Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00875 Erythranthe guttata HOM05D000189 ORTHO05D007859 8.1e-79 297.0 147 100.0
Migut.L00584 Erythranthe guttata HOM05D000189 ORTHO05D007859 9.4e-43 177.2 133 69.9
Migut.L00266 Erythranthe guttata HOM05D000189 ORTHO05D007859 6.1e-42 174.5 129 70.5
SalBow7G4190 Salvia bowleyana HOM05D000189 ORTHO05D007859 1.1e-27 127.1 126 54.8
CAN.G1464.5 Capsicum annuum HOM05D000189 ORTHO05D007859 1.3e-20 103.6 62 71.0
Cc00_g14750 Coffea canephora HOM05D000189 ORTHO05D007859 1.3e-20 103.6 65 73.8
HanXRQChr01g0019121 Helianthus annuus HOM05D000189 ORTHO05D007859 4.2e-19 98.6 87 56.3
MD00G1127500 Malus domestica HOM05D000189 ORTHO05D007859 1.6e-18 96.7 84 57.1
Eucgr.I00040 Eucalyptus grandis HOM05D000189 ORTHO05D007859 3.6e-18 95.5 62 67.7
Hma1.2p1_0073F.1_g038450 Hydrangea macrophylla HOM05D000189 ORTHO05D007859 3.6e-18 95.5 83 60.2
Thecc.01G143200 Theobroma cacao HOM05D000189 ORTHO05D007859 4.7e-18 95.1 64 67.2
FvH4_1g25640 Fragaria vesca HOM05D000189 ORTHO05D007859 1.0e-17 94.0 88 54.5
FAN19G0214 Fragaria x ananassa HOM05D000189 ORTHO05D007859 1.0e-17 94.0 88 54.5
SGA_v2.0_scaffold244G44343 Striga asiatica HOM05D000189 ORTHO05D007859 1.0e-17 94.0 117 45.3
ECA248G3490 Erigeron canadensis HOM05D000552 ORTHO05D007859 1.4e-17 93.6 64 65.6
Lsat_1_v5_gn_1_80940 Lactuca sativa HOM05D000189 ORTHO05D007859 1.8e-17 93.2 87 58.6
Manes.17G018825 Manihot esculenta HOM05D000189 ORTHO05D007859 2.3e-17 92.8 86 54.7
Prupe.4G282400 Prunus persica HOM05D000189 ORTHO05D007859 2.3e-17 92.8 81 56.8
unitig_60.g25691 Utricularia gibba HOM05D000189 ORTHO05D007859 3.0e-17 92.4 81 59.3
Medtr3g097060 Medicago truncatula HOM05D000189 ORTHO05D007859 4.0e-17 92.0 97 49.5
Sopen05g034990 Solanum pennellii HOM05D000189 ORTHO05D007859 5.2e-17 91.7 80 53.8
ClCG04G001170 Citrullus lanatus HOM05D000189 ORTHO05D007859 6.8e-17 91.3 87 55.2
FAN28G0421 Fragaria x ananassa HOM05D000189 ORTHO05D007859 6.8e-17 91.3 87 54.0
TPR.G7871 Trifolium pratense HOM05D000189 ORTHO05D007859 1.5e-16 90.1 97 49.5
THA.LOC104800276 Tarenaya hassleriana HOM05D000189 ORTHO05D007859 2.0e-16 89.7 87 56.3
FAN26G1447 Fragaria x ananassa HOM05D000189 ORTHO05D007859 3.4e-16 89.0 88 52.3
Sed0009877 Sechium edule HOM05D000189 ORTHO05D007859 3.4e-16 89.0 92 52.2
Dinv06652 Davidia involucrata HOM05D000189 ORTHO05D007859 4.4e-16 88.6 65 64.6
Rhsim10G0130500 Rhododendron simsii HOM05D000189 ORTHO05D007859 4.4e-16 88.6 65 66.2
TAR628G1698 Trochodendron aralioides HOM05D000189 ORTHO05D007859 4.4e-16 88.6 87 54.0
DCAR_019974 Daucus carota HOM05D000189 ORTHO05D007859 5.7e-16 88.2 65 63.1
Psat5g058320 Pisum sativum HOM05D000189 ORTHO05D007859 5.7e-16 88.2 93 51.6
Glyma.04G206900 Glycine max HOM05D000189 ORTHO05D007859 7.5e-16 87.8 97 50.5
CSS0023610 Camellia sinensis var. sinensis HOM05D000189 ORTHO05D007859 9.8e-16 87.4 85 56.5
Phvul.009G151700 Phaseolus vulgaris HOM05D000189 ORTHO05D007859 9.8e-16 87.4 75 58.7
AL6G19440 Arabidopsis lyrata HOM05D000189 ORTHO05D007859 1.3e-15 87.0 86 53.5
ECA248G1047 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.3e-15 87.0 71 57.7
Gorai.003G068400 Gossypium raimondii HOM05D000189 ORTHO05D007859 1.3e-15 87.0 81 55.6
COL.COLO4_12122 Corchorus olitorius HOM05D000189 ORTHO05D007859 1.7e-15 86.7 88 51.1
Gohir.A11G224808 Gossypium hirsutum HOM05D000189 ORTHO05D007859 1.7e-15 86.7 81 55.6
Sp6g34160 Schrenkiella parvula HOM05D000189 ORTHO05D007859 1.7e-15 86.7 82 56.1
VMungo1309G2054 Vigna mungo HOM05D014460 ORTHO05D007859 1.7e-15 86.7 93 49.5
Carub.0006s0768 Capsella rubella HOM05D000189 ORTHO05D007859 2.2e-15 86.3 86 53.5
Gohir.D11G229200 Gossypium hirsutum HOM05D000189 ORTHO05D007859 2.2e-15 86.3 89 51.7
Lj1g0005687 Lotus japonicus HOM05D000189 ORTHO05D007859 2.2e-15 86.3 85 54.1
RcHm_v2.0_Chr2g0123961 Rosa chinensis HOM05D000189 ORTHO05D007859 2.2e-15 86.3 91 50.5
Actinidia06600 Actinidia chinensis HOM05D000189 ORTHO05D007859 4.9e-15 85.1 86 53.5
BraA02t04966Z Brassica rapa HOM05D000189 ORTHO05D007859 4.9e-15 85.1 81 56.8
Thhalv10013591m.g Eutrema salsugineum HOM05D000189 ORTHO05D007859 4.9e-15 85.1 86 53.5
Potri.005G071000 Populus trichocarpa HOM05D000189 ORTHO05D007859 4.9e-15 85.1 85 49.4
GSVIVG01022385001 Vitis vinifera HOM05D000189 ORTHO05D007859 4.9e-15 85.1 89 53.9
Sc09g0002050 Simmondsia chinensis HOM05D000189 ORTHO05D007859 8.3e-15 84.3 66 62.1
Ca_17006_v3 Cicer arietinum L. HOM05D000189 ORTHO05D007859 1.1e-14 84.0 96 52.1
CARHR204300 Cardamine hirsuta HOM05D000189 ORTHO05D007859 1.4e-14 83.6 85 51.8
arahy.Tifrunner.gnm1.ann1.50NT7J Arachis hypogaea HOM05D000189 ORTHO05D007859 1.8e-14 83.2 85 52.9
arahy.Tifrunner.gnm1.ann1.682KPN Arachis hypogaea HOM05D000189 ORTHO05D007859 1.8e-14 83.2 85 52.9
AT5G08710 Arabidopsis thaliana HOM05D000189 ORTHO05D007859 2.4e-14 82.8 86 51.2
CiPaw.04G179600 Carya illinoinensis HOM05D000189 ORTHO05D007859 2.4e-14 82.8 87 49.4
Lalb_Chr08g0237931 Lupinus albus HOM05D000189 ORTHO05D007859 2.4e-14 82.8 64 60.9
EL10Ac4g09653 Beta vulgaris HOM05D000189 ORTHO05D007859 3.1e-14 82.4 80 53.8
BcaC03g13240 Brassica carinata HOM05D000189 ORTHO05D007859 3.1e-14 82.4 83 56.6
Peaxi162Scf00925g00013 Petunia axillaris HOM05D000189 ORTHO05D007859 3.1e-14 82.4 81 49.4
AUR62006916 Chenopodium quinoa HOM05D000189 ORTHO05D007859 4.1e-14 82.0 80 53.8
QL10p039723 Quercus lobata HOM05D000189 ORTHO05D007859 4.1e-14 82.0 61 60.7
BcaB05g21570 Brassica carinata HOM05D000189 ORTHO05D007859 5.4e-14 81.6 86 50.0
AUR62000563 Chenopodium quinoa HOM05D000189 ORTHO05D007859 5.4e-14 81.6 80 53.8
Nn5g28246 Nelumbo nucifera HOM05D000189 ORTHO05D007859 5.4e-14 81.6 87 50.6
Atru.chr4.1118 Acer truncatum HOM05D000189 ORTHO05D007859 9.2e-14 80.9 87 51.7
Ah.02g117830 Amaranthus hybridus HOM05D000189 ORTHO05D007859 1.2e-13 80.5 64 59.4
MBI03_g11131_MAGBIO Magnolia biondii HOM05D000189 ORTHO05D007859 1.2e-13 80.5 64 60.9
C02p03720 Brassica napus HOM05D000189 ORTHO05D007859 1.6e-13 80.1 82 56.1
BolC2t06332H Brassica oleracea HOM05D000189 ORTHO05D007859 1.6e-13 80.1 82 56.1
TWI79G0061 Tripterygium wilfordii HOM05D000189 ORTHO05D007859 2.0e-13 79.7 66 57.6
Aqoxy5G02356 Aquilegia oxysepala HOM05D000189 ORTHO05D007859 3.5e-13 79.0 64 59.4
Sabra05G0058100 Salix brachista HOM05D000189 ORTHO05D007859 4.5e-13 78.6 94 47.9
Haze_25388 Corylus avellana HOM05D000189 ORTHO05D007859 1.0e-12 77.4 102 45.1
Oeu042314.1 Olea europaea HOM05D000189 ORTHO05D007859 5.0e-12 75.1 108 40.7
A05p19680 Brassica napus HOM05D000189 ORTHO05D007859 8.6e-12 74.3 59 59.3
BraA05t20873Z Brassica rapa HOM05D000189 ORTHO05D007859 8.6e-12 74.3 59 59.3
Zm00001eb197640 Zea mays HOM05D000189 ORTHO05D007859 3.3e-11 72.4 96 49.0
PSO210G6791 Papaver somniferum HOM05D000189 ORTHO05D007859 7.3e-11 71.2 81 48.1
SEGI_34887 Sequoiadendron giganteum HOM05D000189 ORTHO05D007859 4.7e-10 68.6 87 46.0
Os11g0545800 Oryza sativa ssp. japonica HOM05D000189 ORTHO05D007859 6.1e-10 68.2 66 54.5
PGR119G1265 Punica granatum HOM05D000189 ORTHO05D007859 2.3e-09 66.2 105 42.9
ATR0709G034 Amborella trichopoda HOM05D000189 ORTHO05D007859 6.8e-09 64.7 58 58.6
AagrBONN_evm.TU.Sc2ySwM_344.533 Anthoceros agrestis HOM05D000189 ORTHO05D007859 2.0e-08 63.2 80 46.2
Mapoly0001s0080 Marchantia polymorpha HOM05D000189 ORTHO05D007859 8.3e-07 57.8 93 40.9
SMO144G0111 Selaginella moellendorffii HOM05D000189 ORTHO05D007859 1.1e-06 57.4 84 40.5
Os01g0846800 Oryza sativa ssp. japonica HOM05D002600 ORTHO05D003013 3.2e-06 55.8 82 29.3
Zm00001eb148070 Zea mays HOM05D002600 ORTHO05D003013 5.4e-06 55.1 82 28.0
Zm00001eb367810 Zea mays HOM05D002600 ORTHO05D003013 5.4e-06 55.1 82 28.0
Lalb_Chr19g0125181 Lupinus albus HOM05D002600 ORTHO05D003013 7.0e-06 54.7 82 31.7


User provided reference genes

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