Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00811 Erythranthe guttata HOM05D001343 ORTHO05D007223 6.9e-61 237.3 132 100.0
Migut.L00734 Erythranthe guttata HOM05D001343 ORTHO05D007223 5.8e-60 234.2 130 100.0
SalBow5G5069 Salvia bowleyana HOM05D001343 ORTHO05D007223 3.3e-55 218.4 132 90.9
SGA_v2.0_scaffold12G05990 Striga asiatica HOM05D001343 ORTHO05D007223 4.3e-55 218.0 132 90.2
Dinv40173 Davidia involucrata HOM05D001343 ORTHO05D007223 1.3e-54 216.5 132 89.4
MSTRG.15594 Avicennia marina HOM05D001343 ORTHO05D007223 6.9e-53 210.7 132 87.9
VMungo1215G1031 Vigna mungo HOM05D001343 ORTHO05D007223 3.4e-52 208.4 132 86.4
MD02G1119300 Malus domestica HOM05D001343 ORTHO05D007223 1.7e-51 206.1 132 86.4
Actinidia17384 Actinidia chinensis HOM05D001343 ORTHO05D007223 2.2e-51 205.7 132 87.1
Ca_24963_v3 Cicer arietinum L. HOM05D001343 ORTHO05D007223 3.8e-51 204.9 132 84.8
CsaV3_3G000380 Cucumis sativus L. HOM05D001343 ORTHO05D007223 8.4e-51 203.8 132 84.1
Prupe.7G179600 Prunus persica HOM05D001343 ORTHO05D007223 1.1e-50 203.4 132 85.6
QL06p053829 Quercus lobata HOM05D001343 ORTHO05D007223 1.1e-50 203.4 131 85.5
TPR.G25095 Trifolium pratense HOM05D001343 ORTHO05D007223 1.4e-50 203.0 132 84.1
Dinv08526 Davidia involucrata HOM05D001343 ORTHO05D007223 1.9e-50 202.6 132 84.1
Sabra05G0082500 Salix brachista HOM05D001343 ORTHO05D007223 4.2e-50 201.4 132 86.4
FvH4_1g10521 Fragaria vesca HOM05D001343 ORTHO05D007223 5.5e-50 201.1 132 84.1
FAN19G1061 Fragaria x ananassa HOM05D001343 ORTHO05D007223 5.5e-50 201.1 132 84.1
FAN23G1852 Fragaria x ananassa HOM05D001343 ORTHO05D007223 5.5e-50 201.1 132 84.1
Medtr5g023770 Medicago truncatula HOM05D001343 ORTHO05D007223 7.1e-50 200.7 133 83.5
CiPaw.07G004100 Carya illinoinensis HOM05D001343 ORTHO05D007223 9.3e-50 200.3 132 82.6
Haze_03675 Corylus avellana HOM05D001343 ORTHO05D007223 9.3e-50 200.3 132 83.3
Lalb_Chr05g0211921 Lupinus albus HOM05D001343 ORTHO05D007223 9.3e-50 200.3 130 84.6
QL06p052741 Quercus lobata HOM05D001343 ORTHO05D007223 9.3e-50 200.3 131 84.7
Potri.005G099800 Populus trichocarpa HOM05D001343 ORTHO05D007223 1.2e-49 199.9 132 85.6
Atru.chr3.956 Acer truncatum HOM05D001343 ORTHO05D007223 1.6e-49 199.5 132 84.1
FAN28G2189 Fragaria x ananassa HOM05D001343 ORTHO05D007223 2.1e-49 199.1 132 83.3
Aqoxy5G01035 Aquilegia oxysepala HOM05D001343 ORTHO05D007223 2.7e-49 198.7 127 84.3
MELO3C013733.2 Cucumis melo HOM05D001343 ORTHO05D007223 3.5e-49 198.4 133 83.5
MD15G1233300 Malus domestica HOM05D001343 ORTHO05D007223 4.6e-49 198.0 132 84.8
Manes.01G153700 Manihot esculenta HOM05D001343 ORTHO05D007223 4.6e-49 198.0 132 82.6
Phvul.002G114800 Phaseolus vulgaris HOM05D001343 ORTHO05D007223 4.6e-49 198.0 132 82.6
Hma1.2p1_0300F.1_g118160 Hydrangea macrophylla HOM05D001343 ORTHO05D007223 7.9e-49 197.2 132 81.8
Sopen02g027640 Solanum pennellii HOM05D001343 ORTHO05D007223 7.9e-49 197.2 132 83.3
TWI09G1271 Tripterygium wilfordii HOM05D001343 ORTHO05D007223 7.9e-49 197.2 132 84.1
Sed0023593 Sechium edule HOM05D001343 ORTHO05D007223 1.0e-48 196.8 131 82.4
RcHm_v2.0_Chr2g0097451 Rosa chinensis HOM05D001343 ORTHO05D007223 1.3e-48 196.4 133 83.5
Solyc02g082840.3 Solanum lycopersicum HOM05D001343 ORTHO05D007223 1.8e-48 196.1 132 82.6
Ciclev10024922m.g Citrus clementina HOM05D001343 ORTHO05D007223 2.3e-48 195.7 134 82.1
CAN.G890.76 Capsicum annuum HOM05D001343 ORTHO05D007223 3.0e-48 195.3 130 83.8
Duzib187G0329 Durio zibethinus HOM05D001343 ORTHO05D007223 8.7e-48 193.7 132 81.1
PGR083G0487 Punica granatum HOM05D001343 ORTHO05D007223 1.5e-47 193.0 132 81.8
ClCG10G000340 Citrullus lanatus HOM05D001343 ORTHO05D007223 2.5e-47 192.2 133 82.7
GSVIVG01003839001 Vitis vinifera HOM05D001343 ORTHO05D007223 3.3e-47 191.8 126 82.5
CSS0043948 Camellia sinensis var. sinensis HOM05D001343 ORTHO05D007223 7.4e-47 190.7 132 81.8
TAR381G1734 Trochodendron aralioides HOM05D001343 ORTHO05D007223 7.4e-47 190.7 126 84.9
HanXRQChr14g0442391 Helianthus annuus HOM05D001343 ORTHO05D007223 9.6e-47 190.3 133 80.5
Eucgr.J02528 Eucalyptus grandis HOM05D001343 ORTHO05D007223 1.6e-46 189.5 124 83.1
Lj2g0004784 Lotus japonicus HOM05D001343 ORTHO05D007223 2.8e-46 188.7 134 79.9
CANSAT25G0854 Cannabis sativa HOM05D001343 ORTHO05D007223 1.1e-45 186.8 133 80.5
CANSAT25G1453 Cannabis sativa HOM05D001343 ORTHO05D007223 3.1e-45 185.3 133 79.7
PSO170G3735 Papaver somniferum HOM05D001343 ORTHO05D007223 3.1e-45 185.3 133 77.4
PSO210G1702 Papaver somniferum HOM05D001343 ORTHO05D007223 3.1e-45 185.3 133 77.4
Actinidia22910 Actinidia chinensis HOM05D001343 ORTHO05D007223 5.3e-45 184.5 131 79.4
arahy.Tifrunner.gnm1.ann1.AU9Y8G Arachis hypogaea HOM05D001343 ORTHO05D007223 5.3e-45 184.5 132 76.5
arahy.Tifrunner.gnm1.ann1.SLQH96 Arachis hypogaea HOM05D001343 ORTHO05D007223 5.3e-45 184.5 132 76.5
Rhsim10G0198000 Rhododendron simsii HOM05D001343 ORTHO05D007223 1.5e-44 183.0 155 70.3
Hund03615 Selenicereus undatus HOM05D001343 ORTHO05D007223 2.6e-44 182.2 130 77.7
Glyma.11G084200 Glycine max HOM05D001343 ORTHO05D007223 3.4e-44 181.8 132 78.0
Carub.0008s2848 Capsella rubella HOM05D001343 ORTHO05D007223 7.6e-44 180.6 140 76.4
CARHR281730 Cardamine hirsuta HOM05D001343 ORTHO05D007223 7.6e-44 180.6 134 78.4
QL06p053793 Quercus lobata HOM05D001343 ORTHO05D007223 2.2e-43 179.1 136 77.9
Duzib147G0638 Durio zibethinus HOM05D001343 ORTHO05D007223 3.8e-43 178.3 132 76.5
THA.LOC104826465 Tarenaya hassleriana HOM05D001343 ORTHO05D007223 3.8e-43 178.3 132 78.8
CDE07G1064 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 1.1e-42 176.8 129 76.0
CDE06G1375 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 1.4e-42 176.4 129 75.2
AUR62003379 Chenopodium quinoa HOM05D001343 ORTHO05D007223 9.3e-42 173.7 130 76.2
EL10Ac6g15468 Beta vulgaris HOM05D001343 ORTHO05D007223 2.7e-41 172.2 130 74.6
Cc07_g11650 Coffea canephora HOM05D001343 ORTHO05D007223 6.0e-41 171.0 132 75.8
Sp2g30660 Schrenkiella parvula HOM05D001343 ORTHO05D007223 6.0e-41 171.0 140 72.9
AL8G45590 Arabidopsis lyrata HOM05D001343 ORTHO05D007223 7.9e-41 170.6 139 74.1
ATR0661G538 Amborella trichopoda HOM05D001343 ORTHO05D007223 1.0e-40 170.2 136 72.8
AT5G66030 Arabidopsis thaliana HOM05D001343 ORTHO05D007223 1.8e-40 169.5 138 73.9
Thecc.01G007100 Theobroma cacao HOM05D001343 ORTHO05D007223 1.8e-40 169.5 132 74.2
Manes.02G112700 Manihot esculenta HOM05D001343 ORTHO05D007223 3.0e-40 168.7 132 74.2
ECA238G2213 Erigeron canadensis HOM05D001343 ORTHO05D007223 1.9e-39 166.0 132 71.2
COL.COLO4_22537 Corchorus olitorius HOM05D001343 ORTHO05D007223 2.5e-39 165.6 133 73.7
unitig_88.g27773 Utricularia gibba HOM05D001343 ORTHO05D007223 3.3e-39 165.2 130 72.3
A09p10220 Brassica napus HOM05D001343 ORTHO05D002008 7.4e-39 164.1 107 85.0
Gohir.D10G089000 Gossypium hirsutum HOM05D001343 ORTHO05D007223 7.4e-39 164.1 133 72.2
Gorai.011G097900 Gossypium raimondii HOM05D001343 ORTHO05D007223 7.4e-39 164.1 133 72.2
BcaC04g23105 Brassica carinata HOM05D001343 ORTHO05D002008 1.3e-38 163.3 124 75.0
C09p12110 Brassica napus HOM05D001343 ORTHO05D002008 1.3e-38 163.3 124 75.0
BolC9t54101H Brassica oleracea HOM05D001343 ORTHO05D002008 1.3e-38 163.3 124 75.0
BraA09t36667Z Brassica rapa HOM05D001343 ORTHO05D002008 1.3e-38 163.3 119 77.3
Thhalv10003686m.g Eutrema salsugineum HOM05D001343 ORTHO05D007223 3.7e-38 161.8 138 71.0
BcaB04g20130 Brassica carinata HOM05D001343 ORTHO05D002008 6.3e-38 161.0 121 75.2
Gohir.A10G099100 Gossypium hirsutum HOM05D001343 ORTHO05D007223 6.3e-38 161.0 133 71.4
Os07g0472500 Oryza sativa ssp. japonica HOM05D001343 ORTHO05D007223 1.4e-37 159.8 131 71.0
Zm00001eb104860 Zea mays HOM05D001343 ORTHO05D007223 3.1e-37 158.7 131 70.2
SEGI_12448 Sequoiadendron giganteum HOM05D001343 ORTHO05D007223 2.2e-35 152.5 136 65.4
HPP92_003502 Vanilla planifolia HOM05D001343 ORTHO05D007223 5.5e-34 147.9 132 67.4
vmacro20524 Vaccinium macrocarpon HOM05D001343 ORTHO05D007223 7.2e-34 147.5 95 85.3
Psat2g150480 Pisum sativum HOM05D001343 ORTHO05D007223 1.2e-33 146.7 96 84.4
Cpa.g.sc55.186 Carica papaya HOM05D001343 ORTHO05D007223 3.6e-33 145.2 132 68.2
Pp3c20_18210 Physcomitrium patens HOM05D001343 ORTHO05D007223 7.4e-31 137.5 138 63.8
Pp3c23_9770 Physcomitrium patens HOM05D001343 ORTHO05D007223 2.8e-30 135.6 137 62.0
Mapoly0179s0009 Marchantia polymorpha HOM05D001343 ORTHO05D007223 3.7e-30 135.2 141 58.2
Nn5g30956 Nelumbo nucifera HOM05D001343 ORTHO05D007223 6.3e-30 134.4 88 84.1
Atru.chr3.968 Acer truncatum HOM05D001343 ORTHO05D007223 6.9e-29 131.0 77 87.0
Lsat_1_v5_gn_2_74420 Lactuca sativa HOM05D001343 ORTHO05D007223 6.9e-29 131.0 133 62.4
AagrBONN_evm.TU.Sc2ySwM_344.163 Anthoceros agrestis HOM05D001343 ORTHO05D007223 9.1e-29 130.6 131 61.8
Nitab4.5_0000702g0060 Nicotiana tabacum HOM05D001343 ORTHO05D007223 2.6e-28 129.0 132 61.4
Nitab4.5_0002967g0060 Nicotiana tabacum HOM05D001343 ORTHO05D007223 2.6e-28 129.0 132 61.4
Glyma.01G159900 Glycine max HOM05D001343 ORTHO05D007223 4.5e-28 128.3 133 61.7
DCAR_011583 Daucus carota HOM05D001343 ORTHO05D007223 2.2e-27 125.9 132 59.8
Lj4A232G45 Lonicera japonica HOM05D001343 ORTHO05D007223 2.2e-27 125.9 104 75.0
Peaxi162Scf01446g00025 Petunia axillaris HOM05D001343 ORTHO05D007223 1.2e-25 120.2 132 57.6
Sc16g0001690 Simmondsia chinensis HOM05D001343 ORTHO05D007223 2.1e-25 119.4 130 58.5
AUR62029449 Chenopodium quinoa HOM05D001343 ORTHO05D007223 2.6e-23 112.5 130 55.4
Ah.03g148390 Amaranthus hybridus HOM05D001343 ORTHO05D007223 4.4e-23 111.7 130 54.6
CBR_g34809 Chara braunii HOM05D000019 ORTHO05D000002 6.3e-22 107.8 133 54.1
RcHm_v2.0_Chr2g0097571 Rosa chinensis HOM05D001343 ORTHO05D007223 2.6e-20 102.4 66 86.4
arahy.Tifrunner.gnm1.ann1.6P6C0I Arachis hypogaea HOM05D001343 ORTHO05D007223 3.6e-17 92.0 95 63.2
HPP92_003508 Vanilla planifolia HOM05D001343 ORTHO05D007223 3.0e-16 89.0 56 87.5
arahy.Tifrunner.gnm1.ann1.T78FCF Arachis hypogaea HOM05D001343 ORTHO05D007223 4.4e-15 85.1 78 65.4
arahy.Tifrunner.gnm1.ann1.9PSP05 Arachis hypogaea HOM05D001343 ORTHO05D007223 8.2e-14 80.9 71 70.4
QL06p052753 Quercus lobata HOM05D003687 ORTHO05D007223 1.4e-13 80.1 55 74.5
arahy.Tifrunner.gnm1.ann1.ISY8LN Arachis hypogaea HOM05D001343 ORTHO05D007223 5.3e-13 78.2 54 79.6
RcHm_v2.0_Chr2g0097561 Rosa chinensis HOM05D001343 ORTHO05D007223 4.2e-10 68.6 47 76.6
Lsat_1_v5_gn_4_84780 Lactuca sativa HOM05D003172 ORTHO05D007223 6.1e-09 64.7 52 73.1
Cre09.g398808 Chlamydomonas reinhardtii HOM05D001343 ORTHO05D007223 1.2e-07 60.5 87 41.4


User provided reference genes

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