Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01306 Erythranthe guttata HOM05D004366 ORTHO05D005058 2.1e-109 399.1 204 100.0
SalBow2G0488 Salvia bowleyana HOM05D004366 ORTHO05D005058 1.3e-87 326.6 202 79.7
Cc11_g13140 Coffea canephora HOM05D004366 ORTHO05D005058 1.4e-84 316.6 202 78.2
Peaxi162Scf00026g03112 Petunia axillaris HOM05D004366 ORTHO05D005058 1.2e-83 313.5 202 78.2
Actinidia31203 Actinidia chinensis HOM05D004366 ORTHO05D005058 4.4e-83 311.6 202 75.2
CSS0003416 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 5.8e-83 311.2 202 76.7
CSS0021388 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 1.7e-82 309.7 202 76.2
Nitab4.5_0000141g0240 Nicotiana tabacum HOM05D004366 ORTHO05D005058 1.7e-82 309.7 201 76.6
Manes.01G186800 Manihot esculenta HOM05D004366 ORTHO05D005058 2.2e-82 309.3 202 76.7
Sc11g0001840 Simmondsia chinensis HOM05D004366 ORTHO05D005058 2.2e-82 309.3 202 75.2
Lj3C1038T15 Lonicera japonica HOM05D004366 ORTHO05D005058 1.1e-81 307.0 202 76.2
SGA_v2.0_scaffold20G09275 Striga asiatica HOM05D004366 ORTHO05D005058 4.1e-81 305.1 201 77.6
Atru.chr11.1817 Acer truncatum HOM05D004366 ORTHO05D005058 4.6e-80 301.6 203 73.9
CAN.G473.145 Capsicum annuum HOM05D004366 ORTHO05D005058 4.6e-80 301.6 202 75.2
TWI12G0004 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 6.0e-80 301.2 202 74.8
Rhsim12G0062000 Rhododendron simsii HOM05D004366 ORTHO05D005058 7.8e-80 300.8 201 74.6
QL03p064520 Quercus lobata HOM05D004366 ORTHO05D005058 1.0e-79 300.4 201 74.6
MD13G1073400 Malus domestica HOM05D004366 ORTHO05D005058 1.3e-79 300.1 202 74.3
Prupe.1G272700 Prunus persica HOM05D004366 ORTHO05D005058 1.3e-79 300.1 202 73.8
Hund05888 Selenicereus undatus HOM05D004366 ORTHO05D005058 3.9e-79 298.5 198 75.3
Aqoxy3G03355 Aquilegia oxysepala HOM05D004366 ORTHO05D005058 8.6e-79 297.4 194 74.7
Cpa.g.sc128.8 Carica papaya HOM05D004366 ORTHO05D005058 8.6e-79 297.4 200 74.5
ClCG05G024360 Citrullus lanatus HOM05D004366 ORTHO05D005058 1.1e-78 297.0 202 71.8
Eucgr.B03429 Eucalyptus grandis HOM05D004366 ORTHO05D005058 1.9e-78 296.2 202 72.8
Oeu028302.2 Olea europaea HOM05D004366 ORTHO05D005058 1.9e-78 296.2 204 74.0
FvH4_4g31510 Fragaria vesca HOM05D004366 ORTHO05D005058 2.5e-78 295.8 200 74.5
FAN12G0862 Fragaria x ananassa HOM05D004366 ORTHO05D005058 5.6e-78 294.7 200 74.0
Sopen01g006640 Solanum pennellii HOM05D004366 ORTHO05D005058 5.6e-78 294.7 202 73.3
Glyma.01G045700 Glycine max HOM05D004366 ORTHO05D005058 1.2e-77 293.5 198 72.2
Medtr5g039690 Medicago truncatula HOM05D004366 ORTHO05D005058 2.1e-77 292.7 201 71.6
Solyc01g010810.4 Solanum lycopersicum HOM05D004366 ORTHO05D005058 2.1e-77 292.7 202 72.8
CiPaw.06G083500 Carya illinoinensis HOM05D004366 ORTHO05D005058 3.6e-77 292.0 201 71.6
Glyma.02G106000 Glycine max HOM05D004366 ORTHO05D005058 3.6e-77 292.0 198 72.2
CSS0022805 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 4.7e-77 291.6 199 72.9
Ciclev10032771m.g Citrus clementina HOM05D004366 ORTHO05D005058 4.7e-77 291.6 202 71.8
MELO3C012087.2 Cucumis melo HOM05D004366 ORTHO05D005058 4.7e-77 291.6 202 72.3
Thhalv10019150m.g Eutrema salsugineum HOM05D004366 ORTHO05D005058 1.1e-76 290.4 202 70.3
MD16G1074700 Malus domestica HOM05D004366 ORTHO05D005058 1.4e-76 290.0 202 73.3
Medtr8g463620 Medicago truncatula HOM05D004366 ORTHO05D005058 1.4e-76 290.0 201 70.6
Psat0s2341g0040 Pisum sativum HOM05D004366 ORTHO05D005058 1.8e-76 289.7 198 72.7
Sp5g24810 Schrenkiella parvula HOM05D004366 ORTHO05D005058 2.4e-76 289.3 202 70.8
Lalb_Chr04g0256161 Lupinus albus HOM05D004366 ORTHO05D005058 3.1e-76 288.9 198 72.2
Ca_04775_v3 Cicer arietinum L. HOM05D004366 ORTHO05D005058 4.0e-76 288.5 198 71.7
RcHm_v2.0_Chr4g0440001 Rosa chinensis HOM05D004366 ORTHO05D005058 4.0e-76 288.5 200 73.0
EL10Ac6g13190 Beta vulgaris HOM05D004366 ORTHO05D005058 5.2e-76 288.1 200 69.0
Lj2g0005379 Lotus japonicus HOM05D004366 ORTHO05D005058 5.2e-76 288.1 199 72.9
PGSC0003DMG400006558 Solanum tuberosum HOM05D004366 ORTHO05D005058 5.2e-76 288.1 202 72.3
AL2G28850 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 6.8e-76 287.7 202 70.3
C06p36720 Brassica napus HOM05D004366 ORTHO05D005058 8.9e-76 287.3 199 70.9
CsaV3_5G032600 Cucumis sativus L. HOM05D004366 ORTHO05D005058 8.9e-76 287.3 202 71.8
Thecc.02G350500 Theobroma cacao HOM05D004366 ORTHO05D005058 8.9e-76 287.3 198 72.2
A07p31430 Brassica napus HOM05D004366 ORTHO05D005058 1.2e-75 287.0 199 70.4
BraA07t30778Z Brassica rapa HOM05D004366 ORTHO05D005058 1.2e-75 287.0 199 70.4
Sed0027317 Sechium edule HOM05D004366 ORTHO05D005058 1.2e-75 287.0 202 71.3
BolC6t38782H Brassica oleracea HOM05D004366 ORTHO05D005058 1.5e-75 286.6 199 70.9
FAN17G2550 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.5e-75 286.6 200 72.0
Gohir.D13G074000 Gossypium hirsutum HOM05D004366 ORTHO05D005058 3.4e-75 285.4 201 69.7
THA.LOC104822115 Tarenaya hassleriana HOM05D004366 ORTHO05D005058 3.4e-75 285.4 204 69.1
AUR62026617 Chenopodium quinoa HOM05D004366 ORTHO05D005058 4.4e-75 285.0 200 70.0
MBI02_g23682_MAGBIO Magnolia biondii HOM05D004366 ORTHO05D005058 4.4e-75 285.0 202 69.8
PSO339G1196 Papaver somniferum HOM05D004366 ORTHO05D005058 4.4e-75 285.0 200 71.5
Gorai.013G084600 Gossypium raimondii HOM05D004366 ORTHO05D005058 5.8e-75 284.6 201 69.7
Carub.0002s1634 Capsella rubella HOM05D004366 ORTHO05D005058 9.9e-75 283.9 202 69.3
BcaC08g46415 Brassica carinata HOM05D004366 ORTHO05D005058 1.3e-74 283.5 202 67.3
BolC6t39421H Brassica oleracea HOM05D004366 ORTHO05D005058 1.3e-74 283.5 202 67.3
Gohir.A13G073900 Gossypium hirsutum HOM05D004366 ORTHO05D005058 1.7e-74 283.1 201 69.2
PSO384G0235 Papaver somniferum HOM05D004366 ORTHO05D005058 1.7e-74 283.1 200 71.5
AT1G69680 Arabidopsis thaliana HOM05D004366 ORTHO05D005058 2.2e-74 282.7 202 68.3
Aa31LG4G11100 Aethionema arabicum HOM05D004366 ORTHO05D005058 3.8e-74 282.0 198 68.7
BcaB03g14744 Brassica carinata HOM05D004366 ORTHO05D005058 3.8e-74 282.0 202 66.8
A07p36060 Brassica napus HOM05D004366 ORTHO05D005058 4.9e-74 281.6 202 67.8
C06p43460 Brassica napus HOM05D004366 ORTHO05D005058 4.9e-74 281.6 202 66.8
BraA07t31186Z Brassica rapa HOM05D004366 ORTHO05D005058 4.9e-74 281.6 202 67.8
CARHR062670 Cardamine hirsuta HOM05D004366 ORTHO05D005058 4.9e-74 281.6 202 67.8
Phvul.002G086500 Phaseolus vulgaris HOM05D004366 ORTHO05D005058 6.4e-74 281.2 198 70.2
arahy.Tifrunner.gnm1.ann1.5V6A51 Arachis hypogaea HOM05D004366 ORTHO05D005058 8.4e-74 280.8 212 67.5
HanXRQChr08g0210471 Helianthus annuus HOM05D004366 ORTHO05D005058 1.9e-73 279.6 194 72.2
unitig_22.g6909 Utricularia gibba HOM05D004366 ORTHO05D005058 2.4e-73 279.3 201 71.6
Lsat_1_v5_gn_8_52741 Lactuca sativa HOM05D004366 ORTHO05D005058 3.2e-73 278.9 194 71.6
Nitab4.5_0005950g0010 Nicotiana tabacum HOM05D004366 ORTHO05D005058 3.2e-73 278.9 201 71.1
Sp3g28750 Schrenkiella parvula HOM05D004366 ORTHO05D005058 3.2e-73 278.9 205 66.8
FAN24G0452 Fragaria x ananassa HOM05D004366 ORTHO05D005058 4.2e-73 278.5 200 70.0
Nn4g23131 Nelumbo nucifera HOM05D004366 ORTHO05D005058 4.2e-73 278.5 200 70.5
FAN15G0746 Fragaria x ananassa HOM05D004366 ORTHO05D005058 9.3e-73 277.3 200 70.5
TWI53G1314 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 1.6e-72 276.6 202 69.3
COL.COLO4_22987 Corchorus olitorius HOM05D004366 ORTHO05D005058 1.0e-71 273.9 198 69.7
HanXRQChr12g0362541 Helianthus annuus HOM05D004366 ORTHO05D005058 1.3e-71 273.5 194 70.1
ATR0564G205 Amborella trichopoda HOM05D004366 ORTHO05D005058 1.7e-71 273.1 198 70.2
FAN27G2895 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.7e-71 273.1 201 70.1
BcaB03g15490 Brassica carinata HOM05D004366 ORTHO05D005058 3.0e-71 272.3 200 67.5
PSO675G4203 Papaver somniferum HOM05D004366 ORTHO05D005058 3.0e-71 272.3 200 68.5
FvH4_2g13310 Fragaria vesca HOM05D004366 ORTHO05D005058 8.7e-71 270.8 201 69.2
Sabra13G0046200 Salix brachista HOM05D004366 ORTHO05D005058 1.5e-70 270.0 200 67.0
Os04g0459600 Oryza sativa ssp. japonica HOM05D004366 ORTHO05D005058 1.9e-70 269.6 202 65.8
Haze_12025 Corylus avellana HOM05D004366 ORTHO05D005058 2.5e-70 269.2 201 69.7
Oeu013622.3 Olea europaea HOM05D004366 ORTHO05D005058 3.3e-70 268.9 201 69.2
AUR62005764 Chenopodium quinoa HOM05D004366 ORTHO05D005058 6.2e-69 264.6 182 71.4
ECA233G4070 Erigeron canadensis HOM05D004366 ORTHO05D005058 8.1e-69 264.2 194 67.5
Zm00001eb080830 Zea mays HOM05D004366 ORTHO05D005058 4.0e-68 261.9 198 64.6
AUR62034912 Chenopodium quinoa HOM05D004366 ORTHO05D005058 6.9e-68 261.2 181 69.6
CANSAT25G1390 Cannabis sativa HOM05D004366 ORTHO05D005058 2.0e-67 259.6 200 66.0
CANSAT54G1616 Cannabis sativa HOM05D004366 ORTHO05D005058 2.6e-67 259.2 200 66.0
BcaC08g45875 Brassica carinata HOM05D004366 ORTHO05D005058 4.4e-67 258.5 202 65.8
AUR62028793 Chenopodium quinoa HOM05D004366 ORTHO05D005058 5.8e-67 258.1 200 64.5
PGR102G1003 Punica granatum HOM05D004366 ORTHO05D005058 7.6e-67 257.7 198 64.6
Hma1.2p1_0598F.1_g186660 Hydrangea macrophylla HOM05D004366 ORTHO05D005058 2.2e-66 256.1 332 47.0
arahy.Tifrunner.gnm1.ann1.QXP3RB Arachis hypogaea HOM05D004366 ORTHO05D005058 4.9e-66 255.0 177 70.6
AL7G43580 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 4.2e-65 251.9 182 69.2
Aa31sc15G10 Aethionema arabicum HOM05D004366 ORTHO05D005058 5.4e-65 251.5 179 71.5
SEGI_03925 Sequoiadendron giganteum HOM05D004366 ORTHO05D005058 9.3e-65 250.8 200 59.5
Potri.013G049900 Populus trichocarpa HOM05D004366 ORTHO05D005058 7.9e-64 247.7 185 68.1
VMungo1215G0984 Vigna mungo HOM05D004366 ORTHO05D005058 1.0e-63 247.3 175 71.4
HPP92_006020 Vanilla planifolia HOM05D004366 ORTHO05D005058 1.5e-62 243.4 182 64.3
Ah.03g135200 Amaranthus hybridus HOM05D004366 ORTHO05D005058 3.3e-62 242.3 198 62.6
SGA_v2.0_scaffold53G19387 Striga asiatica HOM05D004366 ORTHO05D005058 5.6e-62 241.5 238 58.4
GSVIVG01020010001 Vitis vinifera HOM05D004366 ORTHO05D005058 3.6e-61 238.8 168 73.8
vmacro01244 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 2.6e-59 232.6 257 51.4
Duzib248G1524 Durio zibethinus HOM05D004366 ORTHO05D005058 1.7e-58 229.9 199 60.8
Aa31LG9G5650 Aethionema arabicum HOM05D004366 ORTHO05D005058 2.9e-58 229.2 217 57.1
FAN22G2022 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.1e-54 217.2 235 54.0
TPR.G39101 Trifolium pratense HOM05D004366 ORTHO05D005058 7.4e-54 214.5 167 66.5
Pp3c9_14930 Physcomitrium patens HOM05D004366 ORTHO05D005058 9.0e-52 207.6 202 53.0
Cfa008996 Carpinus fangiana HOM05D004366 ORTHO05D005058 2.6e-51 206.1 220 52.7
AagrBONN_evm.TU.Sc2ySwM_344.5131 Anthoceros agrestis HOM05D004366 ORTHO05D005058 5.5e-49 198.4 193 53.4
DCAR_027406 Daucus carota HOM05D002775 ORTHO05D005058 4.6e-48 195.3 128 77.3
Dinv16634 Davidia involucrata HOM05D004366 ORTHO05D005058 8.7e-47 191.0 112 81.2
vmacro01242 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 5.7e-46 188.3 230 48.7
SMO147G0050 Selaginella moellendorffii HOM05D004366 ORTHO05D005058 1.0e-42 177.6 190 48.9
TAR629G2773 Trochodendron aralioides HOM05D004366 ORTHO05D005058 1.7e-42 176.8 112 75.9
SalBow2G3183 Salvia bowleyana HOM05D004366 ORTHO05D005058 1.1e-41 174.1 116 76.7
CBR_g17957 Chara braunii HOM05D004366 ORTHO05D005058 1.9e-41 173.3 199 46.7
arahy.Tifrunner.gnm1.ann1.4LW61L Arachis hypogaea HOM05D004366 ORTHO05D005058 4.2e-41 172.2 119 69.7
AagrBONN_evm.TU.Sc2ySwM_362.1786 Anthoceros agrestis HOM05D004366 ORTHO05D005058 2.8e-37 159.5 173 50.9
Pp3c15_14240 Physcomitrium patens HOM05D004366 ORTHO05D005058 2.0e-35 153.3 160 51.9
MSTRG.695 Avicennia marina HOM05D004366 ORTHO05D005058 2.6e-35 152.9 85 85.9
MD11G1061500 Malus domestica HOM05D004366 ORTHO05D005058 1.9e-33 146.7 112 64.3
Potri.019G023800 Populus trichocarpa HOM05D004366 ORTHO05D005058 3.9e-31 139.0 89 71.9
Mapoly0113s0045 Marchantia polymorpha HOM05D004366 ORTHO05D005058 2.6e-30 136.3 208 39.9
CSS0000370 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 1.4e-28 130.6 83 75.9
CSS0042124 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 3.1e-28 129.4 85 74.1
arahy.Tifrunner.gnm1.ann1.MY0RSE Arachis hypogaea HOM05D004366 ORTHO05D005058 2.2e-26 123.2 103 61.2
arahy.Tifrunner.gnm1.ann1.J913Y5 Arachis hypogaea HOM05D004366 ORTHO05D005058 6.5e-26 121.7 84 67.9
MCO13G325 Micromonas commoda HOM05D004366 ORTHO05D005058 1.6e-24 117.1 205 38.0
Lj6A789T49 Lonicera japonica HOM05D004366 ORTHO05D005058 2.1e-24 116.7 89 64.0
arahy.Tifrunner.gnm1.ann1.D4KK35 Arachis hypogaea HOM05D004366 ORTHO05D005058 7.9e-24 114.8 120 51.7
CAN.G154.11 Capsicum annuum HOM05D004366 ORTHO05D005058 6.3e-21 105.1 130 46.2
PGSC0003DMG400015729 Solanum tuberosum HOM05D004366 ORTHO05D005058 1.2e-19 100.9 102 54.9
FAN07G2952 Fragaria x ananassa HOM05D004366 ORTHO05D005058 3.8e-18 95.9 72 66.7
Rhsim11G0057700 Rhododendron simsii HOM05D004366 ORTHO05D005058 5.0e-18 95.5 78 65.4
BcaC07g37109 Brassica carinata HOM05D004366 ORTHO05D005058 6.5e-18 95.1 76 60.5
arahy.Tifrunner.gnm1.ann1.8CQ436 Arachis hypogaea HOM05D004366 ORTHO05D005058 8.5e-18 94.7 68 69.1
arahy.Tifrunner.gnm1.ann1.N9R1JE Arachis hypogaea HOM05D004366 ORTHO05D005058 1.9e-17 93.6 77 61.0
C08p04780 Brassica napus HOM05D004366 ORTHO05D005058 3.2e-17 92.8 70 62.9
BolC8t47277H Brassica oleracea HOM05D004366 ORTHO05D005058 6.1e-16 88.6 75 60.0
Lsat_1_v5_gn_1_103541 Lactuca sativa HOM05D004366 ORTHO05D005058 2.3e-15 86.7 103 48.5
Cre05.g244850 Chlamydomonas reinhardtii HOM05D004366 ORTHO05D005058 2.0e-14 83.6 193 32.6
PRCOL_00002884 Prasinoderma coloniale HOM05D004366 ORTHO05D005058 5.7e-14 82.0 194 30.4
arahy.Tifrunner.gnm1.ann1.NKT7G2 Arachis hypogaea HOM05D004366 ORTHO05D005058 1.8e-12 77.0 112 43.8
SalBow1G5797 Salvia bowleyana HOM05D004366 ORTHO05D005058 1.6e-11 73.9 43 79.1
CANSAT54G0841 Cannabis sativa HOM05D001400 ORTHO05D001795 1.0e-10 71.2 49 63.3
AUR62028525 Chenopodium quinoa HOM05D004366 ORTHO05D000022 5.0e-10 68.9 47 70.2
PSO339G3282 Papaver somniferum HOM05D000073 ORTHO05D000033 2.5e-09 66.6 49 63.3
A08p04480 Brassica napus HOM05D004366 ORTHO05D005058 2.0e-06 57.0 70 41.4
Atru.chr9.1643 Acer truncatum HOM05D004366 ORTHO05D005058 2.6e-06 56.6 42 61.9


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