Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.9e-52 208.4 111 100.0
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.6e-50 202.6 111 96.4
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 4.6e-42 174.5 111 87.4
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 3.5e-34 148.3 110 75.5
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 3.9e-33 144.8 110 71.8
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 5.1e-33 144.4 111 74.8
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 1.5e-32 142.9 108 67.6
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 2.5e-32 142.1 108 71.3
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 4.3e-32 141.4 107 67.3
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 2.1e-31 139.0 107 68.2
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 2.8e-31 138.7 106 65.1
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 6.2e-31 137.5 107 67.3
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 6.2e-31 137.5 104 72.1
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 1.1e-30 136.7 104 72.1
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.8e-30 136.0 101 73.3
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 1.8e-30 136.0 104 71.2
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 1.8e-30 136.0 104 71.2
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 3.1e-30 135.2 104 71.2
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 4.0e-30 134.8 109 64.2
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 9.0e-30 133.7 109 70.6
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 1.5e-29 132.9 110 63.6
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 2.6e-29 132.1 106 68.9
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 5.8e-29 131.0 101 65.3
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 7.6e-29 130.6 103 66.0
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 7.6e-29 130.6 103 66.0
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 9.9e-29 130.2 99 74.7
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 9.9e-29 130.2 108 63.0
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 2.9e-28 128.6 108 63.0
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 2.9e-28 128.6 106 64.2
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 8.4e-28 127.1 102 65.7
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 8.4e-28 127.1 105 64.8
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 1.1e-27 126.7 105 62.9
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 1.4e-27 126.3 107 63.6
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 4.2e-27 124.8 100 65.0
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 4.2e-27 124.8 96 66.7
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 5.5e-27 124.4 101 63.4
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 7.1e-27 124.0 102 63.7
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 9.3e-27 123.6 106 61.3
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 9.3e-27 123.6 103 62.1
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 1.6e-26 122.9 107 63.6
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 1.6e-26 122.9 102 64.7
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.1e-26 122.5 107 61.7
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 2.1e-26 122.5 107 61.7
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 2.1e-26 122.5 102 64.7
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 2.7e-26 122.1 101 64.4
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 2.7e-26 122.1 101 61.4
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 4.6e-26 121.3 83 71.1
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 6.0e-26 120.9 101 63.4
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 6.0e-26 120.9 105 59.0
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 6.0e-26 120.9 102 63.7
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 6.0e-26 120.9 98 61.2
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 6.0e-26 120.9 96 63.5
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 1.0e-25 120.2 100 62.0
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 1.3e-25 119.8 103 61.2
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 1.8e-25 119.4 97 62.9
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 1.8e-25 119.4 110 59.1
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 1.8e-25 119.4 103 60.2
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 2.3e-25 119.0 103 60.2
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 3.0e-25 118.6 96 64.6
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 3.0e-25 118.6 105 59.0
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 3.0e-25 118.6 102 61.8
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 3.9e-25 118.2 101 59.4
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 3.9e-25 118.2 101 59.4
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 3.9e-25 118.2 101 59.4
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 3.9e-25 118.2 101 59.4
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 3.9e-25 118.2 100 67.0
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 3.9e-25 118.2 102 59.8
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 5.1e-25 117.9 101 59.4
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 5.1e-25 117.9 101 59.4
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 5.1e-25 117.9 107 60.7
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 6.7e-25 117.5 106 58.5
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 6.7e-25 117.5 108 59.3
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 6.7e-25 117.5 101 58.4
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 8.7e-25 117.1 104 60.6
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 1.1e-24 116.7 85 67.1
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 1.5e-24 116.3 109 58.7
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 2.5e-24 115.5 102 59.8
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 3.3e-24 115.2 95 61.1
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 3.3e-24 115.2 95 61.1
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 3.3e-24 115.2 95 61.1
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 3.3e-24 115.2 106 59.4
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 4.3e-24 114.8 95 61.1
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 4.3e-24 114.8 86 69.8
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 4.3e-24 114.8 89 61.8
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 9.6e-24 113.6 95 61.1
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 9.6e-24 113.6 95 61.1
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 9.6e-24 113.6 104 56.7
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 9.6e-24 113.6 100 58.0
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 1.3e-23 113.2 108 54.6
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 2.1e-23 112.5 95 58.9
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 2.1e-23 112.5 107 58.9
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 2.1e-23 112.5 95 58.9
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 1.4e-22 109.8 99 58.6
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 1.8e-22 109.4 97 59.8
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 1.8e-22 109.4 107 56.1
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 3.1e-22 108.6 111 56.8
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 4.0e-22 108.2 106 57.5
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 9.0e-22 107.1 104 57.7
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 2.0e-21 105.9 96 55.2
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 2.6e-21 105.5 99 52.5
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 3.4e-21 105.1 95 60.0
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 5.8e-21 104.4 97 55.7
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 7.6e-21 104.0 105 56.2
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.3e-20 103.2 96 54.2
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 1.3e-20 103.2 95 58.9
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 8.4e-20 100.5 86 60.5
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 1.4e-19 99.8 69 71.0
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 2.5e-19 99.0 96 54.2
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 1.6e-18 96.3 104 51.0
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 2.1e-18 95.9 91 50.5
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 1.8e-17 92.8 106 48.1
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 1.5e-16 89.7 64 70.3
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.9e-16 89.4 88 54.5
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.2e-15 85.9 64 70.3
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 2.4e-14 82.4 103 44.7
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 2.0e-13 79.3 97 44.3
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 7.6e-13 77.4 87 44.8
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 1.3e-12 76.6 78 48.7
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 3.8e-12 75.1 67 64.2
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 8.5e-12 73.9 106 44.3
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 1.4e-11 73.2 85 45.9
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 1.1e-08 63.5 66 53.0
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 1.3e-07 60.1 106 36.8
Ah.15g097910 Amaranthus hybridus HOM05D012832 ORTHO05D019522 2.2e-07 59.3 43 60.5
Ah.15g098350 Amaranthus hybridus HOM05D012832 ORTHO05D019522 2.2e-07 59.3 43 60.5
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 3.7e-07 58.5 109 31.2


User provided reference genes

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