Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00826 Erythranthe guttata HOM05D005467 ORTHO05D006523 1.0e-238 829.7 421 100.0
Migut.L00653 Erythranthe guttata HOM05D005467 ORTHO05D006523 3.2e-237 824.7 421 99.0
Cfa008565 Carpinus fangiana HOM05D005467 ORTHO05D006523 9.2e-184 647.1 419 74.7
Hma1.2p1_0114F.1_g055340 Hydrangea macrophylla HOM05D005467 ORTHO05D006523 9.2e-184 647.1 423 74.9
Actinidia14942 Actinidia chinensis HOM05D005467 ORTHO05D006523 5.9e-183 644.4 414 76.8
CSS0047900 Camellia sinensis var. sinensis HOM05D005467 ORTHO05D006523 6.6e-182 641.0 412 76.2
Potri.010G116200 Populus trichocarpa HOM05D005467 ORTHO05D006523 1.2e-180 636.7 410 75.6
GSVIVG01011792001 Vitis vinifera HOM05D005467 ORTHO05D006523 1.4e-179 633.3 410 75.1
Ciclev10015390m.g Citrus clementina HOM05D005467 ORTHO05D006523 2.3e-179 632.5 410 74.1
FvH4_4g26200 Fragaria vesca HOM05D005467 ORTHO05D006523 3.1e-179 632.1 419 73.3
CiPaw.05G246600 Carya illinoinensis HOM05D005467 ORTHO05D006523 4.0e-179 631.7 419 74.2
PGR119G0286 Punica granatum HOM05D005467 ORTHO05D006523 8.9e-179 630.6 417 73.1
MD16G1031500 Malus domestica HOM05D005467 ORTHO05D006523 4.4e-178 628.2 419 72.6
RcHm_v2.0_Chr4g0433781 Rosa chinensis HOM05D005467 ORTHO05D006523 4.4e-178 628.2 419 73.3
TWI31G0476 Tripterygium wilfordii HOM05D005467 ORTHO05D006523 1.3e-177 626.7 416 72.8
FAN07G0694 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.9e-176 622.9 419 72.8
Thecc.02G211500 Theobroma cacao HOM05D005467 ORTHO05D006523 2.4e-176 622.5 413 72.4
Gorai.012G123600 Gossypium raimondii HOM05D005467 ORTHO05D006523 3.2e-176 622.1 414 72.7
Nn3g18021 Nelumbo nucifera HOM05D005467 ORTHO05D006523 1.6e-175 619.8 419 71.4
QL01p002615 Quercus lobata HOM05D005467 ORTHO05D006523 1.6e-175 619.8 501 63.7
TAR629G1677 Trochodendron aralioides HOM05D005467 ORTHO05D006523 1.0e-174 617.1 419 71.4
Sabra10G0087600 Salix brachista HOM05D005467 ORTHO05D006523 1.7e-174 616.3 437 70.5
Manes.06G062500 Manihot esculenta HOM05D005467 ORTHO05D006523 2.3e-174 615.9 410 72.4
Gohir.A04G099200 Gossypium hirsutum HOM05D005467 ORTHO05D006523 3.0e-174 615.5 414 72.2
Glyma.10G266400 Glycine max HOM05D005467 ORTHO05D006523 1.9e-173 612.8 410 71.2
Sabra10G0086000 Salix brachista HOM05D005467 ORTHO05D006523 1.9e-173 612.8 441 69.6
SGA_v2.0_scaffold50G18532 Striga asiatica HOM05D005467 ORTHO05D006523 3.3e-173 612.1 452 70.1
Peaxi162Scf00205g00928 Petunia axillaris HOM05D005467 ORTHO05D006523 2.1e-172 609.4 412 71.6
arahy.Tifrunner.gnm1.ann1.U1J3BU Arachis hypogaea HOM05D005467 ORTHO05D006523 2.8e-172 609.0 404 71.8
Rhsim09G0101300 Rhododendron simsii HOM05D005467 ORTHO05D006523 8.1e-172 607.4 464 67.9
HanXRQChr15g0477671 Helianthus annuus HOM05D005467 ORTHO05D006523 3.1e-171 605.5 416 70.7
Sed0008724 Sechium edule HOM05D005467 ORTHO05D006523 1.5e-170 603.2 419 70.2
Lj6C750G3 Lonicera japonica HOM05D005467 ORTHO05D006523 2.0e-170 602.8 408 73.0
Glyma.20G124100 Glycine max HOM05D005467 ORTHO05D006523 2.6e-170 602.4 416 70.2
Eucgr.G02222 Eucalyptus grandis HOM05D005467 ORTHO05D006523 5.8e-170 601.3 408 71.3
MSTRG.879 Avicennia marina HOM05D005467 ORTHO05D006523 7.5e-170 600.9 359 83.0
Phvul.007G035400 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 1.3e-169 600.1 410 70.2
VMungo0720G1946 Vigna mungo HOM05D005467 ORTHO05D006523 1.7e-169 599.7 410 69.5
Lj5g0001822 Lotus japonicus HOM05D005467 ORTHO05D006523 1.4e-168 596.7 419 68.7
Lalb_Chr21g0308561 Lupinus albus HOM05D005467 ORTHO05D006523 1.4e-168 596.7 412 69.9
arahy.Tifrunner.gnm1.ann1.F0PHAM Arachis hypogaea HOM05D005467 ORTHO05D006523 4.1e-168 595.1 449 65.7
ECA246G2902 Erigeron canadensis HOM05D005467 ORTHO05D006523 7.1e-168 594.3 417 69.5
CsaV3_5G034840 Cucumis sativus L. HOM05D005467 ORTHO05D006523 3.5e-167 592.0 419 68.7
CANSAT01G3134 Cannabis sativa HOM05D005467 ORTHO05D006523 6.0e-167 591.3 411 71.3
CAN.G1489.4 Capsicum annuum HOM05D005467 ORTHO05D006523 6.0e-167 591.3 420 69.8
Sopen05g004250 Solanum pennellii HOM05D005467 ORTHO05D006523 3.9e-166 588.6 412 70.4
Nitab4.5_0000350g0200 Nicotiana tabacum HOM05D005467 ORTHO05D006523 6.6e-166 587.8 408 70.6
DCAR_007277 Daucus carota HOM05D005467 ORTHO05D006523 1.1e-165 587.0 419 67.3
TPR.G4835 Trifolium pratense HOM05D005467 ORTHO05D006523 3.3e-165 585.5 419 68.0
Prupe.1G321400 Prunus persica HOM05D005467 ORTHO05D006523 1.4e-163 580.1 369 75.3
PSO063G5439 Papaver somniferum HOM05D005467 ORTHO05D006523 2.4e-163 579.3 421 66.7
Medtr1g108650 Medicago truncatula HOM05D005467 ORTHO05D006523 3.1e-163 578.9 419 66.3
FAN12G1869 Fragaria x ananassa HOM05D005467 ORTHO05D006523 6.8e-163 577.8 419 69.0
FAN12G3855 Fragaria x ananassa HOM05D005467 ORTHO05D006523 6.8e-163 577.8 419 69.0
Aqoxy3G00153 Aquilegia oxysepala HOM05D005467 ORTHO05D006523 1.2e-162 577.0 417 67.9
PSO782G0553 Papaver somniferum HOM05D005467 ORTHO05D006523 1.5e-162 576.6 425 66.4
ClCG05G022280 Citrullus lanatus HOM05D005467 ORTHO05D006523 6.4e-161 571.2 494 59.7
Atru.chr11.358 Acer truncatum HOM05D005467 ORTHO05D006523 7.8e-159 564.3 374 73.8
AUR62014129 Chenopodium quinoa HOM05D005467 ORTHO05D006523 3.9e-158 562.0 435 64.1
MBI10_g46301_MAGBIO Magnolia biondii HOM05D005467 ORTHO05D006523 3.9e-158 562.0 360 73.6
Solyc05g008420.4 Solanum lycopersicum HOM05D005467 ORTHO05D006523 5.1e-158 561.6 395 70.4
Psat6g222960 Pisum sativum HOM05D005467 ORTHO05D006523 7.3e-157 557.8 416 65.6
Ah.02g128100 Amaranthus hybridus HOM05D005467 ORTHO05D006523 4.7e-156 555.1 428 63.6
Duzib248G1088 Durio zibethinus HOM05D005467 ORTHO05D006523 1.9e-152 543.1 416 66.3
Os01g0506200 Oryza sativa ssp. japonica HOM05D005467 ORTHO05D006523 3.2e-152 542.3 401 65.3
Ca_11108_v3 Cicer arietinum L. HOM05D005467 ORTHO05D006523 6.6e-150 534.6 419 62.8
Dinv05879 Davidia involucrata HOM05D005467 ORTHO05D006523 6.6e-150 534.6 334 79.0
Hund24998 Selenicereus undatus HOM05D005467 ORTHO05D006523 1.8e-147 526.6 410 63.9
Cpa.g.sc65.104 Carica papaya HOM05D005467 ORTHO05D006523 2.0e-146 523.1 410 64.4
TAR622G1271 Trochodendron aralioides HOM05D005467 ORTHO05D006523 3.4e-146 522.3 341 73.6
MELO3C012295.2 Cucumis melo HOM05D005467 ORTHO05D006523 8.7e-142 507.7 363 68.9
Gohir.D04G138632 Gossypium hirsutum HOM05D005467 ORTHO05D006523 7.4e-141 504.6 350 70.9
unitig_21.g20024 Utricularia gibba HOM05D000903 ORTHO05D000731 6.9e-139 498.0 402 64.7
AUR62039552 Chenopodium quinoa HOM05D005467 ORTHO05D006523 1.8e-134 483.4 427 58.1
vmacro10622 Vaccinium macrocarpon HOM05D005467 ORTHO05D006523 1.5e-130 470.3 440 59.1
Nitab4.5_0004524g0030 Nicotiana tabacum HOM05D005467 ORTHO05D006523 4.5e-122 442.2 292 74.3
Sc04g0005780 Simmondsia chinensis HOM05D005467 ORTHO05D006523 1.7e-116 423.7 277 75.1
Cc11_g09130 Coffea canephora HOM05D005467 ORTHO05D006523 5.9e-114 415.2 275 71.6
Nitab4.5_0000293g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 5.9e-114 415.2 422 49.8
SMO172G0164 Selaginella moellendorffii HOM05D005467 ORTHO05D006523 1.0e-113 414.5 402 52.0
Gohir.D04G138566 Gossypium hirsutum HOM05D005467 ORTHO05D006523 1.3e-113 414.1 277 71.1
Lsat_1_v5_gn_3_54101 Lactuca sativa HOM05D005467 ORTHO05D006523 6.1e-111 405.2 276 71.4
ATR0041G011 Amborella trichopoda HOM05D005467 ORTHO05D006523 1.5e-109 400.6 406 50.0
Nitab4.5_0000350g0270 Nicotiana tabacum HOM05D005467 ORTHO05D006523 6.5e-105 385.2 423 48.2
AagrBONN_evm.TU.Sc2ySwM_344.4352 Anthoceros agrestis HOM05D005467 ORTHO05D006523 2.1e-103 380.2 410 48.5
Oeu064202.3 Olea europaea HOM05D005467 ORTHO05D006523 7.4e-101 371.7 274 70.1
HPP92_008650 Vanilla planifolia HOM05D005467 ORTHO05D006523 1.3e-97 360.9 278 62.2
Pp3c22_2590 Physcomitrium patens HOM05D005467 ORTHO05D006523 4.7e-95 352.4 401 45.9
Peaxi162Scf00159g00824 Petunia axillaris HOM05D005467 ORTHO05D006523 8.5e-89 331.6 557 37.7
Zm00001eb341680 Zea mays HOM05D005467 ORTHO05D006523 2.5e-88 330.1 317 53.6
CDE06G2222 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 1.4e-86 324.3 303 56.8
Sopen02g012020 Solanum pennellii HOM05D005467 ORTHO05D006523 2.3e-86 323.6 429 41.0
PGSC0003DMG400029189 Solanum tuberosum HOM05D005467 ORTHO05D006523 5.2e-86 322.4 426 41.3
Peaxi162Scf00159g00823 Petunia axillaris HOM05D005467 ORTHO05D006523 1.5e-85 320.9 466 40.3
CBR_g17592 Chara braunii HOM05D005467 ORTHO05D006523 4.4e-85 319.3 413 43.1
SEGI_12457 Sequoiadendron giganteum HOM05D005467 ORTHO05D006523 6.3e-84 315.5 265 61.1
Sopen02g012000 Solanum pennellii HOM05D005467 ORTHO05D006523 4.5e-82 309.3 416 40.6
PGSC0003DMG400017873 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.9e-81 306.6 420 40.0
Dinv04888 Davidia involucrata HOM05D005467 ORTHO05D006523 1.5e-80 304.3 201 75.1
Sopen02g012010 Solanum pennellii HOM05D005467 ORTHO05D006523 9.5e-80 301.6 426 39.7
Solyc02g038680.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.9e-72 277.3 415 39.8
FAN17G2566 Fragaria x ananassa HOM05D005467 ORTHO05D006523 4.9e-68 262.7 188 67.0
Solyc02g038670.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.2e-61 241.5 427 35.4
Solyc02g038650.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.4e-59 234.6 340 38.5
Cc11_g09120 Coffea canephora HOM05D005467 ORTHO05D006523 7.8e-58 228.8 152 74.3
Haze_11049 Corylus avellana HOM05D005467 ORTHO05D006523 1.4e-54 218.0 168 67.3
MCO12G173 Micromonas commoda HOM05D005467 ORTHO05D006523 2.3e-54 217.2 365 37.8
Haze_11050 Corylus avellana HOM05D005467 ORTHO05D006523 1.2e-53 214.9 200 56.5
PRCOL_00002109 Prasinoderma coloniale HOM05D005467 ORTHO05D006523 4.9e-52 209.5 390 34.6
Peaxi162Scf00205g00812 Petunia axillaris HOM05D005467 ORTHO05D006523 6.0e-50 202.6 405 32.8
PGSC0003DMG400029188 Solanum tuberosum HOM05D005467 ORTHO05D006523 7.3e-48 195.7 328 36.6
Sopen02g012080 Solanum pennellii HOM05D005467 ORTHO05D006523 5.8e-45 186.0 414 31.4
Lsat_1_v5_gn_3_86380 Lactuca sativa HOM05D005467 ORTHO05D006523 2.7e-42 177.2 117 75.2
Sed0021963 Sechium edule HOM05D005467 ORTHO05D006523 3.5e-42 176.8 273 42.1
Nitab4.5_0004524g0050 Nicotiana tabacum HOM05D005467 ORTHO05D006523 9.6e-40 168.7 116 67.2
RcHm_v2.0_Chr7g0235151 Rosa chinensis HOM05D005467 ORTHO05D006523 3.1e-38 163.7 104 76.0
Solyc02g038660.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 3.1e-38 163.7 329 33.4
Lsat_1_v5_gn_3_107041 Lactuca sativa HOM05D005467 ORTHO05D006523 4.0e-38 163.3 208 48.6
FAN17G1461 Fragaria x ananassa HOM05D005467 ORTHO05D006523 2.1e-34 151.0 112 64.3
Nitab4.5_0004367g0150 Nicotiana tabacum HOM05D005467 ORTHO05D006523 6.0e-34 149.4 133 52.6
PGSC0003DMG400023165 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.5e-32 144.8 182 42.9
Nitab4.5_0019054g0020 Nicotiana tabacum HOM05D005467 ORTHO05D006523 5.6e-32 142.9 276 35.1
Nitab4.5_0002820g0080 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.1e-31 141.0 122 53.3
Lsat_1_v5_gn_4_96160 Lactuca sativa HOM05D005467 ORTHO05D006523 3.6e-31 140.2 95 70.5
Lsat_1_v5_gn_7_58700 Lactuca sativa HOM05D005467 ORTHO05D006523 4.8e-31 139.8 95 70.5
PGSC0003DMG400017876 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.6e-29 134.0 206 37.4
RcHm_v2.0_Chr3g0493761 Rosa chinensis HOM05D005467 ORTHO05D006523 1.1e-27 128.6 85 72.9
Nitab4.5_0000688g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 3.2e-27 127.1 189 39.7
Solyc02g038700.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.2e-26 125.2 227 34.4
Nitab4.5_0002820g0070 Nicotiana tabacum HOM05D005467 ORTHO05D006523 6.0e-26 122.9 148 45.9
Lsat_1_v5_gn_6_22900 Lactuca sativa HOM05D005467 ORTHO05D006523 9.9e-21 105.5 76 69.7
Phvul.008G137000 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 6.4e-20 102.8 55 83.6
PGSC0003DMG400017875 Solanum tuberosum HOM05D005467 ORTHO05D006523 3.0e-17 94.0 77 55.8
CDE07G1108 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 2.8e-15 87.4 79 51.9
PGSC0003DMG400038827 Solanum tuberosum HOM05D005467 ORTHO05D006523 9.0e-14 82.4 104 36.5
SEGI_39271 Sequoiadendron giganteum HOM05D005467 ORTHO05D006523 1.6e-10 71.6 85 50.6
Cre12.g549600 Chlamydomonas reinhardtii HOM05D005467 ORTHO05D006523 2.1e-10 71.2 264 25.0
MD05G1282800 Malus domestica HOM05D005467 ORTHO05D006523 8.2e-07 59.3 180 28.3
Solyc02g062200.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.8e-06 58.2 83 38.6
arahy.Tifrunner.gnm1.ann1.68D7VA Arachis hypogaea HOM05D007334 ORTHO05D011873 6.9e-06 56.2 57 50.9
Lsat_1_v5_gn_9_124480 Lactuca sativa HOM05D001159 ORTHO05D001712 9.0e-06 55.8 44 52.3


User provided reference genes

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