Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01320 Erythranthe guttata HOM05D007070 ORTHO05D008892 1.2e-101 373.2 199 100.0
SGA_v2.0_scaffold302G47841 Striga asiatica HOM05D007070 ORTHO05D008892 9.3e-70 267.3 202 75.7
Lj3P1040T26 Lonicera japonica HOM05D007070 ORTHO05D008892 1.2e-69 266.9 202 74.8
SalBow2G0737 Salvia bowleyana HOM05D007070 ORTHO05D008892 1.6e-69 266.5 196 74.0
SalBow2G1571 Salvia bowleyana HOM05D007070 ORTHO05D008892 1.6e-69 266.5 196 74.0
MSTRG.13406 Avicennia marina HOM05D007070 ORTHO05D008892 3.6e-69 265.4 197 74.1
Actinidia31196 Actinidia chinensis HOM05D007070 ORTHO05D008892 1.1e-67 260.4 199 71.9
CSS0037166 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 1.1e-67 260.4 198 72.7
CSS0050316 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 1.1e-67 260.4 198 72.7
Duzib251G0126 Durio zibethinus HOM05D007070 ORTHO05D008892 3.3e-67 258.8 201 70.1
Atru.chr11.1834 Acer truncatum HOM05D007070 ORTHO05D008892 5.7e-67 258.1 195 71.8
PGR119G1526 Punica granatum HOM05D007070 ORTHO05D008892 9.7e-67 257.3 182 74.7
MD13G1074900 Malus domestica HOM05D007070 ORTHO05D008892 3.7e-66 255.4 181 75.7
Manes.05G098800 Manihot esculenta HOM05D007070 ORTHO05D008892 4.8e-66 255.0 156 85.3
Dinv34174 Davidia involucrata HOM05D007070 ORTHO05D008892 8.2e-66 254.2 171 77.8
arahy.Tifrunner.gnm1.ann1.P1GF9J Arachis hypogaea HOM05D007070 ORTHO05D008892 1.1e-65 253.8 187 74.9
Hma1.2p1_0598F.1_g186810 Hydrangea macrophylla HOM05D007070 ORTHO05D008892 1.4e-65 253.4 171 79.5
FAN17G0782 Fragaria x ananassa HOM05D007070 ORTHO05D008892 3.1e-65 252.3 181 74.0
Thecc.02G352500 Theobroma cacao HOM05D007070 ORTHO05D008892 3.1e-65 252.3 168 77.4
Cpa.g.sc183.28 Carica papaya HOM05D007070 ORTHO05D008892 5.3e-65 251.5 189 70.9
FAN07G2888 Fragaria x ananassa HOM05D007070 ORTHO05D008892 5.3e-65 251.5 158 81.0
RcHm_v2.0_Chr4g0440151 Rosa chinensis HOM05D007070 ORTHO05D008892 6.9e-65 251.1 180 73.3
FAN22G1781 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.5e-64 250.0 157 79.6
Haze_12036 Corylus avellana HOM05D007070 ORTHO05D008892 2.0e-64 249.6 172 76.7
Nitab4.5_0012600g0010 Nicotiana tabacum HOM05D007070 ORTHO05D008892 2.6e-64 249.2 201 70.6
Prupe.1G271300 Prunus persica HOM05D007070 ORTHO05D008892 4.5e-64 248.4 175 74.3
arahy.Tifrunner.gnm1.ann1.H49BTR Arachis hypogaea HOM05D007070 ORTHO05D008892 7.7e-64 247.7 187 72.7
Cc11_g13320 Coffea canephora HOM05D007070 ORTHO05D008892 7.7e-64 247.7 197 69.0
Gorai.013G083500 Gossypium raimondii HOM05D007070 ORTHO05D008892 1.7e-63 246.5 201 70.1
Lalb_Chr10g0098121 Lupinus albus HOM05D007070 ORTHO05D008892 2.2e-63 246.1 160 76.2
FvH4_4g31650 Fragaria vesca HOM05D007070 ORTHO05D008892 2.9e-63 245.7 155 79.4
Nitab4.5_0000141g0310 Nicotiana tabacum HOM05D007070 ORTHO05D008892 2.9e-63 245.7 201 69.2
Potri.010G093300 Populus trichocarpa HOM05D007070 ORTHO05D008892 2.9e-63 245.7 201 68.2
FAN12G3127 Fragaria x ananassa HOM05D007070 ORTHO05D008892 3.8e-63 245.4 155 79.4
CiPaw.05G138000 Carya illinoinensis HOM05D007070 ORTHO05D008892 5.0e-63 245.0 177 76.3
TWI75G1629 Tripterygium wilfordii HOM05D007070 ORTHO05D008892 6.5e-63 244.6 155 78.7
Gohir.D13G072700 Gossypium hirsutum HOM05D007070 ORTHO05D008892 8.5e-63 244.2 201 69.2
TAR622G0001 Trochodendron aralioides HOM05D007070 ORTHO05D008892 8.5e-63 244.2 172 75.0
Ah.02g131260 Amaranthus hybridus HOM05D007070 ORTHO05D008892 1.1e-62 243.8 159 77.4
CsaV3_5G032500 Cucumis sativus L. HOM05D007070 ORTHO05D008892 1.1e-62 243.8 156 78.8
Duzib268G0688 Durio zibethinus HOM05D007070 ORTHO05D008892 1.1e-62 243.8 167 76.0
Gohir.A13G072600 Gossypium hirsutum HOM05D007070 ORTHO05D008892 1.1e-62 243.8 201 69.2
MELO3C012078.2 Cucumis melo HOM05D007070 ORTHO05D008892 1.4e-62 243.4 156 78.8
AUR62005745 Chenopodium quinoa HOM05D007070 ORTHO05D008892 4.2e-62 241.9 134 86.6
Rhsim12G0131600 Rhododendron simsii HOM05D007070 ORTHO05D008892 4.2e-62 241.9 166 74.7
RhsimUnG0241900 Rhododendron simsii HOM05D007070 ORTHO05D008892 4.2e-62 241.9 166 74.7
PGSC0003DMG400000874 Solanum tuberosum HOM05D007070 ORTHO05D008892 5.5e-62 241.5 204 67.2
COL.COLO4_22972 Corchorus olitorius HOM05D007070 ORTHO05D008892 1.2e-61 240.4 205 65.4
TAR374G1105 Trochodendron aralioides HOM05D007070 ORTHO05D008892 1.2e-61 240.4 178 70.8
Lsat_1_v5_gn_8_52140 Lactuca sativa HOM05D007070 ORTHO05D008892 2.1e-61 239.6 176 75.0
QL03p064901 Quercus lobata HOM05D007070 ORTHO05D008892 4.6e-61 238.4 158 78.5
Sabra10G0065800 Salix brachista HOM05D007070 ORTHO05D008892 6.1e-61 238.0 175 74.3
Glyma.02G019200 Glycine max HOM05D007070 ORTHO05D008892 7.9e-61 237.7 177 71.8
VMungo1215G0639 Vigna mungo HOM05D007070 ORTHO05D008892 7.9e-61 237.7 163 77.3
DCAR_007140 Daucus carota HOM05D007070 ORTHO05D008892 1.4e-60 236.9 166 75.3
Sed0007814 Sechium edule HOM05D007070 ORTHO05D008892 1.4e-60 236.9 199 65.8
AL1G26230 Arabidopsis lyrata HOM05D007070 ORTHO05D008892 1.8e-60 236.5 165 73.3
Carub.0001s1403 Capsella rubella HOM05D007070 ORTHO05D008892 1.8e-60 236.5 165 73.9
CAN.G375.28 Capsicum annuum HOM05D007070 ORTHO05D008892 3.9e-60 235.3 208 66.3
Phvul.002G088700 Phaseolus vulgaris HOM05D007070 ORTHO05D008892 3.9e-60 235.3 162 75.9
Sopen01g006270 Solanum pennellii HOM05D007070 ORTHO05D008892 6.7e-60 234.6 185 70.3
Thhalv10008846m.g Eutrema salsugineum HOM05D007070 ORTHO05D008892 8.8e-60 234.2 165 71.5
Glyma.01G044500 Glycine max HOM05D007070 ORTHO05D008892 8.8e-60 234.2 176 70.5
Ciclev10032797m.g Citrus clementina HOM05D007070 ORTHO05D008892 1.1e-59 233.8 200 67.0
Eucgr.G02521 Eucalyptus grandis HOM05D007070 ORTHO05D008892 1.1e-59 233.8 177 69.5
Solyc01g010640.3 Solanum lycopersicum HOM05D007070 ORTHO05D008892 1.1e-59 233.8 187 70.1
AT1G14345 Arabidopsis thaliana HOM05D007070 ORTHO05D008892 1.5e-59 233.4 165 72.7
Medtr5g038970 Medicago truncatula HOM05D007070 ORTHO05D008892 1.5e-59 233.4 173 72.8
Sc04g0008310 Simmondsia chinensis HOM05D007070 ORTHO05D008892 2.6e-59 232.6 153 78.4
C05p12140 Brassica napus HOM05D007070 ORTHO05D008892 4.4e-59 231.9 129 85.3
BolC5t29966H Brassica oleracea HOM05D007070 ORTHO05D008892 4.4e-59 231.9 129 85.3
ClCG05G024460 Citrullus lanatus HOM05D007070 ORTHO05D008892 4.4e-59 231.9 125 89.6
Sp1g12710 Schrenkiella parvula HOM05D007070 ORTHO05D008892 4.4e-59 231.9 173 67.6
CARHR014780 Cardamine hirsuta HOM05D007070 ORTHO05D008892 5.7e-59 231.5 203 64.5
BcaB02g06484 Brassica carinata HOM05D007070 ORTHO05D008892 1.7e-58 229.9 162 71.0
CDE05G3062 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 1.7e-58 229.9 172 69.8
Psat2g122360 Pisum sativum HOM05D007070 ORTHO05D008892 4.8e-58 228.4 164 74.4
Aqoxy3G03327 Aquilegia oxysepala HOM05D007070 ORTHO05D008892 6.3e-58 228.0 175 70.9
BraA06t24215Z Brassica rapa HOM05D007070 ORTHO05D008892 6.3e-58 228.0 175 66.9
CANSAT56G2723 Cannabis sativa HOM05D007070 ORTHO05D008892 8.2e-58 227.6 172 69.2
HanXRQChr08g0209191 Helianthus annuus HOM05D007070 ORTHO05D008892 1.8e-57 226.5 175 70.3
ATR0564G356 Amborella trichopoda HOM05D007070 ORTHO05D008892 2.4e-57 226.1 178 66.9
A06p10330 Brassica napus HOM05D007070 ORTHO05D008892 4.1e-57 225.3 199 60.8
Ca_04760_v3 Cicer arietinum L. HOM05D007070 ORTHO05D008892 5.3e-57 224.9 172 71.5
Peaxi162Scf00026g00288 Petunia axillaris HOM05D007070 ORTHO05D008892 5.3e-57 224.9 204 64.7
MBI05_g00391_MAGBIO Magnolia biondii HOM05D007070 ORTHO05D008892 6.9e-57 224.6 169 70.4
MSTRG.684 Avicennia marina HOM05D007070 ORTHO05D008892 1.2e-56 223.8 202 64.9
PSO832G2327 Papaver somniferum HOM05D007070 ORTHO05D008892 3.4e-56 222.2 176 69.3
Lj2g0006172 Lotus japonicus HOM05D007070 ORTHO05D008892 1.7e-55 219.9 128 82.0
PSO591G0158 Papaver somniferum HOM05D007070 ORTHO05D008892 1.7e-55 219.9 176 68.2
ECA236G0127 Erigeron canadensis HOM05D007070 ORTHO05D008892 4.2e-54 215.3 203 60.6
THA.LOC104805942 Tarenaya hassleriana HOM05D007070 ORTHO05D008892 6.1e-53 211.5 121 83.5
TPR.G36542 Trifolium pratense HOM05D007070 ORTHO05D008892 6.1e-53 211.5 116 84.5
Aa31LG1G700 Aethionema arabicum HOM05D007070 ORTHO05D008892 1.5e-51 206.8 162 71.0
CDE05G3277 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 3.3e-51 205.7 120 80.8
HPP92_018585 Vanilla planifolia HOM05D007070 ORTHO05D008892 4.1e-49 198.7 183 56.3
BcaC05g25332 Brassica carinata HOM05D007070 ORTHO05D008892 3.5e-48 195.7 129 76.0
AagrBONN_evm.TU.Sc2ySwM_362.2904 Anthoceros agrestis HOM05D007070 ORTHO05D008892 7.7e-48 194.5 123 73.2
HPP92_018595 Vanilla planifolia HOM05D007070 ORTHO05D008892 7.7e-48 194.5 166 60.2
unitig_699.g19919 Utricularia gibba HOM05D007070 ORTHO05D008892 2.2e-47 193.0 197 55.8
SEGI_28311 Sequoiadendron giganteum HOM05D007070 ORTHO05D008892 1.5e-46 190.3 113 78.8
SMO329G0045 Selaginella moellendorffii HOM05D007070 ORTHO05D008892 2.7e-45 186.0 139 62.6
Zm00001eb402240 Zea mays HOM05D007070 ORTHO05D008892 4.7e-45 185.3 113 77.0
Os03g0170500 Oryza sativa ssp. japonica HOM05D007070 ORTHO05D008892 4.0e-44 182.2 113 77.0
Mapoly0002s0258 Marchantia polymorpha HOM05D007070 ORTHO05D008892 9.7e-43 177.6 116 70.7
AUR62028813 Chenopodium quinoa HOM05D007070 ORTHO05D008892 4.2e-38 162.2 132 63.6
Sc04g0008340 Simmondsia chinensis HOM05D007070 ORTHO05D008892 5.5e-38 161.8 153 58.8
CBR_g47945 Chara braunii HOM05D007070 ORTHO05D008892 4.0e-36 155.6 110 62.7
Cre08.g358540 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 1.9e-22 110.2 153 37.3
MCO16G462 Micromonas commoda HOM05D007070 ORTHO05D008892 1.8e-17 93.6 117 37.6
Atru.chr2.2148 Acer truncatum HOM05D007070 ORTHO05D008892 3.2e-17 92.8 52 80.8
PRCOL_00004582 Prasinoderma coloniale HOM05D007070 ORTHO05D008892 1.2e-16 90.9 106 45.3
Cre07.g321300 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 6.6e-15 85.1 136 33.8


User provided reference genes

Program Settings