Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01167 Erythranthe guttata HOM05D008249 ORTHO05D010427 1.6e-52 209.1 108 100.0
Actinidia13403 Actinidia chinensis HOM05D000485 ORTHO05D000341 7.4e-13 77.4 108 50.0
unitig_22.g6892 Utricularia gibba HOM05D008249 ORTHO05D010427 1.1e-11 73.6 85 54.1
Hma1.2p1_0428F.1_g150880 Hydrangea macrophylla HOM05D008249 ORTHO05D010427 1.6e-10 69.7 107 42.1
Haze_11870 Corylus avellana HOM05D008249 ORTHO05D010427 1.0e-09 67.0 96 49.0
Ah.03g138650 Amaranthus hybridus HOM05D008249 ORTHO05D010427 3.8e-09 65.1 93 50.5
ClCG08G010570 Citrullus lanatus HOM05D008249 ORTHO05D010427 8.5e-09 63.9 98 45.9
Lj2g0003231 Lotus japonicus HOM05D008249 ORTHO05D010427 1.5e-08 63.2 102 44.1
Gohir.A03G106200 Gossypium hirsutum HOM05D008249 ORTHO05D010427 1.9e-08 62.8 108 44.4
CiPaw.05G122300 Carya illinoinensis HOM05D008249 ORTHO05D010427 2.5e-08 62.4 112 41.1
Nn3g17526 Nelumbo nucifera HOM05D008249 ORTHO05D010427 2.5e-08 62.4 99 46.5
Sabra10G0107000 Salix brachista HOM05D008249 ORTHO05D010427 4.2e-08 61.6 94 44.7
Thecc.02G323600 Theobroma cacao HOM05D008249 ORTHO05D010427 5.5e-08 61.2 110 43.6
VMungo1215G0100 Vigna mungo HOM05D008249 ORTHO05D010427 5.5e-08 61.2 105 46.7
Manes.05G112900 Manihot esculenta HOM05D008249 ORTHO05D010427 7.2e-08 60.8 93 47.3
COL.COLO4_27817 Corchorus olitorius HOM05D008249 ORTHO05D010427 9.4e-08 60.5 97 44.3
Glyma.02G122400 Glycine max HOM05D008249 ORTHO05D010427 2.1e-07 59.3 105 41.9
Prupe.1G293000 Prunus persica HOM05D008249 ORTHO05D010427 2.1e-07 59.3 90 45.6
Nn4g23529 Nelumbo nucifera HOM05D008249 ORTHO05D010427 3.6e-07 58.5 97 45.4
SGA_v2.0_scaffold16G07819 Striga asiatica HOM05D000037 ORTHO05D051382 4.7e-07 58.2 101 45.5
Glyma.01G064500 Glycine max HOM05D008249 ORTHO05D010427 6.1e-07 57.8 105 41.0
Gorai.005G147300 Gossypium raimondii HOM05D008249 ORTHO05D010427 8.0e-07 57.4 109 42.2
TPR.G38465 Trifolium pratense HOM05D008249 ORTHO05D010427 8.0e-07 57.4 96 42.7
Gohir.D02G131400 Gossypium hirsutum HOM05D008249 ORTHO05D010427 1.0e-06 57.0 109 42.2
Potri.010G138700 Populus trichocarpa HOM05D008249 ORTHO05D010427 1.0e-06 57.0 91 46.2
Medtr5g047220 Medicago truncatula HOM05D008249 ORTHO05D010427 2.3e-06 55.8 98 44.9
Ah.02g126730 Amaranthus hybridus HOM05D001602 ORTHO05D001470 3.0e-06 55.5 95 45.3
Manes.01G024800 Manihot esculenta HOM05D008249 ORTHO05D010427 4.0e-06 55.1 104 43.3
A02p15590 Brassica napus HOM05D008249 ORTHO05D010427 8.8e-06 53.9 80 46.2
C02p25760 Brassica napus HOM05D008249 ORTHO05D010427 8.8e-06 53.9 80 46.2
BolC2t08645H Brassica oleracea HOM05D008249 ORTHO05D010427 8.8e-06 53.9 80 46.2
BraA02t06620Z Brassica rapa HOM05D008249 ORTHO05D010427 8.8e-06 53.9 80 46.2
Phvul.003G038500 Phaseolus vulgaris HOM05D008249 ORTHO05D010427 8.8e-06 53.9 103 41.7


User provided reference genes

Program Settings