Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00989 Erythranthe guttata HOM05D007874 ORTHO05D009614 2.3e-51 205.7 139 100.0
Migut.F00186 Erythranthe guttata HOM05D007874 ORTHO05D009614 4.7e-44 181.4 138 93.5
MSTRG.901 Avicennia marina HOM05D007874 ORTHO05D009614 3.1e-19 99.0 133 51.9
Cc11_g08720 Coffea canephora HOM05D007874 ORTHO05D009614 1.2e-15 87.0 130 53.1
Dinv05171 Davidia involucrata HOM05D007874 ORTHO05D009614 3.0e-14 82.4 120 48.3
Oeu039508.1 Olea europaea HOM05D007874 ORTHO05D009614 8.1e-12 74.3 45 75.6
Hma1.2p1_0096F.1_g047930 Hydrangea macrophylla HOM05D007874 ORTHO05D009614 1.4e-11 73.6 137 45.3
Rhsim09G0067000 Rhododendron simsii HOM05D007874 ORTHO05D009614 1.2e-10 70.5 131 52.7
SalBow8G5073 Salvia bowleyana HOM05D007874 ORTHO05D009614 1.2e-10 70.5 48 68.8
Nitab4.5_0000742g0160 Nicotiana tabacum HOM05D007874 ORTHO05D009614 2.6e-10 69.3 149 37.6
Peaxi162Scf00137g00121 Petunia axillaris HOM05D007874 ORTHO05D009614 7.6e-10 67.8 135 34.8
Lsat_1_v5_gn_3_54800 Lactuca sativa HOM05D007874 ORTHO05D009614 1.7e-09 66.6 110 37.3
Nitab4.5_0002523g0020 Nicotiana tabacum HOM05D007874 ORTHO05D009614 2.2e-09 66.2 136 35.3
Nitab4.5_0001832g0080 Nicotiana tabacum HOM05D007874 ORTHO05D009614 3.8e-09 65.5 144 52.8
Peaxi162Scf00159g00054 Petunia axillaris HOM05D007874 ORTHO05D009614 3.2e-08 62.4 46 60.9
BcaB03g14859 Brassica carinata HOM05D007874 ORTHO05D009614 5.4e-08 61.6 144 50.0
Manes.15G127500 Manihot esculenta HOM05D007874 ORTHO05D009614 7.1e-08 61.2 130 39.2
SGA_v2.0_scaffold39G15167 Striga asiatica HOM05D007874 ORTHO05D009614 7.1e-08 61.2 147 39.5
MSTRG.2170 Avicennia marina HOM05D007874 ORTHO05D009614 1.6e-07 60.1 41 65.9
BcaB05g24626 Brassica carinata HOM05D007874 ORTHO05D009614 2.1e-07 59.7 142 45.8
Thhalv10019301m.g Eutrema salsugineum HOM05D007874 ORTHO05D009614 3.5e-07 58.9 140 42.9
CARHR064260 Cardamine hirsuta HOM05D007874 ORTHO05D009614 7.9e-07 57.8 136 33.1
DCAR_026776 Daucus carota HOM05D007874 ORTHO05D009614 7.9e-07 57.8 133 41.4
MSTRG.13588 Avicennia marina HOM05D007874 ORTHO05D009614 1.0e-06 57.4 42 61.9
AL2G30530 Arabidopsis lyrata HOM05D007874 ORTHO05D009614 1.3e-06 57.0 124 47.6
DCAR_030219 Daucus carota HOM05D007874 ORTHO05D009614 1.7e-06 56.6 137 46.7
CiPaw.05G249700 Carya illinoinensis HOM05D007874 ORTHO05D009614 8.7e-06 54.3 147 29.9
Potri.010G113100 Populus trichocarpa HOM05D007874 ORTHO05D009614 8.7e-06 54.3 132 53.0


User provided reference genes

Program Settings