Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 3.6e-163 578.2 291 100.0
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 1.2e-129 466.8 291 82.1
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 4.3e-124 448.4 278 81.3
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 5.3e-122 441.4 296 76.0
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 5.3e-122 441.4 296 76.0
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 4.8e-115 418.3 283 77.0
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 1.8e-114 416.4 283 76.7
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 7.7e-113 411.0 286 74.1
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 1.0e-112 410.6 283 74.2
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 8.5e-112 407.5 293 72.4
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 1.4e-111 406.8 292 72.3
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 3.2e-111 405.6 292 71.6
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 4.2e-111 405.2 303 71.0
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 1.2e-110 403.7 289 71.6
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 1.2e-110 403.7 280 73.9
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 2.1e-110 402.9 290 71.4
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.4e-109 400.2 292 71.2
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 1.8e-109 399.8 296 71.6
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 3.0e-109 399.1 253 79.1
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 1.5e-108 396.7 293 71.0
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 2.0e-108 396.4 291 69.4
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 4.3e-108 395.2 286 71.0
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 4.3e-108 395.2 293 70.6
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 5.7e-108 394.8 293 70.6
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 4.8e-107 391.7 292 70.5
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 6.3e-107 391.3 292 69.2
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 8.2e-107 391.0 243 79.4
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 2.4e-106 389.4 290 69.3
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 4.1e-106 388.7 292 68.5
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 5.3e-106 388.3 276 74.6
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 1.2e-105 387.1 290 71.0
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 1.5e-105 386.7 283 72.4
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.5e-105 386.7 293 71.3
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.5e-105 386.7 293 71.7
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 5.9e-105 384.8 288 71.9
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.3e-104 383.6 283 72.8
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 1.7e-104 383.3 292 67.8
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 1.9e-103 379.8 268 73.1
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 1.9e-103 379.8 290 69.3
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 7.2e-103 377.9 277 71.1
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 2.7e-102 375.9 305 64.9
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 7.9e-102 374.4 290 66.9
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 2.3e-101 372.9 299 65.2
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 3.0e-101 372.5 296 66.2
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 8.8e-101 370.9 302 64.9
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 1.1e-100 370.5 278 69.8
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 2.0e-100 369.8 288 70.5
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 3.3e-100 369.0 291 66.0
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 4.4e-100 368.6 276 69.2
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 4.4e-100 368.6 304 64.8
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 5.7e-100 368.2 249 73.5
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 1.3e-99 367.1 295 65.4
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 1.3e-99 367.1 277 67.9
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 3.7e-99 365.5 264 71.2
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 6.3e-99 364.8 285 68.1
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 1.4e-98 363.6 284 67.3
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 2.4e-98 362.8 238 76.5
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 5.3e-98 361.7 249 75.5
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 9.1e-98 360.9 267 70.8
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 2.6e-97 359.4 284 65.1
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 5.9e-97 358.2 286 64.3
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 2.9e-96 355.9 282 66.0
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 3.8e-96 355.5 294 65.6
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 6.5e-96 354.8 286 65.4
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 6.5e-96 354.8 299 62.5
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 1.4e-95 353.6 288 67.7
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 1.2e-94 350.5 307 64.2
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 4.7e-94 348.6 251 69.7
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 8.0e-94 347.8 262 67.2
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 3.9e-93 345.5 291 63.2
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 6.7e-93 344.7 271 69.4
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 6.7e-93 344.7 286 63.6
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 3.3e-92 342.4 292 61.6
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 6.3e-91 338.2 301 60.5
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 1.4e-90 337.0 247 68.4
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 1.4e-90 337.0 260 64.6
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 3.1e-90 335.9 253 70.4
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 3.5e-89 332.4 266 65.4
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 3.5e-89 332.4 278 63.7
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 3.5e-89 332.4 267 66.7
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 7.7e-89 331.3 233 70.0
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 1.3e-88 330.5 297 63.0
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 7.2e-87 324.7 267 62.5
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 2.7e-86 322.8 235 68.9
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 1.8e-85 320.1 224 74.1
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 1.5e-84 317.0 235 68.1
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 1.4e-82 310.5 200 77.5
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 3.1e-82 309.3 238 63.9
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 1.6e-81 307.0 256 61.7
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 6.1e-78 295.0 248 59.7
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 2.0e-76 290.0 261 59.4
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 3.4e-76 289.3 245 66.5
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 5.4e-74 282.0 249 63.1
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 5.5e-71 271.9 202 68.8
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 1.5e-68 263.8 296 52.7
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 5.7e-68 261.9 186 68.3
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 2.5e-63 246.5 230 54.3
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.5e-60 237.3 293 50.9
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 2.9e-59 233.0 234 51.3
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 9.5e-55 218.0 227 47.1
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 4.7e-46 189.1 279 43.4
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.7e-43 180.6 137 64.2
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 1.6e-41 174.1 238 40.8
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 3.3e-39 166.4 232 37.9
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 3.0e-32 143.3 246 36.2
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 1.1e-29 134.8 87 75.9
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 2.4e-29 133.7 135 54.8
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 5.3e-21 105.9 131 46.6
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 4.9e-19 99.4 84 57.1
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 3.0e-16 90.1 54 77.8
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.1e-13 81.6 94 48.9
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 4.0e-13 79.7 103 46.6
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 3.8e-11 73.2 61 59.0
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 1.2e-09 68.2 75 52.0
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 1.2e-09 68.2 75 52.0
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 3.5e-09 66.6 75 50.7
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 1.8e-08 64.3 53 52.8
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 8.7e-08 62.0 51 56.9
C03p46150 Brassica napus HOM05D024156 ORTHO05D027668 8.2e-06 55.5 57 54.4


User provided reference genes

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