Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01118 Erythranthe guttata HOM05D007320 ORTHO05D009290 3.2e-187 658.3 340 100.0
Migut.C00284 Erythranthe guttata HOM05D007320 ORTHO05D009290 1.1e-168 596.7 341 93.0
Migut.D01592 Erythranthe guttata HOM05D007320 ORTHO05D009290 1.4e-166 589.7 341 91.2
MSTRG.20317 Avicennia marina HOM05D007320 ORTHO05D009290 2.9e-111 406.0 321 67.6
SGA_v2.0_scaffold313G48283 Striga asiatica HOM05D007320 ORTHO05D009290 6.0e-109 398.3 355 62.0
SalBow8G4737 Salvia bowleyana HOM05D007320 ORTHO05D009290 8.1e-106 387.9 343 61.5
SalBow8G5340 Salvia bowleyana HOM05D007320 ORTHO05D009290 1.4e-102 377.1 343 60.1
CAN.G756.7 Capsicum annuum HOM05D007320 ORTHO05D009290 1.6e-101 373.6 312 61.9
PGSC0003DMG400001712 Solanum tuberosum HOM05D007320 ORTHO05D009290 6.0e-101 371.7 330 58.8
Solyc01g088490.3 Solanum lycopersicum HOM05D007320 ORTHO05D009290 1.1e-99 367.5 330 58.5
Cc05_g07980 Coffea canephora HOM05D007320 ORTHO05D009290 1.9e-99 366.7 333 60.4
Sopen01g035350 Solanum pennellii HOM05D007320 ORTHO05D009290 3.3e-99 365.9 330 58.2
Nitab4.5_0001895g0020 Nicotiana tabacum HOM05D007320 ORTHO05D009290 7.3e-99 364.8 301 61.8
Nitab4.5_0008210g0010 Nicotiana tabacum HOM05D007320 ORTHO05D009290 5.3e-97 358.6 324 57.1
Atru.chr6.2840 Acer truncatum HOM05D007320 ORTHO05D009290 7.6e-96 354.8 345 54.5
Oeu000571.1 Olea europaea HOM05D007320 ORTHO05D009290 7.6e-96 354.8 345 58.0
Ciclev10017507m.g Citrus clementina HOM05D007320 ORTHO05D009290 1.2e-93 347.4 331 55.6
Actinidia11122 Actinidia chinensis HOM05D007320 ORTHO05D009290 1.3e-92 344.0 335 56.4
CiPaw.04G130300 Carya illinoinensis HOM05D007320 ORTHO05D009290 2.3e-92 343.2 340 56.2
TWI59G0750 Tripterygium wilfordii HOM05D007320 ORTHO05D009290 5.6e-91 338.6 333 55.9
unitig_62.g23164 Utricularia gibba HOM05D007320 ORTHO05D009290 9.6e-91 337.8 333 57.4
HanXRQChr17g0565321 Helianthus annuus HOM05D007320 ORTHO05D009290 4.8e-90 335.5 346 50.6
Nn3g20750 Nelumbo nucifera HOM05D007320 ORTHO05D009290 1.1e-89 334.3 347 52.7
ClCG02G009070 Citrullus lanatus HOM05D007320 ORTHO05D009290 1.4e-89 334.0 329 52.9
Dinv15897 Davidia involucrata HOM05D007320 ORTHO05D009290 2.4e-89 333.2 345 55.1
Glyma.12G208100 Glycine max HOM05D007320 ORTHO05D009290 2.4e-89 333.2 339 52.2
ECA234G2345 Erigeron canadensis HOM05D007320 ORTHO05D009290 5.8e-88 328.6 341 51.0
Rhsim06G0135200 Rhododendron simsii HOM05D007320 ORTHO05D009290 1.3e-87 327.4 338 55.9
Hma1.2p1_0002F.1_g002500 Hydrangea macrophylla HOM05D007320 ORTHO05D009290 8.4e-87 324.7 323 55.7
Manes.13G139600 Manihot esculenta HOM05D007320 ORTHO05D009290 8.4e-87 324.7 343 52.5
Cpa.g.sc209.6 Carica papaya HOM05D007320 ORTHO05D009290 1.1e-86 324.3 319 55.2
Phvul.005G098950 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 3.2e-86 322.8 330 53.0
Hund07849 Selenicereus undatus HOM05D007320 ORTHO05D009290 5.5e-86 322.0 324 52.8
VMungo1080G0443 Vigna mungo HOM05D007320 ORTHO05D009290 7.1e-86 321.6 330 51.5
RcHm_v2.0_Chr0c20g0500221 Rosa chinensis HOM05D007320 ORTHO05D009290 1.6e-85 320.5 345 52.2
Gohir.A05G253000 Gossypium hirsutum HOM05D007320 ORTHO05D009290 2.7e-85 319.7 335 53.4
Gorai.009G266400 Gossypium raimondii HOM05D007320 ORTHO05D009290 2.7e-85 319.7 335 53.7
Gohir.D05G254900 Gossypium hirsutum HOM05D007320 ORTHO05D009290 3.5e-85 319.3 335 53.4
Ca_01474_v3 Cicer arietinum L. HOM05D007320 ORTHO05D009290 1.0e-84 317.8 320 54.1
CsaV3_2G004500 Cucumis sativus L. HOM05D007320 ORTHO05D009290 2.3e-84 316.6 331 51.1
Lalb_Chr25g0279081 Lupinus albus HOM05D007320 ORTHO05D009290 3.0e-84 316.2 331 50.5
GSVIVG01020656001 Vitis vinifera HOM05D007320 ORTHO05D009290 3.0e-84 316.2 314 56.1
Lj1P690T28 Lonicera japonica HOM05D007320 ORTHO05D009290 3.9e-84 315.8 338 54.4
vmacro12358 Vaccinium macrocarpon HOM05D007320 ORTHO05D009290 1.1e-83 314.3 336 53.9
Haze_13306 Corylus avellana HOM05D007320 ORTHO05D009290 2.8e-82 309.7 336 51.8
Lsat_1_v5_gn_4_28301 Lactuca sativa HOM05D007320 ORTHO05D009290 2.8e-82 309.7 299 53.5
Peaxi162Scf00745g00038 Petunia axillaris HOM05D007320 ORTHO05D009290 2.8e-82 309.7 330 53.0
Sed0016711 Sechium edule HOM05D007320 ORTHO05D009290 2.8e-82 309.7 339 50.4
Cfa014690 Carpinus fangiana HOM05D007320 ORTHO05D009290 4.8e-82 308.9 339 51.0
Aa31LG1G7290 Aethionema arabicum HOM05D007320 ORTHO05D009290 8.2e-82 308.1 314 51.9
TAR627G0001 Trochodendron aralioides HOM05D007320 ORTHO05D009290 8.2e-82 308.1 350 51.1
Dinv19981 Davidia involucrata HOM05D007320 ORTHO05D009290 1.1e-81 307.8 305 56.4
FAN10G1335 Fragaria x ananassa HOM05D007320 ORTHO05D009290 1.8e-81 307.0 345 49.6
FvH4_7g08410 Fragaria vesca HOM05D007320 ORTHO05D009290 3.1e-81 306.2 345 49.0
FAN10G4046 Fragaria x ananassa HOM05D007320 ORTHO05D009290 3.1e-81 306.2 345 49.3
MBI06_g25716_MAGBIO Magnolia biondii HOM05D007320 ORTHO05D009290 5.3e-81 305.4 335 52.2
CANSAT64G2476 Cannabis sativa HOM05D007320 ORTHO05D009290 1.2e-80 304.3 321 52.3
Lj3g0010689 Lotus japonicus HOM05D007320 ORTHO05D009290 2.0e-80 303.5 313 51.4
FAN03G0990 Fragaria x ananassa HOM05D007320 ORTHO05D009290 2.6e-80 303.1 343 48.7
COL.COLO4_26851 Corchorus olitorius HOM05D007320 ORTHO05D009290 5.8e-80 302.0 328 51.8
CSS0012636 Camellia sinensis var. sinensis HOM05D007320 ORTHO05D009290 7.6e-80 301.6 331 52.3
Medtr2g090885 Medicago truncatula HOM05D007320 ORTHO05D009290 2.9e-79 299.7 337 49.3
Prupe.3G125800 Prunus persica HOM05D007320 ORTHO05D009290 1.9e-78 297.0 345 49.3
Psat5g275040 Pisum sativum HOM05D007320 ORTHO05D009290 1.2e-77 294.3 339 49.9
THA.LOC104800856 Tarenaya hassleriana HOM05D007320 ORTHO05D009290 3.5e-77 292.7 336 50.9
Sabra13G0103100 Salix brachista HOM05D007320 ORTHO05D009290 4.6e-77 292.4 330 50.6
Thecc.08G174300 Theobroma cacao HOM05D007320 ORTHO05D009290 6.7e-76 288.5 328 50.3
TPR.G6440 Trifolium pratense HOM05D007320 ORTHO05D009290 9.7e-75 284.6 321 48.9
DCAR_013053 Daucus carota HOM05D007320 ORTHO05D009290 1.3e-74 284.3 313 50.8
MD09G1241100 Malus domestica HOM05D007320 ORTHO05D009290 2.8e-74 283.1 342 47.7
Carub.0001s0564 Capsella rubella HOM05D007320 ORTHO05D009290 6.3e-74 282.0 341 46.3
Potri.013G124100 Populus trichocarpa HOM05D007320 ORTHO05D009290 1.8e-73 280.4 330 49.1
EL10Ac2g02568 Beta vulgaris HOM05D007320 ORTHO05D009290 3.1e-73 279.6 337 46.9
Thhalv10008110m.g Eutrema salsugineum HOM05D007320 ORTHO05D009290 3.1e-73 279.6 341 46.6
CARHR005830 Cardamine hirsuta HOM05D007320 ORTHO05D009290 5.3e-73 278.9 341 46.3
AT1G06270 Arabidopsis thaliana HOM05D007320 ORTHO05D009290 2.0e-72 276.9 341 45.7
AL1G16280 Arabidopsis lyrata HOM05D007320 ORTHO05D009290 2.6e-72 276.6 341 46.3
Sc07g0005270 Simmondsia chinensis HOM05D007320 ORTHO05D009290 2.6e-72 276.6 319 51.7
C05p04580 Brassica napus HOM05D007320 ORTHO05D009290 4.5e-72 275.8 341 46.3
BcaB02g06809 Brassica carinata HOM05D007320 ORTHO05D009290 1.0e-71 274.6 314 48.7
BolC5t29229H Brassica oleracea HOM05D007320 ORTHO05D009290 1.7e-71 273.9 314 48.1
AUR62035379 Chenopodium quinoa HOM05D007320 ORTHO05D009290 1.7e-71 273.9 312 50.0
Sp1g05080 Schrenkiella parvula HOM05D007320 ORTHO05D009290 2.9e-71 273.1 341 46.9
BcaC05g24288 Brassica carinata HOM05D007320 ORTHO05D009290 1.1e-70 271.2 314 47.8
A10p04990 Brassica napus HOM05D007320 ORTHO05D009290 3.2e-70 269.6 341 45.2
BraA10t42760Z Brassica rapa HOM05D007320 ORTHO05D009290 3.2e-70 269.6 341 45.2
Eucgr.F01954 Eucalyptus grandis HOM05D007320 ORTHO05D009290 4.8e-66 255.8 312 45.8
SHI10502 Sapria himalayana HOM05D007320 ORTHO05D009290 1.3e-63 247.7 313 47.6
TPR.G5736 Trifolium pratense HOM05D007320 ORTHO05D009290 2.9e-63 246.5 321 45.2
PGR083G2305 Punica granatum HOM05D007320 ORTHO05D009290 1.5e-59 234.2 314 42.7
AUR62024073 Chenopodium quinoa HOM05D007320 ORTHO05D009290 4.7e-53 212.6 232 50.9
TPR.G34643 Trifolium pratense HOM05D007320 ORTHO05D009290 1.4e-52 211.1 216 50.9
MELO3C004341.2 Cucumis melo HOM05D007320 ORTHO05D009290 6.5e-47 192.2 230 46.1
arahy.Tifrunner.gnm1.ann1.CSM94Q Arachis hypogaea HOM05D007320 ORTHO05D009290 5.9e-40 169.1 162 52.5
SalBow7G0970 Salvia bowleyana HOM05D000555 ORTHO05D000646 4.2e-38 162.9 133 62.4
Phvul.005G098533 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 7.2e-38 162.2 171 52.0
arahy.Tifrunner.gnm1.ann1.66V1NK Arachis hypogaea HOM05D007320 ORTHO05D009290 2.6e-35 153.7 152 50.0
PGSC0003DMG401001710 Solanum tuberosum HOM05D007320 ORTHO05D009290 4.1e-33 146.4 113 64.6
Cpa.g.sc209.4 Carica papaya HOM05D007320 ORTHO05D009290 2.8e-29 133.7 169 49.1
Sc21g0003330 Simmondsia chinensis HOM05D007320 ORTHO05D009290 1.7e-23 114.4 160 46.9
Sc21g0003340 Simmondsia chinensis HOM05D007320 ORTHO05D009290 1.7e-23 114.4 99 59.6
Dinv15900 Davidia involucrata HOM05D007320 ORTHO05D009290 1.6e-21 107.8 183 40.4
MELO3C021360.2 Cucumis melo HOM05D007320 ORTHO05D009290 5.0e-15 86.3 145 36.6
arahy.Tifrunner.gnm1.ann1.5PR57S Arachis hypogaea HOM05D007320 ORTHO05D009290 6.2e-13 79.3 104 48.1
Lalb_Chr10g0091291 Lupinus albus HOM05D008684 ORTHO05D010796 3.5e-08 63.5 233 24.0
Ca_08075_v3 Cicer arietinum L. HOM05D008684 ORTHO05D010796 1.0e-07 62.0 237 24.9
Medtr7g082160 Medicago truncatula HOM05D008684 ORTHO05D010796 6.6e-07 59.3 237 24.5
PSO541G2034 Papaver somniferum HOM05D000424 ORTHO05D000355 1.1e-06 58.5 185 23.8
Cpa.g.sc8.109 Carica papaya HOM05D007486 ORTHO05D003673 2.5e-06 57.4 193 24.4
TPR.G29077 Trifolium pratense HOM05D008684 ORTHO05D010796 3.3e-06 57.0 215 24.2
Atru.chr3.942 Acer truncatum HOM05D007700 ORTHO05D009669 5.6e-06 56.2 136 24.3


User provided reference genes

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