Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01342 Erythranthe guttata HOM05D004218 ORTHO05D004938 1.6e-211 739.2 370 100.0
MSTRG.7824 Avicennia marina HOM05D004218 ORTHO05D004938 5.4e-164 581.3 356 81.2
SGA_v2.0_scaffold302G47864 Striga asiatica HOM05D004218 ORTHO05D004938 3.3e-153 545.4 363 76.3
Lj6A794T99 Lonicera japonica HOM05D004218 ORTHO05D004938 3.1e-143 512.3 375 69.9
PGSC0003DMG400017643 Solanum tuberosum HOM05D004218 ORTHO05D004938 3.4e-142 508.8 379 67.8
Dinv34202 Davidia involucrata HOM05D004218 ORTHO05D004938 5.8e-142 508.1 300 79.7
GSVIVG01020072001 Vitis vinifera HOM05D004218 ORTHO05D004938 5.0e-141 505.0 309 78.0
Hma1.2p1_1545F.1_g289920 Hydrangea macrophylla HOM05D004218 ORTHO05D004938 8.4e-141 504.2 359 69.4
Sopen05g003030 Solanum pennellii HOM05D004218 ORTHO05D004938 1.9e-140 503.1 323 74.6
Actinidia31179 Actinidia chinensis HOM05D004218 ORTHO05D004938 2.5e-140 502.7 371 69.0
CAN.G279.12 Capsicum annuum HOM05D004218 ORTHO05D004938 4.2e-140 501.9 364 69.2
Solyc05g007060.4 Solanum lycopersicum HOM05D004218 ORTHO05D004938 5.5e-140 501.5 378 67.5
CSS0011407 Camellia sinensis var. sinensis HOM05D004218 ORTHO05D004938 1.2e-139 500.4 355 69.3
TAR374G0431 Trochodendron aralioides HOM05D004218 ORTHO05D004938 1.6e-139 500.0 363 68.9
Cc11_g13440 Coffea canephora HOM05D004218 ORTHO05D004938 3.5e-139 498.8 325 74.8
Nn3g17132 Nelumbo nucifera HOM05D004218 ORTHO05D004938 3.5e-139 498.8 361 69.3
Rhsim12G0057400 Rhododendron simsii HOM05D004218 ORTHO05D004938 6.1e-139 498.0 344 71.8
Cfa009032 Carpinus fangiana HOM05D004218 ORTHO05D004938 6.7e-138 494.6 367 68.9
QL03p065637 Quercus lobata HOM05D004218 ORTHO05D004938 8.7e-138 494.2 363 68.6
vmacro01228 Vaccinium macrocarpon HOM05D004218 ORTHO05D004938 4.8e-136 488.4 397 63.5
Prupe.1G268000 Prunus persica HOM05D004218 ORTHO05D004938 6.3e-136 488.0 381 65.1
Eucgr.G02550 Eucalyptus grandis HOM05D004218 ORTHO05D004938 8.2e-136 487.6 348 70.4
AUR62026251 Chenopodium quinoa HOM05D004218 ORTHO05D004938 6.9e-135 484.6 302 75.5
Lj2g0000105 Lotus japonicus HOM05D004218 ORTHO05D004938 1.2e-134 483.8 362 66.3
unitig_749.g13251 Utricularia gibba HOM05D004218 ORTHO05D004938 2.0e-134 483.0 361 69.8
MD16G1078500 Malus domestica HOM05D004218 ORTHO05D004938 1.0e-133 480.7 382 63.1
Peaxi162Scf00209g00319 Petunia axillaris HOM05D004218 ORTHO05D004938 1.7e-133 479.9 302 76.5
Ciclev10031724m.g Citrus clementina HOM05D004218 ORTHO05D004938 2.2e-133 479.6 366 65.8
Thecc.02G354900 Theobroma cacao HOM05D004218 ORTHO05D004938 2.9e-133 479.2 347 68.0
FAN22G1204 Fragaria x ananassa HOM05D004218 ORTHO05D004938 3.8e-133 478.8 350 68.6
Lalb_Chr17g0340391 Lupinus albus HOM05D004218 ORTHO05D004938 3.8e-133 478.8 353 66.0
PGR119G2468 Punica granatum HOM05D004218 ORTHO05D004938 6.5e-133 478.0 364 65.7
RcHm_v2.0_Chr4g0440591 Rosa chinensis HOM05D004218 ORTHO05D004938 1.1e-132 477.2 350 68.0
COL.COLO4_07925 Corchorus olitorius HOM05D004218 ORTHO05D004938 1.4e-132 476.9 344 68.0
Manes.05G096800 Manihot esculenta HOM05D004218 ORTHO05D004938 2.5e-132 476.1 372 64.5
TWI18G0549 Tripterygium wilfordii HOM05D004218 ORTHO05D004938 2.5e-132 476.1 361 66.8
DCAR_027386 Daucus carota HOM05D004218 ORTHO05D004938 7.2e-132 474.6 318 70.1
Hund25269 Selenicereus undatus HOM05D004218 ORTHO05D004938 7.2e-132 474.6 318 70.4
CsaV3_6G036150 Cucumis sativus L. HOM05D004218 ORTHO05D004938 1.6e-131 473.4 341 68.6
HanXRQChr08g0209171 Helianthus annuus HOM05D004218 ORTHO05D004938 1.6e-131 473.4 319 71.5
Duzib248G0205 Durio zibethinus HOM05D004218 ORTHO05D004938 2.7e-131 472.6 302 73.5
CANSAT64G2557 Cannabis sativa HOM05D004218 ORTHO05D004938 3.6e-131 472.2 304 73.4
Gohir.D13G068200 Gossypium hirsutum HOM05D004218 ORTHO05D004938 3.6e-131 472.2 322 70.8
Phvul.002G066300 Phaseolus vulgaris HOM05D004218 ORTHO05D004938 4.6e-131 471.9 361 65.4
Cpa.g.sc5.274 Carica papaya HOM05D004218 ORTHO05D004938 6.1e-131 471.5 305 73.8
Sed0012992 Sechium edule HOM05D004218 ORTHO05D004938 7.9e-131 471.1 358 68.2
Lsat_1_v5_gn_8_54121 Lactuca sativa HOM05D004218 ORTHO05D004938 2.3e-130 469.5 316 71.5
PSO478G0406 Papaver somniferum HOM05D004218 ORTHO05D004938 3.0e-130 469.2 361 66.8
Gorai.013G077700 Gossypium raimondii HOM05D004218 ORTHO05D004938 5.1e-130 468.4 322 70.5
Dinv24956 Davidia involucrata HOM05D004218 ORTHO05D004938 8.8e-130 467.6 344 68.0
CiPaw.05G139700 Carya illinoinensis HOM05D004218 ORTHO05D004938 1.1e-129 467.2 290 76.2
PSO017G6443 Papaver somniferum HOM05D004218 ORTHO05D004938 1.5e-129 466.8 361 66.2
Sc14g0008380 Simmondsia chinensis HOM05D004218 ORTHO05D004938 1.5e-129 466.8 366 65.8
FAN17G0090 Fragaria x ananassa HOM05D004218 ORTHO05D004938 2.0e-129 466.5 303 74.6
Medtr5g038460 Medicago truncatula HOM05D004218 ORTHO05D004938 9.7e-129 464.2 368 63.0
Ca_04743_v3 Cicer arietinum L. HOM05D004218 ORTHO05D004938 1.3e-128 463.8 307 72.0
FAN12G1121 Fragaria x ananassa HOM05D004218 ORTHO05D004938 1.3e-128 463.8 357 66.1
VMungo1215G2729 Vigna mungo HOM05D004218 ORTHO05D004938 1.3e-128 463.8 366 63.7
EL10Ac6g13149 Beta vulgaris HOM05D004218 ORTHO05D004938 2.8e-128 462.6 360 65.3
MELO3C026498.2 Cucumis melo HOM05D004218 ORTHO05D004938 3.7e-128 462.2 325 70.2
Ah.01g005530 Amaranthus hybridus HOM05D004218 ORTHO05D004938 6.3e-128 461.5 301 72.4
Aqoxy3G03270 Aquilegia oxysepala HOM05D004218 ORTHO05D004938 1.8e-127 459.9 362 63.5
Glyma.02G021600 Glycine max HOM05D004218 ORTHO05D004938 3.4e-126 455.7 368 62.2
CARHR006730 Cardamine hirsuta HOM05D004218 ORTHO05D004938 4.5e-126 455.3 362 63.0
AL1G17150 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 7.7e-126 454.5 319 67.7
AT1G07040 Arabidopsis thaliana HOM05D004218 ORTHO05D004938 1.3e-125 453.8 362 63.0
TPR.G13761 Trifolium pratense HOM05D004218 ORTHO05D004938 1.7e-125 453.4 361 61.2
Potri.008G194800 Populus trichocarpa HOM05D004218 ORTHO05D004938 2.9e-125 452.6 298 73.2
THA.LOC104822930 Tarenaya hassleriana HOM05D004218 ORTHO05D004938 2.9e-125 452.6 336 65.5
ATR1120G161 Amborella trichopoda HOM05D004218 ORTHO05D004938 1.4e-124 450.3 369 62.1
Thhalv10007958m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 2.5e-124 449.5 364 60.2
Carub.0001s0633 Capsella rubella HOM05D004218 ORTHO05D004938 4.2e-124 448.7 319 66.8
Os10g0463800 Oryza sativa ssp. japonica HOM05D004218 ORTHO05D004938 4.2e-124 448.7 339 66.1
Sabra08G0148000 Salix brachista HOM05D004218 ORTHO05D004938 9.4e-124 447.6 327 68.2
Gohir.A13G052700 Gossypium hirsutum HOM05D004218 ORTHO05D004938 1.6e-123 446.8 377 60.7
Aa31LG7G8130 Aethionema arabicum HOM05D004218 ORTHO05D004938 2.1e-123 446.4 315 66.7
BolC5t29284H Brassica oleracea HOM05D004218 ORTHO05D004938 2.1e-123 446.4 377 58.9
Sp1g05760 Schrenkiella parvula HOM05D004218 ORTHO05D004938 2.1e-123 446.4 363 60.3
A10p05580 Brassica napus HOM05D004218 ORTHO05D004938 2.7e-123 446.0 319 66.1
BraA10t42819Z Brassica rapa HOM05D004218 ORTHO05D004938 2.7e-123 446.0 319 66.1
Psat0s3244g0040 Pisum sativum HOM05D004218 ORTHO05D004938 3.6e-123 445.7 361 61.2
ECA236G4940 Erigeron canadensis HOM05D004218 ORTHO05D004938 7.9e-123 444.5 312 69.6
Zm00001eb046510 Zea mays HOM05D004218 ORTHO05D004938 1.4e-122 443.7 323 66.3
arahy.Tifrunner.gnm1.ann1.VAP5EU Arachis hypogaea HOM05D004218 ORTHO05D004938 3.0e-122 442.6 314 67.5
arahy.Tifrunner.gnm1.ann1.08CHDU Arachis hypogaea HOM05D004218 ORTHO05D004938 2.6e-121 439.5 314 67.2
SalBow2G1790 Salvia bowleyana HOM05D004218 ORTHO05D004938 7.4e-121 438.0 270 77.0
SalBow2G2061 Salvia bowleyana HOM05D004218 ORTHO05D004938 7.4e-121 438.0 270 77.0
HPP92_000630 Vanilla planifolia HOM05D004218 ORTHO05D004938 1.7e-120 436.8 348 61.2
ClCG08G009010 Citrullus lanatus HOM05D004218 ORTHO05D004938 4.8e-120 435.3 433 55.0
Nitab4.5_0009649g0010 Nicotiana tabacum HOM05D004218 ORTHO05D004938 1.1e-119 434.1 384 60.7
CDE06G2220 Ceratophyllum demersum HOM05D004218 ORTHO05D004938 1.4e-119 433.7 319 66.1
Nitab4.5_0009146g0020 Nicotiana tabacum HOM05D004218 ORTHO05D004938 2.1e-115 419.9 385 60.5
SEGI_07096 Sequoiadendron giganteum HOM05D004218 ORTHO05D004938 7.0e-111 404.8 362 57.5
C05p05130 Brassica napus HOM05D004218 ORTHO05D004938 5.9e-110 401.7 347 58.2
FAN07G0325 Fragaria x ananassa HOM05D004218 ORTHO05D004938 1.6e-107 393.7 252 75.8
Pp3c14_9960 Physcomitrium patens HOM05D004218 ORTHO05D004938 5.5e-100 368.6 289 61.9
Mapoly0004s0239 Marchantia polymorpha HOM05D004218 ORTHO05D004938 1.0e-98 364.4 307 58.6
AagrBONN_evm.TU.Sc2ySwM_362.1084 Anthoceros agrestis HOM05D004218 ORTHO05D004938 1.4e-98 364.0 280 61.4
AUR62026441 Chenopodium quinoa HOM05D004218 ORTHO05D004938 9.8e-97 357.8 289 62.3
Atru.chr11.1849 Acer truncatum HOM05D004218 ORTHO05D004938 3.7e-96 355.9 219 74.4
BraA07t29096Z Brassica rapa HOM05D004218 ORTHO05D004938 4.5e-94 349.0 297 55.9
Thhalv10008275m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 7.7e-94 348.2 301 53.5
BcaB06g28798 Brassica carinata HOM05D004218 ORTHO05D004938 1.7e-93 347.1 301 54.8
BolC4t27868H Brassica oleracea HOM05D004218 ORTHO05D004938 1.1e-92 344.4 301 54.5
A07p13260 Brassica napus HOM05D004218 ORTHO05D004938 1.5e-92 344.0 297 55.2
SMO118G0107 Selaginella moellendorffii HOM05D004218 ORTHO05D004938 1.5e-92 344.0 286 59.4
BcaB03g14100 Brassica carinata HOM05D004218 ORTHO05D004938 3.3e-92 342.8 292 54.8
BcaB03g11982 Brassica carinata HOM05D004218 ORTHO05D004938 5.6e-92 342.0 319 52.7
FvH4_4g31940 Fragaria vesca HOM05D004218 ORTHO05D004938 5.6e-92 342.0 265 64.9
Thhalv10023603m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 1.0e-90 337.8 300 54.3
Thhalv10007811m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 1.8e-90 337.0 300 52.0
A07p13210 Brassica napus HOM05D004218 ORTHO05D004938 2.3e-90 336.7 300 52.3
AL1G38480 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 6.8e-90 335.1 301 53.8
AL1G38490 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 8.9e-90 334.7 301 52.5
BcaC06g35101 Brassica carinata HOM05D004218 ORTHO05D004938 1.5e-89 334.0 300 52.0
BraA07t29093Z Brassica rapa HOM05D004218 ORTHO05D004938 1.5e-89 334.0 300 52.0
AL1G38500 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 7.5e-89 331.6 301 53.2
AT1G27030 Arabidopsis thaliana HOM05D004218 ORTHO05D004938 7.5e-89 331.6 301 52.8
CARHR024900 Cardamine hirsuta HOM05D004218 ORTHO05D004938 2.2e-88 330.1 301 53.2
AT1G27020 Arabidopsis thaliana HOM05D004218 ORTHO05D004938 8.3e-88 328.2 300 52.7
THA.LOC104822097 Tarenaya hassleriana HOM05D004218 ORTHO05D004938 8.3e-88 328.2 298 52.0
BraA08t34706Z Brassica rapa HOM05D004218 ORTHO05D004938 2.4e-87 326.6 301 51.8
CARHR024890 Cardamine hirsuta HOM05D004218 ORTHO05D004938 3.2e-87 326.2 292 52.1
Thhalv10008276m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 7.0e-87 325.1 299 51.5
BcaC06g35098 Brassica carinata HOM05D004218 ORTHO05D004938 1.6e-86 323.9 273 56.8
BcaB03g14099 Brassica carinata HOM05D004218 ORTHO05D004938 4.6e-86 322.4 306 50.3
Psat0s917g0040 Pisum sativum HOM05D004218 ORTHO05D004938 4.6e-86 322.4 218 67.0
Sp1g21780 Schrenkiella parvula HOM05D004218 ORTHO05D004938 7.8e-86 321.6 300 50.7
Thhalv10000255m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 1.7e-85 320.5 300 52.0
Sp1g21770 Schrenkiella parvula HOM05D004218 ORTHO05D004938 1.7e-85 320.5 298 51.3
A08p27710 Brassica napus HOM05D004218 ORTHO05D004938 3.9e-85 319.3 301 50.5
Sp1g21785 Schrenkiella parvula HOM05D004218 ORTHO05D004938 3.9e-85 319.3 298 52.3
A07p13220 Brassica napus HOM05D004218 ORTHO05D004938 6.6e-85 318.5 305 50.2
C07p19810 Brassica napus HOM05D004218 ORTHO05D004938 1.1e-84 317.8 305 50.2
BolC7t42494H Brassica oleracea HOM05D004218 ORTHO05D004938 1.1e-84 317.8 305 50.2
BraA09t39542Z Brassica rapa HOM05D004218 ORTHO05D004938 1.9e-84 317.0 301 51.8
Carub.0001s2395 Capsella rubella HOM05D004218 ORTHO05D004938 2.5e-84 316.6 299 49.8
A09p40450 Brassica napus HOM05D004218 ORTHO05D004938 3.3e-84 316.2 301 51.5
Carub.0001s2394 Capsella rubella HOM05D004218 ORTHO05D004938 1.4e-82 310.8 299 49.2
BraA07t29094Z Brassica rapa HOM05D004218 ORTHO05D004938 8.3e-80 301.6 305 48.2
BcaC07g39255 Brassica carinata HOM05D004218 ORTHO05D004938 9.2e-79 298.1 299 48.5
AL1G38470 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 3.0e-77 293.1 271 50.2
BcaC05g26350 Brassica carinata HOM05D004218 ORTHO05D004938 8.1e-75 285.0 301 49.2
BolC5t31091H Brassica oleracea HOM05D004218 ORTHO05D004938 5.2e-74 282.3 287 49.5
C05p23720 Brassica napus HOM05D004218 ORTHO05D004938 6.8e-74 282.0 281 50.2
C08p22580 Brassica napus HOM05D004218 ORTHO05D004938 2.3e-69 266.9 349 40.1
Haze_12061 Corylus avellana HOM05D004218 ORTHO05D004938 2.3e-69 266.9 233 60.9
Glyma.01G042500 Glycine max HOM05D004218 ORTHO05D004938 8.4e-64 248.4 283 48.4
BcaC06g35100 Brassica carinata HOM05D004218 ORTHO05D004938 7.8e-62 241.9 244 48.0
AL8G21080 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 2.9e-56 223.4 220 51.8
C07p19800 Brassica napus HOM05D004218 ORTHO05D004938 6.4e-56 222.2 198 53.5
BolC7t42493H Brassica oleracea HOM05D004218 ORTHO05D004938 6.4e-56 222.2 198 53.5
Lj6A794G97 Lonicera japonica HOM05D004218 ORTHO05D004938 1.3e-53 214.5 189 59.8
PRCOL_00000833 Prasinoderma coloniale HOM05D004218 ORTHO05D004938 6.6e-53 212.2 260 43.1
BcaC05g24668 Brassica carinata HOM05D004218 ORTHO05D002942 9.0e-50 201.8 255 43.9
Cre07.g342800 Chlamydomonas reinhardtii HOM05D004218 ORTHO05D004938 8.4e-48 195.3 289 38.8
BolC7t42500H Brassica oleracea HOM05D004218 ORTHO05D004938 7.6e-41 172.2 128 58.6
C07p19850 Brassica napus HOM05D004218 ORTHO05D004938 5.5e-39 166.0 128 57.0
BolC7t42503H Brassica oleracea HOM05D004218 ORTHO05D004938 5.5e-39 166.0 128 57.0
AL8G21090 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 5.1e-37 159.5 296 32.4
BolC8t49896H Brassica oleracea HOM05D004218 ORTHO05D004938 6.7e-37 159.1 148 51.4
C07p19840 Brassica napus HOM05D004218 ORTHO05D004938 2.9e-32 143.7 111 56.8
AUR62026443 Chenopodium quinoa HOM05D004218 ORTHO05D004938 2.5e-31 140.6 85 77.6
C07p19830 Brassica napus HOM05D004218 ORTHO05D004938 1.6e-30 137.9 155 48.4
CAN.G683.6 Capsicum annuum HOM05D004218 ORTHO05D004938 4.5e-25 119.8 94 64.9
MCO10G201 Micromonas commoda HOM05D004218 ORTHO05D004938 7.2e-23 112.5 298 29.2
BcaB06g26783 Brassica carinata HOM05D005295 ORTHO05D005962 5.1e-13 79.7 60 65.0


User provided reference genes

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