rhsim09G0107600 Rhododendron simsii HOM05D004123 ORTHO05D004768 2.3e-17 93.2 165 46.1
Prupe.1G311900 Prunus persica HOM05D004123 ORTHO05D004768 2.9e-17 92.8 201 48.3
Potri.008G121200 Populus trichocarpa HOM05D004123 ORTHO05D004768 1.1e-16 90.9 190 40.5
TAR629G2125 Trochodendron aralioides HOM05D004946 ORTHO05D006101 1.9e-16 90.1 197 43.7
Dinv31634 Davidia involucrata HOM05D004123 ORTHO05D004768 4.3e-16 89.0 193 42.5
Duzib248G0829 Durio zibethinus HOM05D004123 ORTHO05D004768 7.3e-16 88.2 198 38.9
Lsat_1_v5_gn_8_40481 Lactuca sativa HOM05D004123 ORTHO05D004768 7.3e-16 88.2 167 40.1
HanXRQChr09g0252701 Helianthus annuus HOM05D004123 ORTHO05D004768 9.5e-16 87.8 164 37.8
Potri.010G124200 Populus trichocarpa HOM05D004123 ORTHO05D004768 9.5e-16 87.8 188 36.2
Manes.06G067400 Manihot esculenta HOM05D004123 ORTHO05D004768 1.2e-15 87.4 193 38.3
VMungo0720G2589 Vigna mungo HOM05D004123 ORTHO05D004768 6.1e-15 85.1 184 37.0
PGR119G1213 Punica granatum HOM05D004123 ORTHO05D004768 8.0e-15 84.7 168 39.9
CiPaw.16G065300 Carya illinoinensis HOM05D004123 ORTHO05D004768 1.0e-14 84.3 206 37.4
CsaV3_5G023110 Cucumis sativus L. HOM05D004123 ORTHO05D004768 1.4e-14 84.0 190 37.9
Sopen05g005180 Solanum pennellii HOM05D004123 ORTHO05D004768 1.4e-14 84.0 181 50.8
Manes.14G103000 Manihot esculenta HOM05D004123 ORTHO05D004768 3.1e-14 82.8 189 38.1
Sed0009095 Sechium edule HOM05D004123 ORTHO05D004768 4.0e-14 82.4 168 38.7
MELO3C003021.2 Cucumis melo HOM05D004123 ORTHO05D004768 5.2e-14 82.0 173 38.7
Solyc05g009380.4 Solanum lycopersicum HOM05D004123 ORTHO05D004768 5.2e-14 82.0 181 45.9
TPR.G18823 Trifolium pratense HOM05D004123 ORTHO05D004768 5.2e-14 82.0 205 37.6
FvH4_4g27300 Fragaria vesca HOM05D004123 ORTHO05D004768 8.9e-14 81.3 181 37.0
Medtr1g110710 Medicago truncatula HOM05D004123 ORTHO05D004768 8.9e-14 81.3 194 37.1
CDE12G0443 Ceratophyllum demersum HOM05D004123 ORTHO05D004768 1.5e-13 80.5 160 35.6
Lalb_Chr02g0145931 Lupinus albus HOM05D004123 ORTHO05D004768 2.6e-13 79.7 194 42.8
Lalb_Chr21g0308891 Lupinus albus HOM05D004123 ORTHO05D004768 2.6e-13 79.7 198 42.4
Lj6C757T7 Lonicera japonica HOM05D004123 ORTHO05D004768 5.8e-13 78.6 172 40.7
CAN.G610.78 Capsicum annuum HOM05D004123 ORTHO05D004768 9.8e-13 77.8 179 46.4
Cc11_g10070 Coffea canephora HOM05D004123 ORTHO05D004768 2.2e-12 76.6 189 34.9
HanXRQChr08g0213911 Helianthus annuus HOM05D004123 ORTHO05D004768 2.9e-12 76.3 160 37.5
Lj5g0020149 Lotus japonicus HOM05D004123 ORTHO05D004768 3.7e-12 75.9 196 40.3
TWI31G0276 Tripterygium wilfordii HOM05D004123 ORTHO05D004768 3.7e-12 75.9 200 37.5
Ciclev10018307m.g Citrus clementina HOM05D004123 ORTHO05D004768 8.3e-12 74.7 216 34.3
GSVIVG01011890001 Vitis vinifera HOM05D004123 ORTHO05D004768 8.3e-12 74.7 181 34.3
ClCG03G009600 Citrullus lanatus HOM05D004123 ORTHO05D004768 1.1e-11 74.3 168 38.1
TAR622G0492 Trochodendron aralioides HOM05D004123 ORTHO05D004768 1.4e-11 73.9 207 35.7
Aqoxy3G00286 Aquilegia oxysepala HOM05D004123 ORTHO05D004768 2.4e-11 73.2 218 36.7
Migut.E00347 Erythranthe guttata HOM05D004123 ORTHO05D004768 2.4e-11 73.2 46 80.4
TWI75G1885 Tripterygium wilfordii HOM05D004123 ORTHO05D004768 2.4e-11 73.2 197 34.5
Gohir.D02G170500 Gossypium hirsutum HOM05D004123 ORTHO05D004768 3.2e-11 72.8 165 38.2
SHI16201 Sapria himalayana HOM05D004123 ORTHO05D004768 3.2e-11 72.8 162 35.2
Gorai.005G191500 Gossypium raimondii HOM05D004123 ORTHO05D004768 4.1e-11 72.4 165 38.2
Sed0004295 Sechium edule HOM05D004123 ORTHO05D004768 4.1e-11 72.4 164 39.6
arahy.Tifrunner.gnm1.ann1.1XFG43 Arachis hypogaea HOM05D004123 ORTHO05D004768 7.0e-11 71.6 184 36.4
Eucgr.G02316 Eucalyptus grandis HOM05D004123 ORTHO05D004768 7.0e-11 71.6 174 45.4
Lsat_1_v5_gn_3_59041 Lactuca sativa HOM05D004123 ORTHO05D004768 7.0e-11 71.6 174 34.5
DCAR_026735 Daucus carota HOM05D004123 ORTHO05D004768 1.6e-10 70.5 166 38.0
Gohir.A03G147300 Gossypium hirsutum HOM05D004123 ORTHO05D004768 2.7e-10 69.7 165 37.6
Sabra08G0091900 Salix brachista HOM05D004123 ORTHO05D004768 2.7e-10 69.7 185 35.7
TAR374G0469 Trochodendron aralioides HOM05D004123 ORTHO05D004768 2.7e-10 69.7 170 37.1
FAN07G2244 Fragaria x ananassa HOM05D004123 ORTHO05D004768 3.5e-10 69.3 175 34.9
Dinv21080 Davidia involucrata HOM05D004123 ORTHO05D004768 4.6e-10 68.9 170 44.7
FAN12G0145 Fragaria x ananassa HOM05D004123 ORTHO05D004768 6.0e-10 68.6 176 34.1
FAN12G0921 Fragaria x ananassa HOM05D004123 ORTHO05D004768 6.0e-10 68.6 176 34.1
Glyma.10G273800 Glycine max HOM05D004123 ORTHO05D004768 6.0e-10 68.6 190 37.9
Lj5g0023256 Lotus japonicus HOM05D004123 ORTHO05D004768 7.8e-10 68.2 194 37.6
Ca_03055_v3 Cicer arietinum L. HOM05D004123 ORTHO05D004768 1.3e-09 67.4 169 43.2
MD13G1040900 Malus domestica HOM05D004123 ORTHO05D004768 1.3e-09 67.4 199 36.2
MD16G1042200 Malus domestica HOM05D004123 ORTHO05D004768 1.7e-09 67.0 196 38.3
Psat6g227440 Pisum sativum HOM05D004123 ORTHO05D004768 2.3e-09 66.6 170 35.9
Lalb_Chr10g0100051 Lupinus albus HOM05D004123 ORTHO05D004768 3.0e-09 66.2 195 38.5
PSO063G6205 Papaver somniferum HOM05D004123 ORTHO05D004768 1.9e-08 63.5 176 39.8
CSS0040364 Camellia sinensis var. sinensis HOM05D004123 ORTHO05D004768 7.3e-08 61.6 186 37.1
Lj2g0014688 Lotus japonicus HOM05D004123 ORTHO05D004768 2.8e-07 59.7 181 33.7
PSO782G4509 Papaver somniferum HOM05D004123 ORTHO05D004768 3.6e-07 59.3 173 36.4
arahy.Tifrunner.gnm1.ann1.U1U6XH Arachis hypogaea HOM05D004123 ORTHO05D004768 6.2e-07 58.5 183 35.5
Phvul.003G031000 Phaseolus vulgaris HOM05D004123 ORTHO05D004768 8.0e-07 58.2 196 42.3
Zm00001eb335100 Zea mays HOM05D004123 ORTHO05D004768 1.1e-06 57.8 161 31.1
Nn4g23857 Nelumbo nucifera HOM05D004123 ORTHO05D004768 1.8e-06 57.0 205 33.2
CANSAT01G1980 Cannabis sativa HOM05D004123 ORTHO05D004768 2.3e-06 56.6 176 38.6
SGA_v2.0_scaffold36G14538 Striga asiatica HOM05D004123 ORTHO05D004768 2.3e-06 56.6 184 31.5


User provided reference genes

Program Settings