Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 3.4e-107 391.7 203 100.0
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 2.6e-59 232.6 203 65.5
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 4.2e-57 225.3 203 60.6
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 8.7e-55 217.6 204 63.7
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 7.1e-49 198.0 203 56.7
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 1.9e-46 189.9 177 60.5
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 5.6e-46 188.3 176 56.8
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 5.6e-46 188.3 169 62.1
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 7.3e-46 188.0 186 54.3
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 9.6e-46 187.6 121 75.2
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 3.6e-45 185.7 125 71.2
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 6.2e-45 184.9 204 55.4
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 6.2e-45 184.9 124 71.0
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 8.1e-45 184.5 134 69.4
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 8.1e-45 184.5 185 55.1
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 1.4e-44 183.7 142 65.5
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 1.8e-44 183.3 124 74.2
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 2.4e-44 183.0 125 69.6
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 2.4e-44 183.0 123 74.0
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 2.4e-44 183.0 178 55.1
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 3.1e-44 182.6 195 54.9
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 4.0e-44 182.2 124 69.4
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 5.3e-44 181.8 189 55.6
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 6.9e-44 181.4 240 49.2
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 6.9e-44 181.4 185 53.0
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 9.0e-44 181.0 125 68.8
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.2e-43 180.6 121 71.9
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.2e-43 180.6 121 71.9
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 1.5e-43 180.3 122 69.7
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 2.0e-43 179.9 122 70.5
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 2.0e-43 179.9 152 62.5
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 2.0e-43 179.9 169 55.6
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 5.8e-43 178.3 129 70.5
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 5.8e-43 178.3 122 70.5
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 9.9e-43 177.6 124 66.9
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 9.9e-43 177.6 145 64.1
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.3e-42 177.2 124 66.1
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.3e-42 177.2 124 66.1
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 1.3e-42 177.2 139 64.7
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.7e-42 176.8 124 66.1
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 1.7e-42 176.8 174 55.7
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 1.7e-42 176.8 170 54.7
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 2.2e-42 176.4 196 53.1
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 4.9e-42 175.3 125 66.4
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 6.4e-42 174.9 186 52.2
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 8.4e-42 174.5 164 55.5
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 1.1e-41 174.1 137 65.7
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 1.4e-41 173.7 148 58.8
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 1.9e-41 173.3 124 67.7
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 2.4e-41 172.9 154 60.4
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 3.2e-41 172.6 166 56.6
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 3.2e-41 172.6 125 65.6
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 5.5e-41 171.8 139 61.9
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 5.5e-41 171.8 124 70.2
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 5.5e-41 171.8 147 61.9
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 9.3e-41 171.0 126 66.7
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 9.3e-41 171.0 129 64.3
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 1.2e-40 170.6 124 67.7
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 1.2e-40 170.6 175 52.6
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 1.6e-40 170.2 124 66.9
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 1.6e-40 170.2 137 62.8
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 3.5e-40 169.1 140 59.3
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 3.5e-40 169.1 121 69.4
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 3.5e-40 169.1 137 62.0
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 3.5e-40 169.1 151 59.6
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 7.9e-40 167.9 144 60.4
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 7.9e-40 167.9 121 66.9
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 1.0e-39 167.5 204 47.1
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 1.0e-39 167.5 117 69.2
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 1.3e-39 167.2 205 47.8
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 1.8e-39 166.8 155 58.7
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 3.9e-39 165.6 144 59.0
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 5.1e-39 165.2 162 51.2
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 1.1e-38 164.1 144 59.0
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 1.1e-38 164.1 125 61.6
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 5.6e-38 161.8 142 58.5
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 7.4e-38 161.4 142 57.0
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 7.4e-38 161.4 150 57.3
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 9.6e-38 161.0 121 66.1
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 1.3e-37 160.6 120 63.3
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 1.3e-37 160.6 121 66.1
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 1.3e-37 160.6 121 66.1
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 1.3e-37 160.6 121 66.1
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 1.3e-37 160.6 121 66.1
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 1.3e-37 160.6 121 66.1
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 2.8e-37 159.5 121 63.6
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 2.8e-37 159.5 183 48.6
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 3.7e-37 159.1 148 55.4
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 4.8e-37 158.7 121 63.6
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 6.2e-37 158.3 126 63.5
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 1.4e-36 157.1 174 51.7
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 3.1e-36 156.0 142 57.0
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 4.0e-36 155.6 144 56.9
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 2.0e-35 153.3 118 60.2
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 3.8e-34 149.1 120 56.7
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 8.4e-34 147.9 154 50.6
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 4.2e-33 145.6 100 67.0
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 2.3e-31 139.8 116 56.9
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 1.9e-30 136.7 119 57.1
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 1.7e-26 123.6 109 53.2
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 2.7e-24 116.3 113 55.8
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 2.7e-24 116.3 113 55.8
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 2.7e-24 116.3 113 55.8
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 2.5e-22 109.8 170 40.6
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 3.7e-21 105.9 128 47.7
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 3.1e-20 102.8 114 52.6
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 9.0e-20 101.3 129 45.0
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 2.6e-19 99.8 107 49.5
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 1.3e-18 97.4 80 57.5
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 3.8e-18 95.9 104 51.9
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 3.6e-16 89.4 70 67.1
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 1.1e-14 84.3 114 37.7
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 5.3e-12 75.5 50 60.0
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 1.8e-07 60.5 141 34.0


User provided reference genes

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