Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01097 Erythranthe guttata HOM05D004326 ORTHO05D004570 9.7e-19 95.9 52 100.0
Migut.K01265 Erythranthe guttata HOM05D004326 ORTHO05D004570 2.8e-10 67.8 56 71.4
MELO3C008521.2 Cucumis melo HOM05D004326 ORTHO05D004570 8.3e-10 66.2 46 76.1
Gohir.D13G069701 Gossypium hirsutum HOM05D004326 ORTHO05D004570 7.0e-09 63.2 44 72.7
MD16G1048200 Malus domestica HOM05D004326 ORTHO05D004570 7.0e-09 63.2 51 70.6
TWI31G0110 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 7.0e-09 63.2 52 71.2
CAN.G184.91 Capsicum annuum HOM05D004326 ORTHO05D004570 9.1e-09 62.8 44 77.3
Gohir.A13G053100 Gossypium hirsutum HOM05D004326 ORTHO05D004570 9.1e-09 62.8 44 72.7
Potri.010G129600 Populus trichocarpa HOM05D004326 ORTHO05D004570 9.1e-09 62.8 50 70.0
Atru.chr11.1355 Acer truncatum HOM05D004326 ORTHO05D004570 1.2e-08 62.4 48 66.7
Gorai.008G186200 Gossypium raimondii HOM05D004326 ORTHO05D004570 1.2e-08 62.4 48 66.7
Prupe.1G305400 Prunus persica HOM05D004326 ORTHO05D004570 1.2e-08 62.4 52 69.2
Gohir.A12G170400 Gossypium hirsutum HOM05D004326 ORTHO05D004570 1.6e-08 62.0 48 64.6
Gohir.D12G173600 Gossypium hirsutum HOM05D004326 ORTHO05D004570 1.6e-08 62.0 52 69.2
TWI79G1601 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 1.6e-08 62.0 45 77.8
MD13G1046500 Malus domestica HOM05D004326 ORTHO05D004570 2.0e-08 61.6 51 68.6
Thecc.02G361000 Theobroma cacao HOM05D004326 ORTHO05D004570 2.0e-08 61.6 44 72.7
Prupe.3G240100 Prunus persica HOM05D004326 ORTHO05D004570 2.7e-08 61.2 52 59.6
PGR119G2456 Punica granatum HOM05D004326 ORTHO05D004570 2.7e-08 61.2 48 68.8
THA.LOC104805244 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 2.7e-08 61.2 44 75.0
THA.LOC104825713 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 2.7e-08 61.2 44 75.0
RcHm_v2.0_Chr2g0163211 Rosa chinensis HOM05D004326 ORTHO05D004570 3.5e-08 60.8 50 62.0
CANSAT64G1998 Cannabis sativa HOM05D004326 ORTHO05D004570 4.5e-08 60.5 48 64.6
Glyma.20G185900 Glycine max HOM05D004326 ORTHO05D004570 4.5e-08 60.5 44 75.0
Phvul.007G102250 Phaseolus vulgaris HOM05D004326 ORTHO05D004570 4.5e-08 60.5 44 75.0
Oeu058414.1 Olea europaea HOM05D004326 ORTHO05D004570 5.9e-08 60.1 44 72.7
Potri.008G116700 Populus trichocarpa HOM05D004326 ORTHO05D004570 5.9e-08 60.1 50 66.0
Duzib251G0285 Durio zibethinus HOM05D004326 ORTHO05D004570 7.7e-08 59.7 44 68.2
Gohir.A07G168701 Gossypium hirsutum HOM05D004326 ORTHO05D004570 7.7e-08 59.7 54 61.1
Gohir.D07G179500 Gossypium hirsutum HOM05D004326 ORTHO05D004570 7.7e-08 59.7 54 61.1
Gorai.001G200500 Gossypium raimondii HOM05D004326 ORTHO05D004570 7.7e-08 59.7 54 61.1
PSO478G3685 Papaver somniferum HOM05D004326 ORTHO05D004570 7.7e-08 59.7 50 64.0
CiPaw.15G003600 Carya illinoinensis HOM05D004326 ORTHO05D004570 1.3e-07 58.9 44 68.2
Glyma.10G204600 Glycine max HOM05D004326 ORTHO05D004570 1.3e-07 58.9 44 72.7
Lalb_Chr17g0341881 Lupinus albus HOM05D004326 ORTHO05D004570 1.3e-07 58.9 52 61.5
Manes.14G097600 Manihot esculenta HOM05D004326 ORTHO05D004570 1.3e-07 58.9 50 66.0
Duzib268G0802 Durio zibethinus HOM05D004326 ORTHO05D004570 1.7e-07 58.5 50 62.0
Medtr1g093650 Medicago truncatula HOM05D004326 ORTHO05D004570 1.7e-07 58.5 47 66.0
PSO017G5195 Papaver somniferum HOM05D004326 ORTHO05D004570 2.2e-07 58.2 49 61.2
PGR042G3431 Punica granatum HOM05D004326 ORTHO05D004570 2.9e-07 57.8 45 66.7
Glyma.01G088000 Glycine max HOM05D004326 ORTHO05D004570 3.8e-07 57.4 45 71.1
Glyma.02G100100 Glycine max HOM05D004326 ORTHO05D004570 3.8e-07 57.4 45 71.1
PGR102G0365 Punica granatum HOM05D004326 ORTHO05D004570 3.8e-07 57.4 48 68.8
Lalb_Chr06g0170221 Lupinus albus HOM05D004326 ORTHO05D004570 5.0e-07 57.0 44 65.9
FvH4_6g45391 Fragaria vesca HOM05D004326 ORTHO05D004570 6.5e-07 56.6 35 77.1
FAN14G2544 Fragaria x ananassa HOM05D004326 ORTHO05D004570 6.5e-07 56.6 35 77.1
FAN14G3188 Fragaria x ananassa HOM05D004326 ORTHO05D004570 6.5e-07 56.6 35 77.1
Lalb_Chr02g0151761 Lupinus albus HOM05D004326 ORTHO05D004570 6.5e-07 56.6 41 65.9
Lalb_Chr10g0099751 Lupinus albus HOM05D004326 ORTHO05D004570 6.5e-07 56.6 52 61.5
Thecc.04G138400 Theobroma cacao HOM05D004326 ORTHO05D004570 6.5e-07 56.6 52 61.5
AL1G24940 Arabidopsis lyrata HOM05D004326 ORTHO05D004570 8.5e-07 56.2 42 69.0
AT1G13245 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 8.5e-07 56.2 42 69.0
CARHR013620 Cardamine hirsuta HOM05D004326 ORTHO05D004570 8.5e-07 56.2 48 60.4
PSO063G2411 Papaver somniferum HOM05D004326 ORTHO05D004570 8.5e-07 56.2 48 64.6
PSO782G5714 Papaver somniferum HOM05D004326 ORTHO05D004570 8.5e-07 56.2 48 64.6
THA.LOC109116167 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 8.5e-07 56.2 50 60.0
AT3G25717 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 1.1e-06 55.8 32 84.4
A06p42560 Brassica napus HOM05D004326 ORTHO05D004570 1.1e-06 55.8 32 84.4
A09p24960 Brassica napus HOM05D004326 ORTHO05D004570 1.1e-06 55.8 32 84.4
BraA06t27171Z Brassica rapa HOM05D004326 ORTHO05D004570 1.1e-06 55.8 32 84.4
BraA09t38084Z Brassica rapa HOM05D004326 ORTHO05D004570 1.1e-06 55.8 32 84.4
Carub.0005s0354 Capsella rubella HOM05D004326 ORTHO05D004570 1.1e-06 55.8 32 84.4
Eucgr.G02348 Eucalyptus grandis HOM05D004326 ORTHO05D004570 1.1e-06 55.8 53 60.4
Manes.06G072200 Manihot esculenta HOM05D004326 ORTHO05D004570 1.1e-06 55.8 52 63.5
Zm00001eb294730 Zea mays HOM05D047758 ORTHO05D004570 1.1e-06 55.8 28 92.9
A06p08510 Brassica napus HOM05D004326 ORTHO05D004570 1.5e-06 55.5 48 60.4
C05p10110 Brassica napus HOM05D004326 ORTHO05D004570 1.5e-06 55.5 48 60.4
ClCG03G009910 Citrullus lanatus HOM05D004326 ORTHO05D004570 1.5e-06 55.5 39 69.2
A08p32390 Brassica napus HOM05D004326 ORTHO05D004570 1.9e-06 55.1 46 63.0
Carub.0002s1541 Capsella rubella HOM05D004326 ORTHO05D004570 1.9e-06 55.1 34 73.5
THA.LOC109117025 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 1.9e-06 55.1 45 64.4
AL2G27790 Arabidopsis lyrata HOM05D004326 ORTHO05D004570 2.5e-06 54.7 44 68.2
AT1G68825 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 2.5e-06 54.7 44 68.2
C06p37300 Brassica napus HOM05D004326 ORTHO05D004570 2.5e-06 54.7 44 68.2
BolC5t29757H Brassica oleracea HOM05D004326 ORTHO05D004570 2.5e-06 54.7 42 69.0
BraA06t24046Z Brassica rapa HOM05D004326 ORTHO05D004570 2.5e-06 54.7 42 69.0
BraA08t35162Z Brassica rapa HOM05D004326 ORTHO05D004570 2.5e-06 54.7 42 69.0
Carub.0001s1297 Capsella rubella HOM05D004326 ORTHO05D004570 2.5e-06 54.7 48 58.3
Duzib138G0964 Durio zibethinus HOM05D004326 ORTHO05D004570 2.5e-06 54.7 50 58.0
BolC8t49226H Brassica oleracea HOM05D004326 ORTHO05D004570 4.2e-06 53.9 42 69.0
Manes.01G107900 Manihot esculenta HOM05D004326 ORTHO05D004570 4.2e-06 53.9 39 64.1
CiPaw.03G059200 Carya illinoinensis HOM05D004326 ORTHO05D004570 5.5e-06 53.5 34 73.5
Glyma.10G129200 Glycine max HOM05D004326 ORTHO05D004570 7.2e-06 53.1 44 68.2
C08p16040 Brassica napus HOM05D004326 ORTHO05D004570 9.5e-06 52.8 46 60.9
Glyma.08G256500 Glycine max HOM05D004326 ORTHO05D004570 9.5e-06 52.8 44 61.4
PSO063G2252 Papaver somniferum HOM05D004326 ORTHO05D004570 9.5e-06 52.8 31 83.9


User provided reference genes

Program Settings