Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00247 Erythranthe guttata HOM05D007332 ORTHO05D009297 8.2e-63 243.4 113 100.0
Migut.L00823 Erythranthe guttata HOM05D007332 ORTHO05D009297 8.2e-63 243.4 113 100.0
Migut.C01053 Erythranthe guttata HOM05D007332 ORTHO05D009297 2.3e-17 92.4 116 50.0
MSTRG.1422 Avicennia marina HOM05D007332 ORTHO05D009297 8.9e-17 90.5 125 47.2
Hma1.2p1_0542F.1_g174970 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 6.0e-13 77.8 121 41.3
Manes.02G166600 Manihot esculenta HOM05D007332 ORTHO05D009297 3.9e-12 75.1 128 40.6
SalBow7G3495 Salvia bowleyana HOM05D007332 ORTHO05D009297 3.9e-12 75.1 118 40.7
Ciclev10002610m.g Citrus clementina HOM05D007332 ORTHO05D009297 1.1e-11 73.6 135 37.8
QL09p033201 Quercus lobata HOM05D007332 ORTHO05D009297 1.5e-11 73.2 101 44.6
Peaxi162Scf00310g00043 Petunia axillaris HOM05D007332 ORTHO05D009297 1.9e-11 72.8 117 41.9
Atru.chr13.1537 Acer truncatum HOM05D007332 ORTHO05D009297 4.3e-11 71.6 128 39.1
SGA_v2.0_scaffold52G18934 Striga asiatica HOM05D007332 ORTHO05D009297 4.3e-11 71.6 120 39.2
PGSC0003DMG400024564 Solanum tuberosum HOM05D007332 ORTHO05D009297 9.5e-11 70.5 121 39.7
PGR044G1395 Punica granatum HOM05D007332 ORTHO05D009297 1.2e-10 70.1 126 42.9
Hma1.2p1_0542F.1_g175020 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 2.8e-10 68.9 120 40.0
Sabra02G0062700 Salix brachista HOM05D007332 ORTHO05D009297 2.8e-10 68.9 123 42.3
Cfa018560 Carpinus fangiana HOM05D007332 ORTHO05D009297 3.6e-10 68.6 101 42.6
Gohir.A06G046800 Gossypium hirsutum HOM05D007332 ORTHO05D009297 6.2e-10 67.8 131 40.5
Solyc03g113480.1 Solanum lycopersicum HOM05D007332 ORTHO05D009297 6.2e-10 67.8 124 40.3
Sopen03g032530 Solanum pennellii HOM05D007332 ORTHO05D009297 6.2e-10 67.8 121 39.7
FvH4_2g27560 Fragaria vesca HOM05D007332 ORTHO05D009297 2.3e-09 65.9 127 37.8
FAN15G1303 Fragaria x ananassa HOM05D007332 ORTHO05D009297 2.3e-09 65.9 127 37.8
FAN24G1344 Fragaria x ananassa HOM05D007332 ORTHO05D009297 2.3e-09 65.9 127 37.8
Nn5g28415 Nelumbo nucifera HOM05D007332 ORTHO05D009297 3.1e-09 65.5 126 38.9
Eucgr.F04333 Eucalyptus grandis HOM05D007332 ORTHO05D009297 5.2e-09 64.7 128 39.8
TWI34G0633 Tripterygium wilfordii HOM05D007332 ORTHO05D009297 5.2e-09 64.7 133 37.6
Cc10_g12430 Coffea canephora HOM05D007332 ORTHO05D009297 6.8e-09 64.3 131 39.7
CiPaw.15G033700 Carya illinoinensis HOM05D007332 ORTHO05D009297 1.2e-08 63.5 129 39.5
Potri.002G080200 Populus trichocarpa HOM05D007332 ORTHO05D009297 1.5e-08 63.2 143 35.7
Gohir.D05G239400 Gossypium hirsutum HOM05D007332 ORTHO05D009297 3.4e-08 62.0 132 37.1
FAN20G0761 Fragaria x ananassa HOM05D007332 ORTHO05D009297 4.4e-08 61.6 135 36.3
FAN27G1631 Fragaria x ananassa HOM05D007332 ORTHO05D009297 5.8e-08 61.2 129 37.2
Gohir.A05G237300 Gossypium hirsutum HOM05D007332 ORTHO05D009297 7.5e-08 60.8 132 35.6
Gorai.009G248200 Gossypium raimondii HOM05D007332 ORTHO05D009297 7.5e-08 60.8 132 35.6
arahy.Tifrunner.gnm1.ann1.34D5TH Arachis hypogaea HOM05D007332 ORTHO05D009297 1.3e-07 60.1 107 39.3
CAN.G1486.2 Capsicum annuum HOM05D007332 ORTHO05D009297 1.3e-07 60.1 136 39.0
CsaV3_4G028070 Cucumis sativus L. HOM05D007332 ORTHO05D009297 1.3e-07 60.1 103 33.0
RcHm_v2.0_Chr6g0296401 Rosa chinensis HOM05D007332 ORTHO05D009297 1.7e-07 59.7 127 35.4
Gorai.010G052700 Gossypium raimondii HOM05D007332 ORTHO05D009297 2.2e-07 59.3 130 37.7
TPR.G13457 Trifolium pratense HOM05D007332 ORTHO05D009297 2.2e-07 59.3 105 40.0
MBI06_g33108_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 3.7e-07 58.5 125 31.2
Medtr3g088400 Medicago truncatula HOM05D007332 ORTHO05D009297 3.7e-07 58.5 103 40.8
Potri.005G181200 Populus trichocarpa HOM05D007332 ORTHO05D009297 6.4e-07 57.8 122 32.0
MELO3C010504.2 Cucumis melo HOM05D007332 ORTHO05D009297 1.1e-06 57.0 112 37.5
DCAR_003566 Daucus carota HOM05D007332 ORTHO05D009297 1.9e-06 56.2 108 39.8
Glyma.04G246900 Glycine max HOM05D007332 ORTHO05D009297 1.9e-06 56.2 101 39.6
Lj1g0005314 Lotus japonicus HOM05D007332 ORTHO05D009297 2.4e-06 55.8 125 37.6
THA.LOC104813672 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 3.2e-06 55.5 70 45.7
Nitab4.5_0000111g0100 Nicotiana tabacum HOM05D007332 ORTHO05D009297 4.1e-06 55.1 131 32.8
arahy.Tifrunner.gnm1.ann1.396V4Q Arachis hypogaea HOM05D007332 ORTHO05D009297 5.4e-06 54.7 128 35.2
Ca_16594_v3 Cicer arietinum L. HOM05D007332 ORTHO05D009297 7.1e-06 54.3 123 36.6
Psat5g085840 Pisum sativum HOM05D007332 ORTHO05D009297 7.1e-06 54.3 128 37.5


User provided reference genes

Program Settings