Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 8.6e-64 246.9 131 100.0
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.4e-50 203.0 111 96.4
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.7e-43 179.5 117 83.8
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 3.6e-38 161.8 132 68.9
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 7.6e-36 154.1 132 65.9
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 1.3e-35 153.3 133 66.9
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 2.2e-35 152.5 130 60.8
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 2.4e-34 149.1 131 64.1
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.7e-33 145.6 129 65.1
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 3.5e-33 145.2 133 60.9
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 7.9e-33 144.1 129 65.1
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 1.0e-32 143.7 127 59.8
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 1.3e-32 143.3 129 63.6
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 1.7e-32 142.9 114 63.2
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 2.3e-32 142.5 129 60.5
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 3.0e-32 142.1 127 59.1
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 3.9e-32 141.7 129 64.3
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 5.1e-32 141.4 129 57.4
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 8.7e-32 140.6 129 63.6
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 1.5e-31 139.8 129 57.4
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 1.5e-31 139.8 129 62.8
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 2.5e-31 139.0 130 56.9
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 2.5e-31 139.0 129 62.8
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 7.4e-31 137.5 128 57.0
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 7.4e-31 137.5 137 62.0
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 9.6e-31 137.1 131 55.7
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 1.1e-29 133.7 132 55.3
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 1.1e-29 133.7 132 57.6
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 1.1e-29 133.7 133 55.6
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 2.4e-29 132.5 109 62.4
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 2.4e-29 132.5 109 62.4
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 2.4e-29 132.5 111 61.3
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 4.0e-29 131.7 132 57.6
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 5.3e-29 131.3 114 66.7
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 2.6e-28 129.0 131 56.5
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 3.4e-28 128.6 130 54.6
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 4.5e-28 128.3 130 55.4
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 4.5e-28 128.3 130 51.5
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 7.6e-28 127.5 130 54.6
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 9.9e-28 127.1 117 57.3
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 1.7e-27 126.3 123 58.5
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 1.7e-27 126.3 116 60.3
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 2.9e-27 125.6 129 53.5
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 3.8e-27 125.2 133 53.4
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 3.8e-27 125.2 100 64.0
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 3.8e-27 125.2 102 63.7
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 3.8e-27 125.2 131 54.2
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 3.8e-27 125.2 126 55.6
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 3.8e-27 125.2 126 55.6
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 4.9e-27 124.8 133 53.4
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 4.9e-27 124.8 108 63.0
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 6.4e-27 124.4 134 55.2
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 6.4e-27 124.4 123 61.0
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 6.4e-27 124.4 120 55.0
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 6.4e-27 124.4 125 56.0
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 8.4e-27 124.0 130 51.5
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 1.4e-26 123.2 114 57.9
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 1.9e-26 122.9 133 52.6
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 1.9e-26 122.9 133 52.6
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 1.9e-26 122.9 127 57.5
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 2.4e-26 122.5 117 58.1
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 2.4e-26 122.5 101 60.4
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 3.2e-26 122.1 133 51.9
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 3.2e-26 122.1 133 51.9
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 4.2e-26 121.7 131 52.7
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 5.5e-26 121.3 129 55.8
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 7.1e-26 120.9 123 52.8
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 7.1e-26 120.9 113 55.8
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 7.1e-26 120.9 96 62.5
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 9.3e-26 120.6 123 54.5
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 9.3e-26 120.6 129 51.9
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 1.2e-25 120.2 110 58.2
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 1.2e-25 120.2 121 55.4
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 1.6e-25 119.8 129 51.9
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.6e-25 119.8 126 54.0
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 2.1e-25 119.4 97 59.8
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 2.7e-25 119.0 124 52.4
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 2.7e-25 119.0 130 52.3
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 3.5e-25 118.6 130 50.0
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 3.5e-25 118.6 130 50.0
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 3.5e-25 118.6 130 50.0
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 4.6e-25 118.2 133 51.1
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 6.0e-25 117.9 129 48.1
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 6.0e-25 117.9 132 49.2
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 7.9e-25 117.5 133 49.6
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 1.0e-24 117.1 130 50.0
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 1.0e-24 117.1 122 51.6
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 1.0e-24 117.1 123 52.8
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 1.3e-24 116.7 120 54.2
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 3.0e-24 115.5 98 58.2
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 3.0e-24 115.5 126 51.6
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 3.0e-24 115.5 129 49.6
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 5.1e-24 114.8 129 50.4
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 8.7e-24 114.0 127 52.8
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 8.7e-24 114.0 100 57.0
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 4.3e-23 111.7 132 50.8
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 4.3e-23 111.7 124 50.8
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 1.6e-22 109.8 118 55.9
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 6.2e-22 107.8 119 52.1
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 8.1e-22 107.5 121 47.9
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 1.1e-21 107.1 112 49.1
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 1.4e-21 106.7 133 45.1
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 1.4e-21 106.7 114 53.5
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 2.4e-21 105.9 121 47.1
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 5.3e-21 104.8 131 47.3
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 5.3e-21 104.8 114 52.6
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 2.0e-20 102.8 86 61.6
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.3e-19 100.1 109 51.4
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 2.9e-19 99.0 70 67.1
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 8.4e-19 97.4 91 49.5
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 7.1e-18 94.4 108 50.0
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 1.6e-17 93.2 106 47.2
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 6.7e-16 87.8 64 67.2
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 1.5e-15 86.7 83 51.8
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 9.6e-15 84.0 64 67.2
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 4.8e-14 81.6 89 56.2
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 1.4e-13 80.1 100 42.0
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 1.2e-12 77.0 81 46.9
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 1.5e-12 76.6 106 39.6
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 3.4e-12 75.5 112 41.1
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 1.7e-11 73.2 85 44.7
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 2.7e-09 65.9 85 47.1
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 2.3e-08 62.8 106 37.7
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 2.3e-08 62.8 125 32.0
Ah.15g097910 Amaranthus hybridus HOM05D012832 ORTHO05D019522 3.3e-07 58.9 43 55.8
Ah.15g098350 Amaranthus hybridus HOM05D012832 ORTHO05D019522 3.3e-07 58.9 43 55.8


User provided reference genes

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