Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01370 Erythranthe guttata HOM05D007009 ORTHO05D008451 5.8e-101 370.9 194 100.0
MSTRG.7846 Avicennia marina HOM05D007009 ORTHO05D008451 1.3e-63 246.9 209 67.9
SalBow2G0075 Salvia bowleyana HOM05D007009 ORTHO05D008451 3.8e-60 235.3 207 66.2
Cc11_g13910 Coffea canephora HOM05D007009 ORTHO05D008451 1.6e-45 186.8 173 59.0
Dinv31143 Davidia involucrata HOM05D007009 ORTHO05D008451 3.9e-44 182.2 221 52.5
Solyc05g006580.3 Solanum lycopersicum HOM05D007009 ORTHO05D008451 1.1e-43 180.6 178 53.4
CSS0013437 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 1.9e-43 179.9 210 52.9
Nitab4.5_0008607g0010 Nicotiana tabacum HOM05D007009 ORTHO05D008451 1.9e-43 179.9 216 48.6
PGSC0003DMG401022631 Solanum tuberosum HOM05D007009 ORTHO05D008451 1.9e-43 179.9 175 54.3
Actinidia08196 Actinidia chinensis HOM05D007009 ORTHO05D008451 4.3e-43 178.7 216 50.9
Hma1.2p1_0265F.1_g106360 Hydrangea macrophylla HOM05D007009 ORTHO05D008451 4.3e-43 178.7 202 52.5
Nitab4.5_0001030g0090 Nicotiana tabacum HOM05D007009 ORTHO05D008451 7.3e-43 177.9 216 47.7
Sopen05g002530 Solanum pennellii HOM05D007009 ORTHO05D008451 8.0e-42 174.5 175 52.6
TAR374G0768 Trochodendron aralioides HOM05D007009 ORTHO05D008451 8.0e-42 174.5 205 50.7
Nn4g22971 Nelumbo nucifera HOM05D007009 ORTHO05D008451 1.4e-41 173.7 162 57.4
SGA_v2.0_scaffold166G38305 Striga asiatica HOM05D007009 ORTHO05D008451 1.8e-41 173.3 164 59.8
Dinv24931 Davidia involucrata HOM05D000094 ORTHO05D002904 4.0e-41 172.2 175 57.1
CAN.G27.64 Capsicum annuum HOM05D007009 ORTHO05D008451 8.9e-41 171.0 200 51.0
Peaxi162Scf00828g00312 Petunia axillaris HOM05D007009 ORTHO05D008451 1.2e-40 170.6 204 50.5
Atru.chr11.1917 Acer truncatum HOM05D007009 ORTHO05D008451 1.5e-40 170.2 172 55.2
PSO832G0198 Papaver somniferum HOM05D007009 ORTHO05D008451 4.4e-40 168.7 191 50.8
COL.COLO4_36263 Corchorus olitorius HOM05D007009 ORTHO05D008451 7.5e-40 167.9 162 57.4
PSO591G0441 Papaver somniferum HOM05D007009 ORTHO05D008451 1.3e-39 167.2 214 46.7
Cfa009076 Carpinus fangiana HOM05D007009 ORTHO05D008451 1.7e-39 166.8 205 50.7
Eucgr.B03385 Eucalyptus grandis HOM05D007009 ORTHO05D008451 4.9e-39 165.2 176 54.5
GSVIVG01020129001 Vitis vinifera HOM05D007009 ORTHO05D008451 4.9e-39 165.2 179 53.1
Aqoxy3G03177 Aquilegia oxysepala HOM05D007009 ORTHO05D008451 1.1e-38 164.1 180 51.1
Thecc.02G237500 Theobroma cacao HOM05D007009 ORTHO05D008451 1.9e-38 163.3 192 49.5
Hund25306 Selenicereus undatus HOM05D007009 ORTHO05D008451 4.1e-38 162.2 194 51.0
TWI18G0515 Tripterygium wilfordii HOM05D007009 ORTHO05D008451 4.1e-38 162.2 198 51.0
Sc11g0001470 Simmondsia chinensis HOM05D007009 ORTHO05D008451 1.2e-37 160.6 201 46.3
Prupe.1G262900 Prunus persica HOM05D007009 ORTHO05D008451 2.0e-37 159.8 194 47.4
Duzib251G0800 Durio zibethinus HOM05D007009 ORTHO05D008451 4.6e-37 158.7 187 48.7
Medtr5g037120 Medicago truncatula HOM05D007009 ORTHO05D008451 1.0e-36 157.5 217 45.6
arahy.Tifrunner.gnm1.ann1.IMS4B0 Arachis hypogaea HOM05D007009 ORTHO05D008451 3.9e-36 155.6 226 45.1
C06p43850 Brassica napus HOM05D007009 ORTHO05D008451 8.6e-36 154.5 171 49.7
unitig_8.g2944 Utricularia gibba HOM05D007009 ORTHO05D008451 8.6e-36 154.5 163 55.2
arahy.Tifrunner.gnm1.ann1.8B6YVA Arachis hypogaea HOM05D007009 ORTHO05D008451 1.1e-35 154.1 226 44.7
Aa31LG4G10880 Aethionema arabicum HOM05D007009 ORTHO05D008451 1.5e-35 153.7 183 47.5
CANSAT01G1662 Cannabis sativa HOM05D007009 ORTHO05D008451 1.9e-35 153.3 175 49.1
ClCG05G024860 Citrullus lanatus HOM05D007009 ORTHO05D008451 1.9e-35 153.3 173 53.2
Ah.03g132140 Amaranthus hybridus HOM05D007009 ORTHO05D008451 3.3e-35 152.5 195 45.6
BolC6t39457H Brassica oleracea HOM05D007009 ORTHO05D008451 4.3e-35 152.1 174 48.3
AUR62026539 Chenopodium quinoa HOM05D007009 ORTHO05D008451 7.3e-35 151.4 194 47.4
Lalb_Chr05g0217381 Lupinus albus HOM05D007009 ORTHO05D008451 7.3e-35 151.4 205 43.4
RcHm_v2.0_Chr4g0444991 Rosa chinensis HOM05D007009 ORTHO05D008451 9.5e-35 151.0 195 47.2
CsaV3_5G032050 Cucumis sativus L. HOM05D007009 ORTHO05D008451 1.2e-34 150.6 208 49.5
Sp5g25090 Schrenkiella parvula HOM05D007009 ORTHO05D008451 1.2e-34 150.6 173 48.0
Sed0027578 Sechium edule HOM05D007009 ORTHO05D008451 1.6e-34 150.2 174 50.0
Rhsim12G0053000 Rhododendron simsii HOM05D007009 ORTHO05D008451 2.8e-34 149.4 174 50.0
FAN17G0686 Fragaria x ananassa HOM05D007009 ORTHO05D008451 3.6e-34 149.1 171 49.7
Glyma.01G038700 Glycine max HOM05D007009 ORTHO05D008451 3.6e-34 149.1 178 47.8
Glyma.02G026000 Glycine max HOM05D007009 ORTHO05D008451 3.6e-34 149.1 178 47.8
PGR102G0074 Punica granatum HOM05D007009 ORTHO05D008451 4.7e-34 148.7 207 46.9
Ciclev10032750m.g Citrus clementina HOM05D007009 ORTHO05D008451 6.2e-34 148.3 172 51.2
FAN07G0981 Fragaria x ananassa HOM05D007009 ORTHO05D008451 6.2e-34 148.3 192 46.9
Gohir.A05G320100 Gossypium hirsutum HOM05D007009 ORTHO05D008451 6.2e-34 148.3 184 50.5
FvH4_4g35380 Fragaria vesca HOM05D007009 ORTHO05D008451 8.1e-34 147.9 192 46.9
FAN12G0678 Fragaria x ananassa HOM05D007009 ORTHO05D008451 8.1e-34 147.9 192 46.9
FAN22G1672 Fragaria x ananassa HOM05D007009 ORTHO05D008451 2.3e-33 146.4 192 46.9
Gohir.D05G322400 Gossypium hirsutum HOM05D007009 ORTHO05D008451 4.0e-33 145.6 186 49.5
THA.LOC104808792 Tarenaya hassleriana HOM05D007009 ORTHO05D008451 4.0e-33 145.6 194 43.8
Thhalv10019139m.g Eutrema salsugineum HOM05D007009 ORTHO05D008451 5.2e-33 145.2 177 48.0
Gorai.009G346000 Gossypium raimondii HOM05D007009 ORTHO05D008451 5.2e-33 145.2 186 49.5
Lj2g0006218 Lotus japonicus HOM05D007009 ORTHO05D008451 1.2e-32 144.1 174 48.3
MD16G1083100 Malus domestica HOM05D007009 ORTHO05D008451 1.2e-32 144.1 201 46.8
Manes.01G193800 Manihot esculenta HOM05D007009 ORTHO05D008451 1.2e-32 144.1 202 46.5
Potri.010G039466 Populus trichocarpa HOM05D007009 ORTHO05D008451 2.6e-32 142.9 161 50.9
TPR.G26720 Trifolium pratense HOM05D007009 ORTHO05D008451 3.4e-32 142.5 163 50.3
CiPaw.06G077800 Carya illinoinensis HOM05D007009 ORTHO05D008451 4.4e-32 142.1 175 48.6
BcaC08g46448 Brassica carinata HOM05D007009 ORTHO05D008451 1.3e-31 140.6 174 46.6
Potri.008G191700 Populus trichocarpa HOM05D007009 ORTHO05D008451 6.4e-31 138.3 172 47.7
QL03p067658 Quercus lobata HOM05D007009 ORTHO05D008451 8.3e-31 137.9 215 43.7
HanXRQChr08g0209091 Helianthus annuus HOM05D007009 ORTHO05D008451 1.1e-30 137.5 161 48.4
CiPaw.05G143700 Carya illinoinensis HOM05D007009 ORTHO05D008451 1.4e-30 137.1 175 45.7
Carub.0002s1666 Capsella rubella HOM05D007009 ORTHO05D008451 1.9e-30 136.7 169 46.2
Lj6A798T55 Lonicera japonica HOM05D007009 ORTHO05D008451 3.2e-30 136.0 122 59.0
Ca_15204_v3 Cicer arietinum L. HOM05D007009 ORTHO05D008451 1.6e-29 133.7 152 53.3
BcaB03g14776 Brassica carinata HOM05D007009 ORTHO05D008451 1.7e-28 130.2 184 45.1
VMungo1215G0662 Vigna mungo HOM05D007009 ORTHO05D008451 2.3e-28 129.8 167 48.5
AT1G69980 Arabidopsis thaliana HOM05D007009 ORTHO05D008451 3.0e-28 129.4 198 41.4
CARHR063080 Cardamine hirsuta HOM05D007009 ORTHO05D008451 3.9e-28 129.0 198 41.9
Duzib268G1291 Durio zibethinus HOM05D007009 ORTHO05D008451 5.1e-28 128.6 123 57.7
Os09g0560400 Oryza sativa ssp. japonica HOM05D007009 ORTHO05D008451 5.1e-28 128.6 158 45.6
AL2G29220 Arabidopsis lyrata HOM05D007009 ORTHO05D008451 3.3e-27 125.9 169 43.8
vmacro01210 Vaccinium macrocarpon HOM05D007009 ORTHO05D008451 4.3e-27 125.6 283 35.3
Zm00001eb104690 Zea mays HOM05D007009 ORTHO05D008451 5.6e-27 125.2 169 43.8
Haze_12109 Corylus avellana HOM05D007009 ORTHO05D008451 1.2e-26 124.0 193 44.0
DCAR_026574 Daucus carota HOM05D007009 ORTHO05D008451 2.8e-26 122.9 146 48.6
Sabra10G0027300 Salix brachista HOM05D007009 ORTHO05D008451 8.1e-26 121.3 241 37.3
EL10Ac6g13085 Beta vulgaris HOM05D007009 ORTHO05D008451 1.1e-25 120.9 158 44.9
A07p36430 Brassica napus HOM05D007009 ORTHO05D008451 6.8e-25 118.2 195 42.1
MELO3C012041.2 Cucumis melo HOM05D007009 ORTHO05D008451 1.2e-24 117.5 197 43.7
Psat2g116400 Pisum sativum HOM05D007009 ORTHO05D008451 2.6e-24 116.3 133 50.4
Cpa.g.sc5.312 Carica papaya HOM05D007009 ORTHO05D008451 3.4e-24 115.9 140 53.6
Lsat_1_v5_gn_8_161781 Lactuca sativa HOM05D007009 ORTHO05D008451 9.9e-24 114.4 156 44.2
ECA233G5592 Erigeron canadensis HOM05D007009 ORTHO05D008451 6.4e-23 111.7 146 49.3
Mapoly0049s0134 Marchantia polymorpha HOM05D007009 ORTHO05D008451 1.2e-21 107.5 154 39.6
AUR62039445 Chenopodium quinoa HOM05D007009 ORTHO05D008451 1.5e-19 100.5 131 46.6
Phvul.002G078700 Phaseolus vulgaris HOM05D007009 ORTHO05D008451 1.2e-18 97.4 175 37.7
BcaB03g14779 Brassica carinata HOM05D007009 ORTHO05D008451 8.1e-18 94.7 137 45.3
CDE10G1217 Ceratophyllum demersum HOM05D007009 ORTHO05D008451 1.3e-15 87.4 147 42.9
MBI15_g31419_MAGBIO Magnolia biondii HOM05D007009 ORTHO05D008451 2.1e-13 80.1 102 51.0
Pp3c4_16120 Physcomitrium patens HOM05D007009 ORTHO05D008451 2.1e-13 80.1 165 35.2
BolC8t48483H Brassica oleracea HOM05D007009 ORTHO05D008451 7.3e-11 71.6 47 66.0
C03p84900 Brassica napus HOM05D000455 ORTHO05D008451 1.1e-09 67.8 71 52.1
BolC3t20782H Brassica oleracea HOM05D000455 ORTHO05D008451 1.1e-09 67.8 71 52.1
CSS0007469 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 3.4e-08 62.8 72 48.6


User provided reference genes

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