Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01173 Erythranthe guttata HOM05D004942 ORTHO05D005687 0.0e+00 1983.8 992 100.0
SGA_v2.0_scaffold16G07813 Striga asiatica HOM05D004942 ORTHO05D005687 2.3e-278 962.6 1090 51.6
Migut.A01205 Erythranthe guttata HOM05D004942 ORTHO05D005687 2.0e-274 949.5 1012 57.2
SalBow2G1731 Salvia bowleyana HOM05D004942 ORTHO05D005687 1.5e-269 933.3 1133 49.8
Migut.A01186 Erythranthe guttata HOM05D004942 ORTHO05D005687 1.6e-266 923.3 1021 55.4
Oeu020362.1 Olea europaea HOM05D004942 ORTHO05D005687 3.3e-256 889.0 1137 47.5
Cc11_g11760 Coffea canephora HOM05D004942 ORTHO05D005687 1.1e-184 651.4 1173 38.2
Peaxi162Scf00175g00531 Petunia axillaris HOM05D004942 ORTHO05D005687 5.9e-181 639.0 1146 38.3
QL03p073561 Quercus lobata HOM05D004942 ORTHO05D005687 3.4e-168 596.7 1293 34.3
GSVIVG01012245001 Vitis vinifera HOM05D004942 ORTHO05D005687 1.7e-167 594.3 1182 37.4
Cfa008858 Carpinus fangiana HOM05D004942 ORTHO05D005687 4.8e-167 592.8 1304 34.6
Rhsim09G0125700 Rhododendron simsii HOM05D004942 ORTHO05D005687 1.5e-163 581.3 1359 34.0
Haze_11879 Corylus avellana HOM05D004942 ORTHO05D005687 1.9e-163 580.9 1306 33.7
Nitab4.5_0000027g0020 Nicotiana tabacum HOM05D004942 ORTHO05D005687 7.2e-163 578.9 1188 34.4
HanXRQChr17g0568411 Helianthus annuus HOM05D004942 ORTHO05D005687 2.7e-162 577.0 1022 37.8
Manes.01G026200 Manihot esculenta HOM05D004942 ORTHO05D005687 2.7e-162 577.0 1251 34.9
Nitab4.5_0003545g0010 Nicotiana tabacum HOM05D004942 ORTHO05D005687 1.6e-157 561.2 1210 33.5
CiPaw.06G093500 Carya illinoinensis HOM05D004942 ORTHO05D005687 1.5e-155 554.7 1255 34.0
unitig_26.g10284 Utricularia gibba HOM05D004942 ORTHO05D005687 1.5e-155 554.7 1044 37.4
Thecc.02G326800 Theobroma cacao HOM05D004942 ORTHO05D005687 5.6e-155 552.7 1300 33.6
Prupe.1G290000 Prunus persica HOM05D004942 ORTHO05D005687 4.0e-153 546.6 1263 33.7
ECA234G0983 Erigeron canadensis HOM05D004942 ORTHO05D005687 1.3e-151 541.6 1145 35.1
Sopen05g006850 Solanum pennellii HOM05D004942 ORTHO05D005687 4.1e-150 536.6 1524 30.1
Gorai.008G175800 Gossypium raimondii HOM05D004942 ORTHO05D005687 1.2e-149 535.0 1273 34.2
Potri.008G097700 Populus trichocarpa HOM05D004942 ORTHO05D005687 7.8e-149 532.3 1297 31.6
Solyc05g012060.4 Solanum lycopersicum HOM05D004942 ORTHO05D005687 1.3e-148 531.6 1525 29.9
MD16G1059100 Malus domestica HOM05D004942 ORTHO05D005687 1.5e-147 528.1 1390 31.7
Duzib251G0048 Durio zibethinus HOM05D004942 ORTHO05D005687 2.5e-147 527.3 1295 32.5
CANSAT64G2200 Cannabis sativa HOM05D004942 ORTHO05D005687 6.2e-146 522.7 1223 33.0
RcHm_v2.0_Chr4g0437911 Rosa chinensis HOM05D004942 ORTHO05D005687 1.4e-145 521.5 1295 31.8
VMungo0251G2230 Vigna mungo HOM05D004942 ORTHO05D005687 1.8e-145 521.2 1145 33.4
Hma1.2p1_2519F.1_g323790 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 2.0e-144 517.7 1182 34.3
Phvul.003G282800 Phaseolus vulgaris HOM05D004942 ORTHO05D005687 3.9e-140 503.4 1225 32.2
Sc04g0007460 Simmondsia chinensis HOM05D004942 ORTHO05D005687 5.0e-140 503.1 1309 31.9
Hund25161 Selenicereus undatus HOM05D004942 ORTHO05D005687 1.6e-138 498.0 1226 31.2
FAN22G2425 Fragaria x ananassa HOM05D004942 ORTHO05D005687 4.0e-137 493.4 1273 30.8
THA.LOC104822000 Tarenaya hassleriana HOM05D004942 ORTHO05D005687 3.4e-136 490.3 1204 32.4
TWI79G0892 Tripterygium wilfordii HOM05D004942 ORTHO05D005687 3.7e-135 486.9 1221 32.8
CAN.G707.24 Capsicum annuum HOM05D004942 ORTHO05D005687 7.1e-134 482.6 1434 29.1
Cpa.g.sc1669.1 Carica papaya HOM05D004942 ORTHO05D005687 1.5e-131 474.9 1173 33.2
Lalb_Chr09g0334721 Lupinus albus HOM05D004942 ORTHO05D005687 1.9e-131 474.6 1278 31.2
FvH4_4g29660 Fragaria vesca HOM05D004942 ORTHO05D005687 4.3e-131 473.4 1274 30.7
Glyma.16G091700 Glycine max HOM05D004942 ORTHO05D005687 9.5e-131 472.2 1190 31.8
Ah.03g138750 Amaranthus hybridus HOM05D004942 ORTHO05D005687 2.1e-130 471.1 1260 32.1
FAN07G2875 Fragaria x ananassa HOM05D004942 ORTHO05D005687 6.2e-130 469.5 1313 29.9
Aqoxy3G00534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 1.8e-129 468.0 1291 30.6
Ciclev10033741m.g Citrus clementina HOM05D004942 ORTHO05D005687 5.2e-129 466.5 1211 31.8
EL10Ac6g15023 Beta vulgaris HOM05D004942 ORTHO05D005687 1.2e-128 465.3 1258 32.5
COL.COLO4_27850 Corchorus olitorius HOM05D004942 ORTHO05D005687 6.4e-127 459.5 1087 33.4
Lj4g0014066 Lotus japonicus HOM05D004942 ORTHO05D005687 6.4e-127 459.5 1212 31.4
Lj3A1029T37 Lonicera japonica HOM05D004942 ORTHO05D005687 1.1e-126 458.8 1299 31.9
Aqoxy4G01534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 3.2e-126 457.2 1311 30.2
AL1G39420 Arabidopsis lyrata HOM05D004942 ORTHO05D005687 4.1e-126 456.8 1235 32.0
FAN12G1725 Fragaria x ananassa HOM05D004942 ORTHO05D005687 2.1e-125 454.5 1309 29.8
AT1G26330 Arabidopsis thaliana HOM05D004942 ORTHO05D005687 2.7e-125 454.1 1217 31.5
Thhalv10006590m.g Eutrema salsugineum HOM05D004942 ORTHO05D005687 6.6e-124 449.5 1228 31.0
Nn3g17507 Nelumbo nucifera HOM05D004942 ORTHO05D005687 6.6e-124 449.5 1426 28.7
AUR62007894 Chenopodium quinoa HOM05D004942 ORTHO05D005687 1.1e-123 448.7 1386 29.7
Psat4g122040 Pisum sativum HOM05D004942 ORTHO05D005687 4.3e-123 446.8 1130 32.8
Sed0022979 Sechium edule HOM05D004942 ORTHO05D005687 8.1e-122 442.6 1297 29.2
Sabra08G0073900 Salix brachista HOM05D004942 ORTHO05D005687 1.8e-121 441.4 1327 28.7
Medtr8g066290 Medicago truncatula HOM05D004942 ORTHO05D005687 2.4e-121 441.0 1235 30.1
CARHR025590 Cardamine hirsuta HOM05D004942 ORTHO05D005687 3.1e-121 440.7 1218 31.0
MELO3C012244.2 Cucumis melo HOM05D004942 ORTHO05D005687 4.4e-120 436.8 1266 29.6
Hma1.2p1_0566F.1_g179990 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 1.7e-119 434.9 1148 32.1
Carub.0001s2467 Capsella rubella HOM05D004942 ORTHO05D005687 2.2e-119 434.5 1200 31.0
PSO478G0521 Papaver somniferum HOM05D004942 ORTHO05D005687 3.8e-119 433.7 1354 29.9
Lsat_1_v5_gn_4_11720 Lactuca sativa HOM05D004942 ORTHO05D005687 4.9e-119 433.3 1051 33.3
PSO017G2640 Papaver somniferum HOM05D004942 ORTHO05D005687 6.0e-117 426.4 1354 29.8
AUR62003077 Chenopodium quinoa HOM05D004942 ORTHO05D005687 7.3e-115 419.5 1482 27.5
BcaC05g26635 Brassica carinata HOM05D004942 ORTHO05D005687 2.4e-113 414.5 1312 29.0
ClCG05G022730 Citrullus lanatus HOM05D004942 ORTHO05D005687 4.4e-112 410.2 1288 29.0
Sp1g22360 Schrenkiella parvula HOM05D004942 ORTHO05D005687 4.9e-111 406.8 1244 29.4
PGR031G3471 Punica granatum HOM05D004942 ORTHO05D005687 8.4e-111 406.0 1256 29.7
BcaC05g26421 Brassica carinata HOM05D004942 ORTHO05D005687 9.3e-110 402.5 1293 28.2
A09p39800 Brassica napus HOM05D004942 ORTHO05D005687 9.3e-110 402.5 1312 28.3
MBI16_g37883_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 1.0e-108 399.1 1601 27.1
C05p24600 Brassica napus HOM05D004942 ORTHO05D005687 3.0e-108 397.5 1294 27.9
BolC5t31196H Brassica oleracea HOM05D004942 ORTHO05D005687 3.0e-108 397.5 1294 27.9
TPR.G3371 Trifolium pratense HOM05D004942 ORTHO05D005687 4.3e-107 393.7 1141 30.3
Ca_22664_v3 Cicer arietinum L. HOM05D004942 ORTHO05D005687 1.3e-106 392.1 920 32.9
Psat1g014920 Pisum sativum HOM05D004942 ORTHO05D005687 2.8e-106 391.0 1083 30.7
BraA09t39480Z Brassica rapa HOM05D004942 ORTHO05D005687 1.1e-105 389.0 1324 27.9
vmacro10440 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 2.4e-105 387.9 476 45.6
Gohir.A12G159900 Gossypium hirsutum HOM05D004942 ORTHO05D005687 3.8e-95 354.0 471 44.2
ATR0827G101 Amborella trichopoda HOM05D004942 ORTHO05D005687 6.7e-92 343.2 1529 25.1
Os09g0101800 Oryza sativa ssp. japonica HOM05D004942 ORTHO05D005687 8.7e-92 342.8 1103 29.4
Gohir.D12G163200 Gossypium hirsutum HOM05D004942 ORTHO05D005687 6.3e-90 336.7 895 31.2
DCAR_023750 Daucus carota HOM05D004942 ORTHO05D005687 1.1e-89 335.9 1255 26.9
MBI16_g47660_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 4.2e-86 323.9 338 50.3
HPP92_000888 Vanilla planifolia HOM05D004942 ORTHO05D005687 5.5e-86 323.6 1343 25.8
Aa31LG7G8720 Aethionema arabicum HOM05D004942 ORTHO05D005687 3.9e-84 317.4 1175 26.5
Zm00001eb095700 Zea mays HOM05D004942 ORTHO05D005687 9.0e-81 306.2 1176 25.9
TAR629G1003 Trochodendron aralioides HOM05D004942 ORTHO05D005687 1.1e-75 289.3 281 52.0
CsaV3_5G034290 Cucumis sativus L. HOM05D004942 ORTHO05D005687 2.2e-74 285.0 1012 27.9
Actinidia28654 Actinidia chinensis HOM05D004942 ORTHO05D005687 1.8e-73 282.0 716 31.6
Dinv34045 Davidia involucrata HOM05D004942 ORTHO05D005687 2.1e-69 268.5 285 48.4
vmacro10441 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 1.1e-67 262.7 486 39.1
Atru.chr11.1595 Acer truncatum HOM05D004942 ORTHO05D005687 8.2e-66 256.5 624 34.0
CSS0011617 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.8e-65 255.4 901 28.4
Atru.chr11.1596 Acer truncatum HOM05D004942 ORTHO05D005687 2.4e-65 255.0 265 47.5
CSS0007829 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 3.1e-65 254.6 904 28.1
TPR.G31934 Trifolium pratense HOM05D004942 ORTHO05D005687 3.6e-61 241.1 445 38.0
Actinidia27212 Actinidia chinensis HOM05D004942 ORTHO05D005687 2.0e-59 235.3 188 63.8
Actinidia28653 Actinidia chinensis HOM05D004942 ORTHO05D005687 4.4e-59 234.2 187 64.2
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 4.4e-59 234.2 439 34.6
TAR629G1720 Trochodendron aralioides HOM05D004942 ORTHO05D005687 3.8e-55 221.1 361 40.4
MSTRG.7735 Avicennia marina HOM05D004942 ORTHO05D005687 1.6e-53 215.7 114 87.7
Gohir.A12G159850 Gossypium hirsutum HOM05D004942 ORTHO05D005687 1.4e-49 202.6 265 47.5
CDE11G1026 Ceratophyllum demersum HOM05D004942 ORTHO05D005687 4.9e-42 177.6 490 27.1
SHI10798 Sapria himalayana HOM05D004942 ORTHO05D005687 1.1e-38 166.4 503 29.0
Gohir.D12G163150 Gossypium hirsutum HOM05D004942 ORTHO05D005687 2.8e-37 161.8 119 66.4
Gorai.012G127400 Gossypium raimondii HOM05D004942 ORTHO05D005687 5.2e-36 157.5 125 63.2
SEGI_21482 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 3.0e-31 141.7 291 36.4
SMO269G0037 Selaginella moellendorffii HOM05D004942 ORTHO05D005687 8.6e-31 140.2 1019 23.1
Mapoly0001s0391 Marchantia polymorpha HOM05D004942 ORTHO05D005687 5.6e-30 137.5 135 54.1
CSS0006420 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 5.8e-27 127.5 81 72.8
GSVIVG01026037001 Vitis vinifera HOM05D004942 ORTHO05D005687 3.0e-23 115.2 150 46.0
CSS0004641 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 6.6e-23 114.0 170 40.0
CSS0033973 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.9e-22 112.5 76 69.7
MBI16_g47661_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 5.2e-20 104.4 83 59.0
GSVIVG01015130001 Vitis vinifera HOM05D004942 ORTHO05D005687 7.3e-14 84.0 66 60.6
SHI10799 Sapria himalayana HOM05D004942 ORTHO05D005687 3.6e-13 81.6 86 52.3
Oeu028721.1 Olea europaea HOM05D004942 ORTHO05D005687 8.1e-13 80.5 116 44.0
Aqoxy4G01498 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 1.8e-12 79.3 80 51.2
GSVIVG01037061001 Vitis vinifera HOM05D004942 ORTHO05D005687 1.2e-11 76.6 65 56.9
GSVIVG01026043001 Vitis vinifera HOM05D004942 ORTHO05D005687 1.5e-11 76.3 65 56.9
Actinidia27213 Actinidia chinensis HOM05D004942 ORTHO05D005687 3.4e-11 75.1 176 35.2
Oeu028720.1 Olea europaea HOM05D004942 ORTHO05D005687 2.2e-10 72.4 142 39.4
SEGI_38362 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 2.2e-10 72.4 168 31.5
SHI10796 Sapria himalayana HOM05D004942 ORTHO05D005687 9.2e-09 67.0 170 28.2
Eucgr.G02429 Eucalyptus grandis HOM05D004942 ORTHO05D005687 1.9e-06 59.3 62 43.5


User provided reference genes

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