Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01043 Erythranthe guttata HOM05D006037 ORTHO05D007384 2.4e-281 971.5 476 100.0
MSTRG.7652 Avicennia marina HOM05D006037 ORTHO05D007384 1.4e-212 743.0 489 74.6
SGA_v2.0_scaffold38G14964 Striga asiatica HOM05D006037 ORTHO05D000229 1.3e-197 693.3 476 71.6
SalBow8G4457 Salvia bowleyana HOM05D006037 ORTHO05D007384 4.3e-190 668.3 481 68.4
SalBow8G2496 Salvia bowleyana HOM05D006037 ORTHO05D007384 1.3e-189 666.8 481 68.4
Solyc05g009140.3 Solanum lycopersicum HOM05D006037 ORTHO05D007384 1.6e-176 623.2 487 65.1
Cc11_g09830 Coffea canephora HOM05D006037 ORTHO05D007384 8.8e-175 617.5 481 61.5
unitig_747.g21203 Utricularia gibba HOM05D006037 ORTHO05D007384 7.5e-174 614.4 489 63.8
MD16G1039700 Malus domestica HOM05D006037 ORTHO05D007384 3.8e-170 602.1 484 61.4
Sopen05g004860 Solanum pennellii HOM05D006037 ORTHO05D007384 1.9e-169 599.7 471 64.3
CSS0045711 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 3.2e-169 599.0 471 63.3
CSS0026176 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 5.5e-169 598.2 471 63.3
Nitab4.5_0005528g0030 Nicotiana tabacum HOM05D006037 ORTHO05D007384 5.5e-169 598.2 518 61.2
GSVIVG01011862001 Vitis vinifera HOM05D006037 ORTHO05D007384 2.3e-167 592.8 484 61.2
HanXRQChr17g0551931 Helianthus annuus HOM05D006037 ORTHO05D007384 8.8e-167 590.9 486 60.9
Nitab4.5_0001616g0090 Nicotiana tabacum HOM05D006037 ORTHO05D007384 2.6e-166 589.3 518 60.6
RcHm_v2.0_Chr4g0434781 Rosa chinensis HOM05D006037 ORTHO05D007384 1.3e-165 587.0 486 59.9
Lsat_1_v5_gn_3_57741 Lactuca sativa HOM05D006037 ORTHO05D007384 3.7e-165 585.5 471 61.6
Prupe.1G314400 Prunus persica HOM05D006037 ORTHO05D007384 1.4e-164 583.6 486 59.7
CAN.G610.57 Capsicum annuum HOM05D006037 ORTHO05D007384 1.8e-164 583.2 472 63.3
DCAR_007255 Daucus carota HOM05D006037 ORTHO05D007384 1.8e-164 583.2 474 61.6
FAN12G3404 Fragaria x ananassa HOM05D006037 ORTHO05D007384 2.4e-164 582.8 484 59.3
Ciclev10014910m.g Citrus clementina HOM05D006037 ORTHO05D007384 7.0e-164 581.3 472 60.0
Lalb_Chr06g0165941 Lupinus albus HOM05D006037 ORTHO05D007384 1.0e-162 577.4 488 59.8
Peaxi162Scf00753g00122 Petunia axillaris HOM05D006037 ORTHO05D007384 1.0e-162 577.4 464 63.6
arahy.Tifrunner.gnm1.ann1.NA36PT Arachis hypogaea HOM05D006037 ORTHO05D007384 2.2e-162 576.2 473 60.5
Psat6g225720 Pisum sativum HOM05D006037 ORTHO05D007384 2.9e-162 575.9 486 59.3
Potri.010G122000 Populus trichocarpa HOM05D006037 ORTHO05D007384 5.0e-162 575.1 484 59.1
TAR622G1007 Trochodendron aralioides HOM05D006037 ORTHO05D007384 5.0e-162 575.1 474 60.8
Aqoxy3G00235 Aquilegia oxysepala HOM05D006037 ORTHO05D007384 8.5e-162 574.3 473 59.8
arahy.Tifrunner.gnm1.ann1.CBB0MY Arachis hypogaea HOM05D006037 ORTHO05D007384 8.5e-162 574.3 473 60.0
Rhsim09G0105100 Rhododendron simsii HOM05D006037 ORTHO05D007384 8.5e-162 574.3 467 60.8
FvH4_4g26975 Fragaria vesca HOM05D006037 ORTHO05D007384 1.5e-161 573.5 473 59.2
CiPaw.05G240100 Carya illinoinensis HOM05D006037 ORTHO05D007384 1.9e-161 573.2 472 59.7
Manes.14G105200 Manihot esculenta HOM05D006037 ORTHO05D007384 7.2e-161 571.2 484 58.5
ECA246G3707 Erigeron canadensis HOM05D006037 ORTHO05D007384 1.2e-160 570.5 471 59.9
Lj5g0002773 Lotus japonicus HOM05D006037 ORTHO05D007384 1.2e-160 570.5 486 59.1
MD13G1039000 Malus domestica HOM05D006037 ORTHO05D007384 1.2e-160 570.5 463 60.7
TPR.G4859 Trifolium pratense HOM05D006037 ORTHO05D007384 1.2e-160 570.5 484 58.7
Thecc.02G224800 Theobroma cacao HOM05D006037 ORTHO05D007384 5.2e-159 565.1 481 58.4
Atru.chr11.165 Acer truncatum HOM05D006037 ORTHO05D007384 2.0e-158 563.1 463 60.0
FAN22G1751 Fragaria x ananassa HOM05D006037 ORTHO05D007384 4.4e-158 562.0 463 60.3
Sabra10G0092100 Salix brachista HOM05D006037 ORTHO05D007384 5.7e-158 561.6 499 57.1
Sabra10G0092200 Salix brachista HOM05D006037 ORTHO05D007384 2.2e-157 559.7 472 58.7
Potri.010G122100 Populus trichocarpa HOM05D006037 ORTHO05D007384 4.9e-157 558.5 472 58.9
Glyma.20G118000 Glycine max HOM05D006037 ORTHO05D007384 1.1e-156 557.4 492 56.5
Medtr1g110300 Medicago truncatula HOM05D006037 ORTHO05D007384 9.2e-156 554.3 477 58.5
Phvul.007G029700 Phaseolus vulgaris HOM05D006037 ORTHO05D007384 1.6e-155 553.5 490 56.1
Haze_00627 Corylus avellana HOM05D006037 ORTHO05D007384 1.7e-154 550.1 530 54.2
Duzib248G1272 Durio zibethinus HOM05D006037 ORTHO05D007384 2.3e-154 549.7 477 56.8
Eucgr.B02995 Eucalyptus grandis HOM05D006037 ORTHO05D007384 5.0e-154 548.5 486 56.6
Gohir.D02G171000 Gossypium hirsutum HOM05D006037 ORTHO05D007384 4.3e-153 545.4 481 57.2
Nn3g17908 Nelumbo nucifera HOM05D006037 ORTHO05D007384 1.2e-152 543.9 470 58.1
Gorai.005G192200 Gossypium raimondii HOM05D006037 ORTHO05D007384 4.7e-152 542.0 476 57.1
Gohir.A03G147800 Gossypium hirsutum HOM05D006037 ORTHO05D007384 1.0e-151 540.8 481 56.8
VMungo0720G2449 Vigna mungo HOM05D006037 ORTHO05D007384 2.0e-150 536.6 468 57.1
Actinidia14911 Actinidia chinensis HOM05D006037 ORTHO05D007384 7.5e-150 534.6 470 58.3
PSO478G0980 Papaver somniferum HOM05D006037 ORTHO05D007384 2.2e-149 533.1 472 57.2
COL.COLO4_38215 Corchorus olitorius HOM05D006037 ORTHO05D007384 2.9e-149 532.7 464 57.3
Lj3C1012T17 Lonicera japonica HOM05D006037 ORTHO05D007384 2.9e-149 532.7 459 59.3
PSO017G5347 Papaver somniferum HOM05D006037 ORTHO05D007384 3.7e-149 532.3 472 57.0
PGR102G0142 Punica granatum HOM05D006037 ORTHO05D007384 3.7e-149 532.3 474 56.8
vmacro10580 Vaccinium macrocarpon HOM05D006037 ORTHO05D007384 1.6e-147 526.9 547 51.2
CANSAT01G2894 Cannabis sativa HOM05D006037 ORTHO05D007384 1.7e-146 523.5 474 56.3
MBI09_g07743_MAGBIO Magnolia biondii HOM05D006037 ORTHO05D007384 2.3e-146 523.1 474 55.7
THA.LOC104821921 Tarenaya hassleriana HOM05D006037 ORTHO05D007384 1.5e-145 520.4 472 55.3
TWI31G0909 Tripterygium wilfordii HOM05D006037 ORTHO05D007384 3.1e-143 512.7 458 57.2
Ca_11141_v3 Cicer arietinum L. HOM05D006037 ORTHO05D007384 8.3e-141 504.6 492 53.3
Ca_11146_v3 Cicer arietinum L. HOM05D006037 ORTHO05D007384 8.3e-141 504.6 492 53.3
AUR62037303 Chenopodium quinoa HOM05D006037 ORTHO05D007384 1.1e-140 504.2 486 55.1
EL10Ac6g14338 Beta vulgaris HOM05D006037 ORTHO05D007384 3.2e-140 502.7 472 54.7
TAR622G1402 Trochodendron aralioides HOM05D006037 ORTHO05D007384 3.2e-140 502.7 426 59.4
AUR62002838 Chenopodium quinoa HOM05D006037 ORTHO05D007384 2.7e-139 499.6 486 54.5
ATR1125G090 Amborella trichopoda HOM05D006037 ORTHO05D007384 8.1e-136 488.0 475 53.1
Thhalv10007371m.g Eutrema salsugineum HOM05D006037 ORTHO05D007384 1.5e-134 483.8 474 51.7
Aa31LG7G9120 Aethionema arabicum HOM05D006037 ORTHO05D007384 2.9e-133 479.6 476 51.9
AUR62002836 Chenopodium quinoa HOM05D006037 ORTHO05D007384 3.7e-133 479.2 474 55.3
AL1G39950 Arabidopsis lyrata HOM05D006037 ORTHO05D007384 2.1e-131 473.4 474 50.4
AUR62037301 Chenopodium quinoa HOM05D006037 ORTHO05D007384 2.1e-131 473.4 590 45.9
AT1G25375 Arabidopsis thaliana HOM05D006037 ORTHO05D007384 2.3e-130 469.9 474 50.0
Carub.0001s2514 Capsella rubella HOM05D006037 ORTHO05D007384 5.1e-130 468.8 475 51.6
C05p25140 Brassica napus HOM05D006037 ORTHO05D007384 1.9e-129 466.8 474 50.4
BolC5t31246H Brassica oleracea HOM05D006037 ORTHO05D007384 7.3e-129 464.9 474 50.2
BcaC05g26674 Brassica carinata HOM05D006037 ORTHO05D007384 8.1e-128 461.5 472 49.8
Zm00001eb125200 Zea mays HOM05D006037 ORTHO05D007384 5.2e-127 458.8 483 51.8
A09p39240 Brassica napus HOM05D006037 ORTHO05D007384 6.8e-127 458.4 475 49.9
BraA09t39423Z Brassica rapa HOM05D006037 ORTHO05D007384 6.8e-127 458.4 475 49.9
CDE12G0065 Ceratophyllum demersum HOM05D006037 ORTHO05D007384 5.4e-124 448.7 489 48.9
Os01g0133500 Oryza sativa ssp. japonica HOM05D006037 ORTHO05D007384 3.5e-123 446.0 487 50.1
PGSC0003DMG401014554 Solanum tuberosum HOM05D006037 ORTHO05D007384 6.6e-122 441.8 354 61.3
Cpa.g.sc65.52 Carica papaya HOM05D006037 ORTHO05D007384 7.3e-121 438.3 469 48.6
Aa31LG7G9130 Aethionema arabicum HOM05D006037 ORTHO05D007384 8.7e-114 414.8 434 48.2
Sc11g0003550 Simmondsia chinensis HOM05D006037 ORTHO05D007384 8.7e-114 414.8 334 60.5
Dinv21054 Davidia involucrata HOM05D006037 ORTHO05D007384 1.6e-112 410.6 328 60.7
BcaC05g26470 Brassica carinata HOM05D006037 ORTHO05D007384 4.5e-110 402.5 462 47.0
QL01p040434 Quercus lobata HOM05D006037 ORTHO05D007384 4.3e-97 359.4 304 58.6
CARHR026110 Cardamine hirsuta HOM05D006037 ORTHO05D007384 5.6e-97 359.0 357 51.0
FAN07G1837 Fragaria x ananassa HOM05D006037 ORTHO05D007384 1.1e-92 344.7 292 57.9
Mapoly0042s0034 Marchantia polymorpha HOM05D006037 ORTHO05D007384 4.3e-89 332.8 490 39.0
Pp3c15_25940 Physcomitrium patens HOM05D006037 ORTHO05D007384 2.5e-81 307.0 483 37.5
AagrBONN_evm.TU.Sc2ySwM_117.146 Anthoceros agrestis HOM05D006037 ORTHO05D007384 1.4e-79 301.2 487 38.0
RcHm_v2.0_Chr5g0042931 Rosa chinensis HOM05D006037 ORTHO05D007384 6.5e-69 265.8 278 52.5
RcHm_v2.0_Chr7g0243441 Rosa chinensis HOM05D006037 ORTHO05D007384 6.5e-69 265.8 278 52.5
HPP92_008271 Vanilla planifolia HOM05D006037 ORTHO05D007384 1.1e-65 255.0 201 57.2
SMO164G0020 Selaginella moellendorffii HOM05D006037 ORTHO05D007384 2.0e-65 254.2 291 44.0
RcHm_v2.0_Chr6g0261541 Rosa chinensis HOM05D006037 ORTHO05D007384 1.1e-63 248.4 267 51.7
Ah.02g127690 Amaranthus hybridus HOM05D006037 ORTHO05D007384 3.1e-63 246.9 473 34.7
QL02p008150 Quercus lobata HOM05D006037 ORTHO05D007384 1.3e-53 214.9 206 53.4
QL01p040421 Quercus lobata HOM05D006037 ORTHO05D007384 8.0e-51 205.7 267 44.6
CBR_g162 Chara braunii HOM05D006037 ORTHO05D007384 3.4e-49 200.3 356 37.1
BcaC05g26471 Brassica carinata HOM05D006037 ORTHO05D007384 5.4e-47 193.0 227 47.1
Hma1.2p1_1024F.1_g249230 Hydrangea macrophylla HOM05D006037 ORTHO05D007384 5.6e-36 156.4 302 34.4
QL02p008246 Quercus lobata HOM05D006037 ORTHO05D007384 1.9e-23 114.8 92 57.6
Hma1.2p1_1024F.1_g249220 Hydrangea macrophylla HOM05D006037 ORTHO05D007384 1.5e-20 105.1 86 66.3
QL02p008285 Quercus lobata HOM05D000178 ORTHO05D007384 2.5e-20 104.4 85 62.4
SEGI_36031 Sequoiadendron giganteum HOM05D006037 ORTHO05D007384 3.6e-19 100.5 123 42.3
Oeu054976.1 Olea europaea HOM05D006037 ORTHO05D007384 2.3e-18 97.8 67 73.1
CSS0004694 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 1.3e-16 92.0 61 67.2
CSS0019302 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 3.7e-16 90.5 61 67.2
HPP92_008272 Vanilla planifolia HOM05D006037 ORTHO05D007384 1.1e-15 89.0 91 46.2
RcHm_v2.0_Chr2g0108931 Rosa chinensis HOM05D006037 ORTHO05D007384 3.2e-15 87.4 62 61.3
CSS0047987 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 7.1e-15 86.3 61 67.2
CSS0027478 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 9.2e-15 85.9 61 63.9
CSS0028236 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 9.2e-15 85.9 61 63.9
SEGI_35277 Sequoiadendron giganteum HOM05D006037 ORTHO05D007384 2.1e-14 84.7 67 59.7
SEGI_25624 Sequoiadendron giganteum HOM05D006037 ORTHO05D007384 7.3e-12 76.3 144 32.6
Lsat_1_v5_gn_7_98681 Lactuca sativa HOM05D006037 ORTHO05D007384 1.2e-11 75.5 65 60.0
QL02p008273 Quercus lobata HOM05D006037 ORTHO05D007384 2.8e-11 74.3 40 80.0
ECA247G1102 Erigeron canadensis HOM05D003337 ORTHO05D003808 3.2e-07 60.8 136 30.9
CSS0043972 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 4.6e-06 57.0 61 49.2


User provided reference genes

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