Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 1.2e-148 530.0 299 100.0
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 1.1e-109 400.6 299 74.9
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 3.4e-92 342.4 301 69.4
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 2.2e-91 339.7 248 74.2
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 4.3e-87 325.5 307 64.5
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 1.3e-86 323.9 281 69.8
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.6e-81 307.0 240 69.2
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 2.1e-81 306.6 304 60.2
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 3.6e-81 305.8 253 68.0
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 3.0e-80 302.8 225 70.7
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 1.5e-79 300.4 232 68.5
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 5.3e-77 292.0 299 55.5
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 5.3e-77 292.0 306 57.2
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 5.9e-76 288.5 274 58.8
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 5.9e-76 288.5 229 69.0
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 1.0e-75 287.7 244 66.0
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.0e-75 287.7 215 69.3
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 2.2e-75 286.6 253 62.1
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 2.9e-75 286.2 225 65.8
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 1.1e-74 284.3 239 64.0
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 1.9e-74 283.5 268 60.4
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 3.2e-74 282.7 278 56.1
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 3.2e-74 282.7 273 57.1
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 7.2e-74 281.6 267 58.4
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 9.4e-74 281.2 275 57.1
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 1.2e-73 280.8 261 60.5
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 1.6e-73 280.4 276 59.4
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 4.7e-73 278.9 224 65.6
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.0e-72 277.7 261 59.8
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 2.3e-72 276.6 221 67.0
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 5.2e-72 275.4 229 63.8
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 6.7e-72 275.0 241 59.8
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 8.8e-72 274.6 216 68.1
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 8.8e-72 274.6 270 58.9
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 1.1e-71 274.2 254 59.8
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 1.1e-71 274.2 256 58.2
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 2.0e-71 273.5 213 65.7
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 2.6e-71 273.1 230 63.5
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 2.6e-71 273.1 251 58.6
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 7.4e-71 271.6 265 60.8
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 9.7e-71 271.2 273 56.8
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 9.7e-71 271.2 259 57.5
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 1.7e-70 270.4 256 58.2
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 2.8e-70 269.6 219 67.1
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 3.7e-70 269.2 306 53.9
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 1.1e-69 267.7 272 58.1
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 1.8e-69 266.9 257 59.5
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 3.1e-69 266.2 220 63.6
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 4.1e-69 265.8 259 58.3
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 7.0e-69 265.0 212 64.6
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 9.1e-69 264.6 271 57.2
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 9.1e-69 264.6 211 66.4
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 1.2e-68 264.2 279 55.6
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 1.6e-68 263.8 258 58.5
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 1.6e-68 263.8 238 61.3
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 4.5e-68 262.3 275 55.3
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 7.7e-68 261.5 211 64.9
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 1.7e-67 260.4 315 49.8
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 1.7e-67 260.4 221 64.3
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 2.7e-65 253.1 281 54.4
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 3.6e-65 252.7 238 59.7
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 1.4e-64 250.8 275 54.5
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.4e-64 250.8 286 54.9
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 1.8e-64 250.4 193 67.9
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 3.0e-64 249.6 278 56.1
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 3.0e-64 249.6 239 55.6
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 4.0e-64 249.2 314 58.3
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 9.7e-63 244.6 217 62.2
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 3.7e-62 242.7 207 61.4
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 8.2e-62 241.5 175 69.7
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 3.1e-61 239.6 224 60.7
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 2.0e-60 236.9 314 47.8
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 4.5e-60 235.7 317 51.1
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 5.9e-60 235.3 271 52.8
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 1.0e-59 234.6 211 56.4
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 1.7e-59 233.8 226 55.3
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 5.0e-59 232.3 255 51.8
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 3.2e-58 229.6 211 55.9
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 4.2e-58 229.2 308 46.1
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 7.2e-58 228.4 344 46.2
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 7.2e-58 228.4 177 70.1
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 1.6e-57 227.3 189 64.0
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 2.7e-57 226.5 280 51.1
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 6.1e-57 225.3 257 52.5
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 1.0e-56 224.6 280 49.3
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 1.4e-56 224.2 238 55.9
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 8.8e-56 221.5 308 45.5
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.2e-55 221.1 267 53.6
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.5e-55 220.7 267 53.9
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 5.7e-55 218.8 202 55.9
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 1.7e-54 217.2 240 53.3
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 3.7e-54 216.1 233 55.4
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 4.8e-54 215.7 233 55.4
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 6.3e-54 215.3 171 66.1
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 7.0e-53 211.8 172 64.5
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 3.6e-49 199.5 171 64.3
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 6.8e-48 195.3 176 61.4
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 1.2e-47 194.5 202 56.4
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 4.1e-45 186.0 145 66.2
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 4.5e-44 182.6 141 67.4
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.7e-43 180.6 185 61.6
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 8.6e-43 178.3 185 61.1
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 6.8e-40 168.7 147 60.5
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 3.4e-39 166.4 208 44.2
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 3.5e-36 156.4 262 43.5
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 6.0e-36 155.6 152 57.9
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 1.0e-35 154.8 143 54.5
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 5.0e-35 152.5 111 71.2
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 8.0e-33 145.2 101 72.3
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 1.4e-32 144.4 184 44.6
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 4.0e-32 142.9 145 59.3
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 8.9e-32 141.7 266 42.9
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 8.1e-25 118.6 116 54.3
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 3.7e-22 109.8 135 51.1
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 8.3e-22 108.6 187 39.0
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 2.3e-19 100.5 176 33.0
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 7.3e-18 95.5 191 34.6
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 4.9e-14 82.8 81 56.8
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 4.2e-13 79.7 69 63.8
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 9.6e-10 68.6 93 45.2
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 1.4e-08 64.7 53 56.6
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 1.7e-06 57.8 44 68.2


User provided reference genes

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