Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.7e-93 345.9 161 100.0
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 8.6e-90 333.6 157 98.7
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 4.9e-77 291.2 157 82.2
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 8.3e-77 290.4 157 82.2
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 8.3e-77 290.4 157 82.8
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.1e-76 290.0 157 82.2
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 1.4e-76 289.7 157 81.5
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 2.4e-76 288.9 157 81.5
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 4.1e-76 288.1 159 81.1
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 5.4e-76 287.7 159 81.1
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 2.7e-75 285.4 157 80.3
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 3.5e-75 285.0 159 79.9
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 3.5e-75 285.0 159 80.5
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 6.0e-75 284.3 157 80.3
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 6.0e-75 284.3 157 82.2
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 7.8e-75 283.9 157 79.6
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 1.0e-74 283.5 159 78.6
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 1.3e-74 283.1 157 82.2
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 1.3e-74 283.1 157 79.0
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 1.7e-74 282.7 157 79.6
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 1.7e-74 282.7 159 79.2
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 2.3e-74 282.3 157 79.6
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 3.9e-74 281.6 157 80.9
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 3.9e-74 281.6 157 80.9
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 3.9e-74 281.6 156 81.4
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 5.1e-74 281.2 157 79.6
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 5.1e-74 281.2 159 78.0
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 6.6e-74 280.8 159 78.0
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 8.6e-74 280.4 156 79.5
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 8.6e-74 280.4 157 79.0
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 1.5e-73 279.6 159 77.4
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 2.5e-73 278.9 159 78.0
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 2.5e-73 278.9 156 78.8
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.3e-73 278.5 157 78.3
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 3.3e-73 278.5 156 78.8
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 4.3e-73 278.1 157 78.3
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 4.3e-73 278.1 157 78.3
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 4.3e-73 278.1 156 78.8
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 4.3e-73 278.1 157 80.3
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 5.6e-73 277.7 157 78.3
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 5.6e-73 277.7 157 78.3
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 7.3e-73 277.3 159 74.8
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 7.3e-73 277.3 157 77.7
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 7.3e-73 277.3 159 78.6
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 9.5e-73 276.9 157 79.6
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 1.2e-72 276.6 157 78.3
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 1.2e-72 276.6 157 77.1
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 1.6e-72 276.2 181 72.4
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 4.7e-72 274.6 160 79.4
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 4.7e-72 274.6 157 77.1
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 6.2e-72 274.2 157 76.4
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 1.4e-71 273.1 156 76.9
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.4e-71 273.1 156 77.6
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 1.4e-71 273.1 157 77.1
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 1.8e-71 272.7 157 77.1
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.4e-71 272.3 156 79.5
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 3.1e-71 271.9 157 74.5
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 3.1e-71 271.9 159 76.7
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 4.0e-71 271.6 159 76.7
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 5.2e-71 271.2 157 76.4
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 6.8e-71 270.8 154 77.3
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 6.8e-71 270.8 154 77.3
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 8.9e-71 270.4 157 76.4
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 1.2e-70 270.0 157 74.5
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 1.5e-70 269.6 154 76.6
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 1.5e-70 269.6 157 75.8
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 2.0e-70 269.2 157 75.8
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 2.0e-70 269.2 154 77.3
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 2.6e-70 268.9 157 75.2
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 3.4e-70 268.5 154 76.6
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 3.4e-70 268.5 154 76.0
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 3.4e-70 268.5 157 75.2
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 5.8e-70 267.7 154 76.6
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 7.6e-70 267.3 157 73.9
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 9.9e-70 266.9 154 76.6
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 1.3e-69 266.5 154 76.0
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 1.3e-69 266.5 154 75.3
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 1.3e-69 266.5 157 74.5
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 3.8e-69 265.0 157 73.9
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 6.4e-69 264.2 157 75.2
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 8.4e-69 263.8 186 67.7
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.1e-68 263.5 157 72.0
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 4.1e-68 261.5 157 71.3
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 7.1e-68 260.8 203 62.6
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 1.2e-67 260.0 157 73.9
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 4.6e-67 258.1 159 72.3
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 1.9e-65 252.7 211 59.2
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 1.6e-64 249.6 159 69.2
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 3.6e-64 248.4 156 72.4
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 5.2e-63 244.6 138 79.0
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 2.9e-61 238.8 136 79.4
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 1.6e-59 233.0 158 64.6
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 8.1e-56 220.7 273 44.0
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 2.0e-54 216.1 156 59.0
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 1.7e-53 213.0 156 61.5
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 3.2e-52 208.8 157 63.7
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 1.2e-51 206.8 156 62.8
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 1.5e-49 199.9 156 60.3
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 1.5e-49 199.9 169 58.6
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 4.0e-47 191.8 158 57.0
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.5e-46 189.9 157 58.6
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 9.9e-46 187.2 120 70.8
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 7.9e-43 177.6 176 52.8
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 3.3e-41 172.2 96 82.3
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 9.6e-41 170.6 108 71.3
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 1.7e-37 159.8 158 48.7
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 3.8e-29 132.1 75 76.0
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 5.9e-22 108.2 157 38.2
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 1.3e-21 107.1 65 70.8
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 2.9e-21 105.9 62 72.6
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 3.2e-20 102.4 167 37.1
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 3.6e-19 99.0 64 62.5
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 2.0e-17 93.2 167 34.7
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 2.2e-16 89.7 62 56.5
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 5.0e-13 78.6 71 50.7


User provided reference genes

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